RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 FTSJ3Q8IY81 847 aaKnown RBP7.79□□□□□ -1.16
CAPN3-218ENST00000568153 PANK1Q8TE04 598 aa7.79□□□□□ -1.16
CAPN3-218ENST00000568153 CEP63Q96MT8 703 aa7.79□□□□□ -1.16
CAPN3-218ENST00000568153 OXCT2Q9BYC2 517 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-218ENST00000568153 ANO2Q9NQ90 1003 aa7.79□□□□□ -1.16
CAPN3-218ENST00000568153 STRN4Q9NRL3 753 aa7.79□□□□□ -1.16
CAPN3-218ENST00000568153 LRRC4BQ9NT99 713 aa7.79□□□□□ -1.16
CAPN3-218ENST00000568153 STIM2Q9P246 746 aa7.79□□□□□ -1.16
CAPN3-218ENST00000568153 MAP3K5Q99683 1374 aa7.79□□□□□ -1.16
CAPN3-218ENST00000568153 ZBTB39O15060 712 aa7.78□□□□□ -1.16
CAPN3-218ENST00000568153 RNMTO43148 476 aaKnown RBP7.78□□□□□ -1.16
CAPN3-218ENST00000568153 MICAL2O94851 1124 aa7.78□□□□□ -1.16
CAPN3-218ENST00000568153 BMP4P12644 408 aa7.78□□□□□ -1.16
CAPN3-218ENST00000568153 PIP4K2BP78356 416 aa7.78□□□□□ -1.16
CAPN3-218ENST00000568153 MAP3K10Q02779 954 aa7.78□□□□□ -1.16
CAPN3-218ENST00000568153 TEFQ10587 303 aa7.78□□□□□ -1.16
CAPN3-218ENST00000568153 FAM182BQ5T319 152 aa7.78□□□□□ -1.16
CAPN3-218ENST00000568153 MPRIPQ6WCQ1 1025 aa7.78□□□□□ -1.16
CAPN3-218ENST00000568153 TREML1Q86YW5 311 aa7.78□□□□□ -1.16
CAPN3-218ENST00000568153 CHMP4BQ9H444 224 aaKnown RBP7.78□□□□□ -1.16
CAPN3-218ENST00000568153 BRD7Q9NPI1 651 aa7.78□□□□□ -1.16
CAPN3-218ENST00000568153 SOS1Q07889 1333 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-218ENST00000568153 KIF16BQ96L93 1317 aa7.78□□□□□ -1.16
CAPN3-218ENST00000568153 USP54Q70EL1 1684 aa7.77□□□□□ -1.17
CAPN3-218ENST00000568153 BTBD11A6QL63 1104 aa7.77□□□□□ -1.17
CAPN3-218ENST00000568153 UBAP1LF5GYI3 381 aa7.77□□□□□ -1.17
CAPN3-218ENST00000568153 OIP5O43482 229 aa7.77□□□□□ -1.17
CAPN3-218ENST00000568153 HSP90AB1P08238 724 aaKnown RBP7.77□□□□□ -1.17
CAPN3-218ENST00000568153 CD33P20138 364 aa7.77□□□□□ -1.17
CAPN3-218ENST00000568153 GSK3AP49840 483 aa7.77□□□□□ -1.17
CAPN3-218ENST00000568153 IDH3AP50213 366 aa7.77□□□□□ -1.17
CAPN3-218ENST00000568153 KCNA1Q09470 495 aa7.77□□□□□ -1.17
CAPN3-218ENST00000568153 SFSWAPQ12872 951 aaKnown RBP7.77□□□□□ -1.17
CAPN3-218ENST00000568153 C1orf229Q6ZS94 237 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-218ENST00000568153 IFNL2Q8IZJ0 200 aa7.77□□□□□ -1.17
CAPN3-218ENST00000568153 CARD10Q9BWT7 1032 aa7.77□□□□□ -1.17
CAPN3-218ENST00000568153 API5Q9BZZ5 524 aaKnown RBP7.77□□□□□ -1.17
CAPN3-218ENST00000568153 GNEQ9Y223 722 aaKnown RBP7.77□□□□□ -1.17
CAPN3-218ENST00000568153 WDR17Q8IZU2 1322 aa7.77□□□□□ -1.17
CAPN3-218ENST00000568153 MED1Q15648 1581 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-218ENST00000568153 TRPM3Q9HCF6 1732 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-218ENST00000568153 TCERG1O14776 1098 aaKnown RBP7.76□□□□□ -1.17
CAPN3-218ENST00000568153 RLBP1P12271 317 aa7.76□□□□□ -1.17
CAPN3-218ENST00000568153 TRIM27P14373 513 aa7.76□□□□□ -1.17
CAPN3-218ENST00000568153 MPSTP25325 297 aa7.76□□□□□ -1.17
CAPN3-218ENST00000568153 GRNP28799 593 aaKnown RBP7.76□□□□□ -1.17
CAPN3-218ENST00000568153 INPP5BP32019 993 aa7.76□□□□□ -1.17
CAPN3-218ENST00000568153 MVPQ14764 893 aaKnown RBP7.76□□□□□ -1.17
CAPN3-218ENST00000568153 GRIN2CQ14957 1233 aa7.76□□□□□ -1.17
CAPN3-218ENST00000568153 CCDC30Q5VVM6 783 aa7.76□□□□□ -1.17
CAPN3-218ENST00000568153 ILDR2Q71H61 639 aa7.76□□□□□ -1.17
