RNA–Protein interactions for RNA: ENST00000568745.5

SNAP23-219, Transcript of synaptosome associated protein 23, human

TSL 5

Gene SNAP23, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAP23-219	ENST00000568745	GSX1	Q9H4S2	264 aa	Predicted RBP	5.24	□□□□□ -1.57
SNAP23-219	ENST00000568745	PCDHA4	Q9UN74	947 aa		5.24	□□□□□ -1.57
SNAP23-219	ENST00000568745	TLR6	Q9Y2C9	796 aa		5.24	□□□□□ -1.57
SNAP23-219	ENST00000568745	HIF3A	Q9Y2N7	669 aa		5.24	□□□□□ -1.57
SNAP23-219	ENST00000568745	SYNGAP1	Q96PV0	1343 aa		5.23	□□□□□ -1.57
SNAP23-219	ENST00000568745	DCDC2C	A8MYV0	355 aa		5.23	□□□□□ -1.57
SNAP23-219	ENST00000568745	HCLS1	P14317	486 aa	Predicted RBP	5.23	□□□□□ -1.57
SNAP23-219	ENST00000568745	CDK8	P49336	464 aa		5.23	□□□□□ -1.57
SNAP23-219	ENST00000568745	SEPT6	Q14141	434 aa		5.23	□□□□□ -1.57
SNAP23-219	ENST00000568745	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	5.23	□□□□□ -1.57
SNAP23-219	ENST00000568745	AGMO	Q6ZNB7	445 aa		5.23	□□□□□ -1.57
SNAP23-219	ENST00000568745	C12orf40	Q86WS4	652 aa		5.23	□□□□□ -1.57
SNAP23-219	ENST00000568745	SHISA5	Q8N114	240 aa		5.23	□□□□□ -1.57
SNAP23-219	ENST00000568745	NOC4L	Q9BVI4	516 aa	Known RBP	5.23	□□□□□ -1.57
SNAP23-219	ENST00000568745	SEMA6C	Q9H3T2	930 aa		5.23	□□□□□ -1.57
SNAP23-219	ENST00000568745	ACSS3	Q9H6R3	686 aa		5.23	□□□□□ -1.57
SNAP23-219	ENST00000568745	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	DYNC1LI2	O43237	492 aa	Predicted RBP	5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	RNGTT	O60942	597 aa	Known RBP	5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	IGLV1-40	P01703	118 aa		5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	TFE3	P19532	575 aa	Predicted RBP	5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	LMNB1	P20700	586 aa		5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	NFIA	Q12857	509 aa		5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	INPP5A	Q14642	412 aa		5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	TTLL4	Q14679	1199 aa		5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	PPM1J	Q5JR12	505 aa		5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	LDLRAD1	Q5T700	205 aa		5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	RNF43	Q68DV7	783 aa		5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	PHC3	Q8NDX5	983 aa		5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	EZH1	Q92800	747 aa	Predicted RBP	5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	GAL3ST3	Q96A11	431 aa		5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	MFSD14A	Q96MC6	490 aa		5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	YIPF2	Q9BWQ6	316 aa		5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	ATXN3L	Q9H3M9	355 aa		5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	DAGLA	Q9Y4D2	1042 aa		5.22	□□□□□ -1.57
SNAP23-219	ENST00000568745	NEFM	P07197	916 aa		5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	ADM	P35318	185 aa		5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	ITGAE	P38570	1179 aa		5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	RPS26	P62854	115 aa	Known RBP	5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	HNRNPU	Q00839	825 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	LRFN4	Q6PJG9	635 aa		5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	PAOX	Q6QHF9	649 aa		5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	FBXL6	Q8N531	539 aa		5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	TMEM87A	Q8NBN3	555 aa		5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	JARID2	Q92833	1246 aa	Predicted RBP	5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	ZNF428	Q96B54	188 aa		5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	KRTAP4-7	Q9BYR0	210 aa		5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	BACH2	Q9BYV9	841 aa		5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	BCL11A	Q9H165	835 aa		5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	PIDD1	Q9HB75	910 aa		5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	COPRS	Q9NQ92	184 aa		5.21	□□□□□ -1.58
SNAP23-219	ENST00000568745	MINDY4B	A8MYZ0	360 aa		5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	WDR64	B1ANS9	1081 aa		5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	RLBP1	P12271	317 aa		5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	GBP2	P32456	591 aa	Predicted RBP	5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	ERVK-24	P63145	666 aa		5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	MAP7	Q14244	749 aa		5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	TSNAXIP1	Q2TAA8	658 aa		5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	SCARA3	Q6AZY7	606 aa		5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	RELL1	Q8IUW5	271 aa		5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	SMYD4	Q8IYR2	804 aa	Predicted RBP	5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	RNF214	Q8ND24	703 aa		5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	ISL2	Q96A47	359 aa		5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	ELMO3	Q96BJ8	720 aa		5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	PLPPR2	Q96GM1	343 aa		5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	DBNDD2	Q9BQY9	259 aa		5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	SSU72	Q9NP77	194 aa	Known RBP	5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	PICK1	Q9NRD5	415 aa		5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	PRKAG2	Q9UGJ0	569 aa		5.2	□□□□□ -1.58
SNAP23-219	ENST00000568745	UNCX	A6NJT0	531 aa		5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	PF4	P02776	101 aa		5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	F13B	P05160	661 aa		5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	RBM25	P49756	843 aa	Known RBP	5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	FAM160A1	Q05DH4	1040 aa		5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	RING1	Q06587	406 aa		5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	WIPI1	Q5MNZ9	446 aa	Predicted RBP	5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	SEZ6L2	Q6UXD5	910 aa		5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	UBE3D	Q7Z6J8	389 aa		5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	SHKBP1	Q8TBC3	707 aa		5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	TBC1D32	Q96NH3	1257 aa		5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	TMEM74	Q96NL1	305 aa		5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	RSRP1	Q9BUV0	290 aa		5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	MIR1-1HG	Q9H1L0	117 aa		5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	C1GALT1	Q9NS00	363 aa		5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	KBTBD4	Q9NVX7	518 aa		5.19	□□□□□ -1.58
SNAP23-219	ENST00000568745	PRAMEF27	A3QJZ7	478 aa		5.18	□□□□□ -1.58
SNAP23-219	ENST00000568745	GSC2	O15499	205 aa		5.18	□□□□□ -1.58
SNAP23-219	ENST00000568745	NTF4	P34130	210 aa		5.18	□□□□□ -1.58
SNAP23-219	ENST00000568745	CDK5R2	Q13319	367 aa		5.18	□□□□□ -1.58
SNAP23-219	ENST00000568745	CAMK2G	Q13555	558 aa	Predicted RBP	5.18	□□□□□ -1.58
SNAP23-219	ENST00000568745	ZMYM1	Q5SVZ6	1142 aa		5.18	□□□□□ -1.58
SNAP23-219	ENST00000568745	ZBTB37	Q5TC79	503 aa		5.18	□□□□□ -1.58
SNAP23-219	ENST00000568745	BNC2	Q6ZN30	1099 aa	Predicted RBP	5.18	□□□□□ -1.58
SNAP23-219	ENST00000568745	CYFIP1	Q7L576	1253 aa		5.18	□□□□□ -1.58
SNAP23-219	ENST00000568745	ERMP1	Q7Z2K6	904 aa		5.18	□□□□□ -1.58
SNAP23-219	ENST00000568745	HDX	Q7Z353	690 aa		5.18	□□□□□ -1.58
SNAP23-219	ENST00000568745	ZDHHC13	Q8IUH4	622 aa		5.18	□□□□□ -1.58
SNAP23-219	ENST00000568745	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
SNAP23-219	ENST00000568745	GATA6	Q92908	595 aa		5.18	□□□□□ -1.58
SNAP23-219	ENST00000568745	GGT7	Q9UJ14	662 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms