RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SUGT1Q9Y2Z0 365 aa18.58■□□□□ 0.56
USB1-214ENST00000568848 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.58■□□□□ 0.56
USB1-214ENST00000568848 GNRH1P01148 92 aa18.57■□□□□ 0.56
USB1-214ENST00000568848 INHAP05111 366 aa18.57■□□□□ 0.56
USB1-214ENST00000568848 LDHBP07195 334 aaKnown RBP18.57■□□□□ 0.56
USB1-214ENST00000568848 FLT3LGP49771 235 aa18.57■□□□□ 0.56
USB1-214ENST00000568848 PRMT2P55345 433 aa18.57■□□□□ 0.56
USB1-214ENST00000568848 FCGRTP55899 365 aa18.57■□□□□ 0.56
USB1-214ENST00000568848 DIS3LQ8TF46 1054 aaKnown RBP18.57■□□□□ 0.56
USB1-214ENST00000568848 PARK7Q99497 189 aaKnown RBP18.57■□□□□ 0.56
USB1-214ENST00000568848 RFX7Q2KHR2 1363 aa18.56■□□□□ 0.56
USB1-214ENST00000568848 TRIM75PA6NK02 468 aa18.56■□□□□ 0.56
USB1-214ENST00000568848 ADCY3O60266 1144 aa18.56■□□□□ 0.56
USB1-214ENST00000568848 PTPRAP18433 802 aa18.56■□□□□ 0.56
USB1-214ENST00000568848 SCYL3Q8IZE3 742 aa18.56■□□□□ 0.56
USB1-214ENST00000568848 CDCA7LQ96GN5 454 aa18.56■□□□□ 0.56
USB1-214ENST00000568848 LRCH3Q96II8 777 aa18.56■□□□□ 0.56
USB1-214ENST00000568848 PRO3102Q9H379 93 aa18.56■□□□□ 0.56
USB1-214ENST00000568848 DOCK1Q14185 1865 aa18.56■□□□□ 0.56
USB1-214ENST00000568848 KIF16BQ96L93 1317 aa18.55■□□□□ 0.56
USB1-214ENST00000568848 A0A0G2JLL6 359 aaPredicted RBP18.55■□□□□ 0.56
USB1-214ENST00000568848 ZBTB7BO15156 539 aaPredicted RBP18.55■□□□□ 0.56
USB1-214ENST00000568848 PEX10O60683 326 aa18.55■□□□□ 0.56
USB1-214ENST00000568848 HOXD10P28358 340 aa18.55■□□□□ 0.56
USB1-214ENST00000568848 TREML2Q5T2D2 321 aa18.55■□□□□ 0.56
USB1-214ENST00000568848 PRRT2Q7Z6L0 340 aaPredicted RBP18.55■□□□□ 0.56
USB1-214ENST00000568848 ZSCAN29Q8IWY8 852 aaPredicted RBP18.55■□□□□ 0.56
USB1-214ENST00000568848 DEFB118Q96PH6 123 aa18.55■□□□□ 0.56
USB1-214ENST00000568848 PTPRCP08575 1304 aa18.54■□□□□ 0.56
USB1-214ENST00000568848 TRIM32Q13049 653 aa18.54■□□□□ 0.56
USB1-214ENST00000568848 ANKRD13CQ8N6S4 541 aa18.54■□□□□ 0.56
USB1-214ENST00000568848 AFG3L2Q9Y4W6 797 aa18.54■□□□□ 0.56
USB1-214ENST00000568848 LRRFIP2Q9Y608 721 aaKnown RBP18.54■□□□□ 0.56
USB1-214ENST00000568848 CXCL11O14625 94 aa18.53■□□□□ 0.56
USB1-214ENST00000568848 TNPO2O14787 897 aaKnown RBP18.53■□□□□ 0.56
USB1-214ENST00000568848 TIMM10P62072 90 aa18.53■□□□□ 0.56
USB1-214ENST00000568848 UBXN2AP68543 259 aa18.53■□□□□ 0.56
USB1-214ENST00000568848 RASGRF1Q13972 1273 aa18.53■□□□□ 0.56
USB1-214ENST00000568848 RRP1BQ14684 758 aaKnown RBP18.53■□□□□ 0.56
USB1-214ENST00000568848 PI16Q6UXB8 463 aa18.53■□□□□ 0.56
USB1-214ENST00000568848 SLAIN1Q8ND83 568 aa18.53■□□□□ 0.56
USB1-214ENST00000568848 ZNF384Q8TF68 577 aa18.53■□□□□ 0.56
USB1-214ENST00000568848 PICK1Q9NRD5 415 aa18.53■□□□□ 0.56
USB1-214ENST00000568848 ABCF2Q9UG63 623 aa18.53■□□□□ 0.56
USB1-214ENST00000568848 STAP2Q9UGK3 403 aa18.53■□□□□ 0.56
USB1-214ENST00000568848 SGPL1O95470 568 aa18.52■□□□□ 0.56
USB1-214ENST00000568848 BTDP43251 543 aa18.52■□□□□ 0.56
USB1-214ENST00000568848 CCDC102BQ68D86 513 aa18.52■□□□□ 0.56
USB1-214ENST00000568848 CEP126Q9P2H0 1117 aa18.52■□□□□ 0.56
USB1-214ENST00000568848 GAKO14976 1311 aa18.51■□□□□ 0.55