CAPN3-218ENST00000568153 ZCRB1Q8TBF4 217 aaKnown RBP7.76□□□□□ -1.17
CAPN3-218ENST00000568153 EGFL7Q9UHF1 273 aa7.76□□□□□ -1.17
CAPN3-218ENST00000568153 GDF2Q9UK05 429 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-218ENST00000568153 DDX19BQ9UMR2 479 aa7.76□□□□□ -1.17
CAPN3-218ENST00000568153 OPLAHO14841 1288 aa7.75□□□□□ -1.17
CAPN3-218ENST00000568153 ARAFP10398 606 aa7.75□□□□□ -1.17
CAPN3-218ENST00000568153 PHKG2P15735 406 aa7.75□□□□□ -1.17
CAPN3-218ENST00000568153 EIF4A1P60842 406 aaKnown RBP7.75□□□□□ -1.17
CAPN3-218ENST00000568153 FKBP4Q02790 459 aaKnown RBP eCLIP7.75□□□□□ -1.17
CAPN3-218ENST00000568153 SF3B2Q13435 895 aaKnown RBP7.75□□□□□ -1.17
CAPN3-218ENST00000568153 LAMC2Q13753 1193 aa7.75□□□□□ -1.17
CAPN3-218ENST00000568153 KRT24Q2M2I5 525 aa7.75□□□□□ -1.17
CAPN3-218ENST00000568153 DCAF5Q96JK2 942 aa7.75□□□□□ -1.17
CAPN3-218ENST00000568153 STK31Q9BXU1 1019 aa7.75□□□□□ -1.17
CAPN3-218ENST00000568153 RWDD1Q9H446 243 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-218ENST00000568153 BTG4Q9NY30 223 aa7.75□□□□□ -1.17
CAPN3-218ENST00000568153 TNNQ9UQP3 1299 aa7.75□□□□□ -1.17
CAPN3-218ENST00000568153 IVNS1ABPQ9Y6Y0 642 aa7.75□□□□□ -1.17
CAPN3-218ENST00000568153 CEMIPQ8WUJ3 1361 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 SHISA8B8ZZ34 492 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 H3BRB1 525 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 ICMTO60725 284 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 HOXB7P09629 217 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 IL2RBP14784 551 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 NPR3P17342 541 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 ZAP70P43403 619 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 ARSDP51689 593 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 KCNQ4P56696 695 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 KCNMA1Q12791 1236 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 SLCO4C1Q6ZQN7 724 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 CENPQQ7L2Z9 268 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-218ENST00000568153 ATCAYQ86WG3 371 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 ITPRIPQ8IWB1 547 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 TMEM57Q8N5G2 664 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 GOLGA6L1Q8N7Z2 621 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 TUT1Q9H6E5 874 aaKnown RBP7.74□□□□□ -1.17
CAPN3-218ENST00000568153 ENAMQ9NRM1 1142 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 MARK1Q9P0L2 795 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 KLF15Q9UIH9 416 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 GGA1Q9UJY5 639 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 USP20Q9Y2K6 914 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 NCAPD2Q15021 1401 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 RGPD1P0DJD0 1748 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 LTBP4Q8N2S1 1624 aa7.74□□□□□ -1.17
CAPN3-218ENST00000568153 ALS2Q96Q42 1657 aa7.73□□□□□ -1.17
CAPN3-218ENST00000568153 PLEKHG2Q9H7P9 1386 aa7.73□□□□□ -1.17
CAPN3-218ENST00000568153 MARF1Q9Y4F3 1742 aaKnown RBP7.73□□□□□ -1.17
CAPN3-218ENST00000568153 EIF1AXP47813 144 aaKnown RBP7.73□□□□□ -1.17
CAPN3-218ENST00000568153 CABP4P57796 275 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms