RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 WDHD1O75717 1129 aaPredicted RBP14.66□□□□□ -0.06
SF3B3-208ENST00000567250 NFIAQ12857 509 aa14.66□□□□□ -0.06
SF3B3-208ENST00000567250 PICALMQ13492 652 aa14.66□□□□□ -0.06
SF3B3-208ENST00000567250 C2orf69Q8N8R5 385 aa14.66□□□□□ -0.06
SF3B3-208ENST00000567250 SH3RF3Q8TEJ3 882 aaPredicted RBP14.66□□□□□ -0.06
SF3B3-208ENST00000567250 RIOK1Q9BRS2 568 aaKnown RBP14.66□□□□□ -0.06
SF3B3-208ENST00000567250 GBA2Q9HCG7 927 aaPredicted RBP14.66□□□□□ -0.06
SF3B3-208ENST00000567250 SCAF8Q9UPN6 1271 aaKnown RBP14.66□□□□□ -0.06
SF3B3-208ENST00000567250 MYH8P13535 1937 aa14.66□□□□□ -0.06
SF3B3-208ENST00000567250 HIP1O00291 1037 aa14.65□□□□□ -0.06
SF3B3-208ENST00000567250 PPP1R12BO60237 982 aaPredicted RBP14.65□□□□□ -0.06
SF3B3-208ENST00000567250 USP5P45974 858 aa14.65□□□□□ -0.06
SF3B3-208ENST00000567250 DYNLL1P63167 89 aaKnown RBP14.65□□□□□ -0.06
SF3B3-208ENST00000567250 TCP10Q12799 353 aa14.65□□□□□ -0.06
SF3B3-208ENST00000567250 DCAF15Q66K64 600 aa14.65□□□□□ -0.06
SF3B3-208ENST00000567250 ZSCAN29Q8IWY8 852 aaPredicted RBP14.65□□□□□ -0.06
SF3B3-208ENST00000567250 DDRGK1Q96HY6 314 aa14.65□□□□□ -0.06
SF3B3-208ENST00000567250 TMEM39BQ9GZU3 492 aa14.65□□□□□ -0.06
SF3B3-208ENST00000567250 FAM198AQ9UFP1 575 aa14.65□□□□□ -0.06
SF3B3-208ENST00000567250 FLT1P17948 1338 aa14.65□□□□□ -0.06
SF3B3-208ENST00000567250 BAZ2AQ9UIF9 1905 aaKnown RBP14.64□□□□□ -0.07
SF3B3-208ENST00000567250 MBD4O95243 580 aa14.64□□□□□ -0.07
SF3B3-208ENST00000567250 TTLL12Q14166 644 aaPredicted RBP14.64□□□□□ -0.07
SF3B3-208ENST00000567250 ARMC9Q7Z3E5 817 aa14.64□□□□□ -0.07
SF3B3-208ENST00000567250 OSBPL5Q9H0X9 879 aaPredicted RBP14.64□□□□□ -0.07
SF3B3-208ENST00000567250 DHX36Q9H2U1 1008 aaKnown RBP14.64□□□□□ -0.07
SF3B3-208ENST00000567250 DDX4Q9NQI0 724 aaKnown RBP14.64□□□□□ -0.07
SF3B3-208ENST00000567250 ABT1Q9ULW3 272 aaKnown RBP14.64□□□□□ -0.07
SF3B3-208ENST00000567250 SIPA1L1O43166 1804 aa14.64□□□□□ -0.07
SF3B3-208ENST00000567250 HLA-DOAP06340 250 aa14.63□□□□□ -0.07
SF3B3-208ENST00000567250 GSPT1P15170 499 aaKnown RBP14.63□□□□□ -0.07
SF3B3-208ENST00000567250 GNAT2P19087 354 aa14.63□□□□□ -0.07
SF3B3-208ENST00000567250 FMR1Q06787 632 aaKnown RBP eCLIP14.63□□□□□ -0.071e-6■■□□□ 14.1
SF3B3-208ENST00000567250 PRAMEF18Q5VWM3 479 aa14.63□□□□□ -0.07
SF3B3-208ENST00000567250 AMOTL1Q8IY63 956 aa14.63□□□□□ -0.07
SF3B3-208ENST00000567250 LCORLQ8N3X6 602 aa14.63□□□□□ -0.07
SF3B3-208ENST00000567250 TGFBRAP1Q8WUH2 860 aa14.63□□□□□ -0.07
SF3B3-208ENST00000567250 TEPSINQ96N21 525 aa14.63□□□□□ -0.07
SF3B3-208ENST00000567250 CSRNP1Q96S65 589 aa14.63□□□□□ -0.07
SF3B3-208ENST00000567250 ARMT1Q9H993 441 aa14.63□□□□□ -0.07
SF3B3-208ENST00000567250 DIAPH3Q9NSV4 1193 aa14.63□□□□□ -0.07
SF3B3-208ENST00000567250 ATAD5Q96QE3 1844 aa14.63□□□□□ -0.07
SF3B3-208ENST00000567250 DOCK1Q14185 1865 aa14.63□□□□□ -0.07
SF3B3-208ENST00000567250 IREB2P48200 963 aaKnown RBP14.62□□□□□ -0.07
SF3B3-208ENST00000567250 ZMYM1Q5SVZ6 1142 aa14.62□□□□□ -0.07
SF3B3-208ENST00000567250 NBPF12Q5TAG4 269 aaPredicted RBP14.62□□□□□ -0.07
SF3B3-208ENST00000567250 CST9Q5W186 159 aa14.62□□□□□ -0.07
SF3B3-208ENST00000567250 MAPKAPK5Q8IW41 473 aa14.62□□□□□ -0.07
SF3B3-208ENST00000567250 PUS7LQ9H0K6 701 aaKnown RBP14.62□□□□□ -0.07
SF3B3-208ENST00000567250 HELLSQ9NRZ9 838 aa14.62□□□□□ -0.07
SF3B3-208ENST00000567250 ATP8A2Q9NTI2 1148 aa14.62□□□□□ -0.07
SF3B3-208ENST00000567250 TLL2Q9Y6L7 1015 aa14.62□□□□□ -0.07
SF3B3-208ENST00000567250 GPAA1O43292 621 aa14.61□□□□□ -0.07
SF3B3-208ENST00000567250 MFAP1P55081 439 aaKnown RBP14.61□□□□□ -0.07
SF3B3-208ENST00000567250 DLK2Q6UY11 383 aa14.61□□□□□ -0.07
SF3B3-208ENST00000567250 HHIPL1Q96JK4 782 aa14.61□□□□□ -0.07
SF3B3-208ENST00000567250 THSD7BQ9C0I4 1608 aa14.61□□□□□ -0.07
SF3B3-208ENST00000567250 UNCXA6NJT0 531 aa14.6□□□□□ -0.07
SF3B3-208ENST00000567250 SDSP20132 328 aa14.6□□□□□ -0.07
SF3B3-208ENST00000567250 HUNKP57058 714 aa14.6□□□□□ -0.07
SF3B3-208ENST00000567250 MAP3K11Q16584 847 aa14.6□□□□□ -0.07
SF3B3-208ENST00000567250 BMP2KLQ5H9B9 411 aa14.6□□□□□ -0.07
SF3B3-208ENST00000567250 TTC6Q86TZ1 520 aa14.6□□□□□ -0.07
SF3B3-208ENST00000567250 SAPCD2Q86UD0 394 aa14.6□□□□□ -0.07
SF3B3-208ENST00000567250 OSBP2Q969R2 916 aa14.6□□□□□ -0.07
SF3B3-208ENST00000567250 TRIM34Q9BYJ4 488 aa14.6□□□□□ -0.07
SF3B3-208ENST00000567250 ZNF341Q9BYN7 854 aa14.6□□□□□ -0.07
SF3B3-208ENST00000567250 HERC5Q9UII4 1024 aaKnown RBP14.6□□□□□ -0.07
SF3B3-208ENST00000567250 ANGEL1Q9UNK9 670 aaKnown RBP14.6□□□□□ -0.07
SF3B3-208ENST00000567250 SLC4A4Q9Y6R1 1079 aa14.6□□□□□ -0.07
SF3B3-208ENST00000567250 RAD50Q92878 1312 aa14.6□□□□□ -0.07
SF3B3-208ENST00000567250 LAMA4Q16363 1823 aa14.59□□□□□ -0.07
SF3B3-208ENST00000567250 DDTLA6NHG4 134 aaPredicted RBP14.59□□□□□ -0.07
SF3B3-208ENST00000567250 RASSF10A6NK89 507 aa14.59□□□□□ -0.07
SF3B3-208ENST00000567250 M0R2C6 588 aa14.59□□□□□ -0.07
SF3B3-208ENST00000567250 CHGBP05060 677 aa14.59□□□□□ -0.07
SF3B3-208ENST00000567250 PRKG1Q13976 671 aa14.59□□□□□ -0.07
SF3B3-208ENST00000567250 SLFNL1Q499Z3 407 aa14.59□□□□□ -0.07
SF3B3-208ENST00000567250 ANKRD13AQ8IZ07 590 aa14.59□□□□□ -0.07
SF3B3-208ENST00000567250 CRACR2BQ8N4Y2 399 aaPredicted RBP14.59□□□□□ -0.07
SF3B3-208ENST00000567250 SDR42E1Q8WUS8 393 aa14.59□□□□□ -0.07
SF3B3-208ENST00000567250 NACAP1Q9BZK3 213 aa14.59□□□□□ -0.07
SF3B3-208ENST00000567250 DCP1AQ9NPI6 582 aaPredicted RBP14.59□□□□□ -0.07
SF3B3-208ENST00000567250 PI4KBQ9UBF8 816 aa14.59□□□□□ -0.07
SF3B3-208ENST00000567250 ARPP21Q9UBL0 812 aaPredicted RBP14.59□□□□□ -0.07
SF3B3-208ENST00000567250 TAOK2Q9UL54 1235 aa14.59□□□□□ -0.07
SF3B3-208ENST00000567250 A0A0D9SFI3 127 aa14.58□□□□□ -0.08
SF3B3-208ENST00000567250 ECE1P42892 770 aa14.58□□□□□ -0.08
SF3B3-208ENST00000567250 NMIQ13287 307 aaPredicted RBP14.58□□□□□ -0.08
SF3B3-208ENST00000567250 MCMDC2Q4G0Z9 681 aa14.58□□□□□ -0.08
SF3B3-208ENST00000567250 GIMAP6Q6P9H5 292 aa14.58□□□□□ -0.08
SF3B3-208ENST00000567250 PAXIP1Q6ZW49 1069 aaPredicted RBP14.58□□□□□ -0.08
SF3B3-208ENST00000567250 CDAN1Q8IWY9 1227 aa14.58□□□□□ -0.08
SF3B3-208ENST00000567250 ZFPM1Q8IX07 1006 aa14.58□□□□□ -0.08
SF3B3-208ENST00000567250 RUFY2Q8WXA3 655 aa14.58□□□□□ -0.08
SF3B3-208ENST00000567250 STRBPQ96SI9 672 aaKnown RBP14.58□□□□□ -0.08
SF3B3-208ENST00000567250 EHD4Q9H223 541 aa14.58□□□□□ -0.08
SF3B3-208ENST00000567250 MCM9Q9NXL9 1143 aa14.58□□□□□ -0.08
SF3B3-208ENST00000567250 CSADQ9Y600 493 aa14.58□□□□□ -0.08
SF3B3-208ENST00000567250 CCDC171Q6TFL3 1326 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 872.7 ms