USB1-214ENST00000568848 TFRCP02786 760 aaKnown RBP18.51■□□□□ 0.55
USB1-214ENST00000568848 NKX2-3Q8TAU0 364 aa18.51■□□□□ 0.55
USB1-214ENST00000568848 PAWRQ96IZ0 340 aaKnown RBP18.51■□□□□ 0.55
USB1-214ENST00000568848 HTATIP2Q9BUP3 242 aa18.51■□□□□ 0.55
USB1-214ENST00000568848 SMC4Q9NTJ3 1288 aa18.51■□□□□ 0.55
USB1-214ENST00000568848 UBTFL1P0CB47 393 aaPredicted RBP18.5■□□□□ 0.55
USB1-214ENST00000568848 SHROOM1Q2M3G4 852 aaPredicted RBP18.5■□□□□ 0.55
USB1-214ENST00000568848 TBC1D9Q6ZT07 1266 aa18.5■□□□□ 0.55
USB1-214ENST00000568848 DZIP1Q86YF9 867 aaKnown RBP18.5■□□□□ 0.55
USB1-214ENST00000568848 SMCR8Q8TEV9 937 aaPredicted RBP18.5■□□□□ 0.55
USB1-214ENST00000568848 MEIS3Q99687 375 aa18.5■□□□□ 0.55
USB1-214ENST00000568848 IDI2Q9BXS1 227 aa18.5■□□□□ 0.55
USB1-214ENST00000568848 DENND2AQ9ULE3 1009 aa18.5■□□□□ 0.55
USB1-214ENST00000568848 ZMYND8Q9ULU4 1186 aaPredicted RBP18.5■□□□□ 0.55
USB1-214ENST00000568848 SALL1Q9NSC2 1324 aa18.49■□□□□ 0.55
USB1-214ENST00000568848 A0A0C4DFX4 3053 aa18.49■□□□□ 0.55
USB1-214ENST00000568848 EVI5O60447 810 aa18.49■□□□□ 0.55
USB1-214ENST00000568848 ENTPD3O75355 529 aa18.49■□□□□ 0.55
USB1-214ENST00000568848 GNL3LQ9NVN8 582 aaKnown RBP18.49■□□□□ 0.55
USB1-214ENST00000568848 ATAD5Q96QE3 1844 aa18.49■□□□□ 0.55
USB1-214ENST00000568848 ZNF316A6NFI3 1004 aaPredicted RBP18.48■□□□□ 0.55
USB1-214ENST00000568848 CIAO1O76071 339 aa18.48■□□□□ 0.55
USB1-214ENST00000568848 RHBDL3P58872 404 aa18.48■□□□□ 0.55
USB1-214ENST00000568848 MECOMQ03112 1051 aa18.48■□□□□ 0.55
USB1-214ENST00000568848 FASTKD5Q7L8L6 764 aaKnown RBP18.48■□□□□ 0.55
USB1-214ENST00000568848 NOB1Q9ULX3 412 aaKnown RBP18.48■□□□□ 0.55
USB1-214ENST00000568848 SYN1P17600 705 aa18.47■□□□□ 0.55
USB1-214ENST00000568848 SLFN5Q08AF3 891 aa18.47■□□□□ 0.55
USB1-214ENST00000568848 TFCP2Q12800 502 aa18.47■□□□□ 0.55
USB1-214ENST00000568848 SPP2Q13103 211 aa18.47■□□□□ 0.55
USB1-214ENST00000568848 C7orf61Q8IZ16 206 aa18.47■□□□□ 0.55
USB1-214ENST00000568848 PAK6Q9NQU5 681 aaPredicted RBP18.47■□□□□ 0.55
USB1-214ENST00000568848 AGTPBP1Q9UPW5 1226 aa18.47■□□□□ 0.55
USB1-214ENST00000568848 TNNQ9UQP3 1299 aa18.47■□□□□ 0.55
USB1-214ENST00000568848 NR2E3Q9Y5X4 410 aa18.47■□□□□ 0.55
USB1-214ENST00000568848 MROH7-TTC4A0A0A0MT08 1334 aa18.47■□□□□ 0.55
USB1-214ENST00000568848 PLXNB2O15031 1838 aa18.46■□□□□ 0.55
USB1-214ENST00000568848 LOC285556D6RIA3 1793 aa18.46■□□□□ 0.55
USB1-214ENST00000568848 HMGCS2P54868 508 aa18.46■□□□□ 0.55
USB1-214ENST00000568848 JAG1P78504 1218 aa18.46■□□□□ 0.55
USB1-214ENST00000568848 XAGE2Q96GT9 111 aa18.46■□□□□ 0.55
USB1-214ENST00000568848 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.46■□□□□ 0.55
USB1-214ENST00000568848 SIPA1L1O43166 1804 aa18.46■□□□□ 0.55
USB1-214ENST00000568848 CUL9Q8IWT3 2517 aa18.45■□□□□ 0.54
USB1-214ENST00000568848 A0A1B0GUL7 405 aa18.45■□□□□ 0.54
USB1-214ENST00000568848 IL15P40933 162 aaPredicted RBP18.45■□□□□ 0.54
USB1-214ENST00000568848 MAP3K10Q02779 954 aa18.45■□□□□ 0.54
USB1-214ENST00000568848 Q7L0L9 218 aa18.45■□□□□ 0.54
USB1-214ENST00000568848 SLC17A8Q8NDX2 589 aa18.45■□□□□ 0.54
USB1-214ENST00000568848 DDX60LQ5H9U9 1706 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms