RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 FDPSP14324 419 aaKnown RBP27.17■■□□□ 1.94
LINC00543-201ENST00000567234 CCDC183Q5T5S1 534 aa27.17■■□□□ 1.94
LINC00543-201ENST00000567234 ATL3Q6DD88 541 aa27.17■■□□□ 1.94
LINC00543-201ENST00000567234 ZSWIM5Q9P217 1185 aa27.17■■□□□ 1.94
LINC00543-201ENST00000567234 PRDM4Q9UKN5 801 aa27.17■■□□□ 1.94
LINC00543-201ENST00000567234 SYCE3A1L190 88 aa27.16■■□□□ 1.94
LINC00543-201ENST00000567234 CPLX1O14810 134 aa27.16■■□□□ 1.94
LINC00543-201ENST00000567234 HOXA10P31260 410 aaPredicted RBP27.16■■□□□ 1.94
LINC00543-201ENST00000567234 TTC6Q86TZ1 520 aa27.16■■□□□ 1.94
LINC00543-201ENST00000567234 ZNF384Q8TF68 577 aa27.16■■□□□ 1.94
LINC00543-201ENST00000567234 CFAP45Q9UL16 551 aa27.16■■□□□ 1.94
LINC00543-201ENST00000567234 PPARAQ07869 468 aa27.16■■□□□ 1.94
LINC00543-201ENST00000567234 APOA5Q6Q788 366 aa27.16■■□□□ 1.94
LINC00543-201ENST00000567234 LY9Q9HBG7 655 aa27.16■■□□□ 1.94
LINC00543-201ENST00000567234 KLRG2A4D1S0 409 aaPredicted RBP27.15■■□□□ 1.94
LINC00543-201ENST00000567234 BBOX1O75936 387 aa27.15■■□□□ 1.94
LINC00543-201ENST00000567234 CDKL5O76039 1030 aa27.15■■□□□ 1.94
LINC00543-201ENST00000567234 PCP11498 1178 aaKnown RBP27.15■■□□□ 1.94
LINC00543-201ENST00000567234 MECOMQ03112 1051 aa27.15■■□□□ 1.94
LINC00543-201ENST00000567234 TMEM67Q5HYA8 995 aa27.15■■□□□ 1.94
LINC00543-201ENST00000567234 TXNRD3Q86VQ6 643 aa27.15■■□□□ 1.94
LINC00543-201ENST00000567234 NKX2-3Q8TAU0 364 aa27.15■■□□□ 1.94
LINC00543-201ENST00000567234 KDM4AO75164 1064 aa27.14■■□□□ 1.94
LINC00543-201ENST00000567234 SART3Q15020 963 aaKnown RBP27.14■■□□□ 1.94
LINC00543-201ENST00000567234 FAM173BQ6P4H8 233 aa27.14■■□□□ 1.94
LINC00543-201ENST00000567234 WDR66Q8TBY9 1149 aa27.14■■□□□ 1.94
LINC00543-201ENST00000567234 SPATA32Q96LK8 384 aa27.14■■□□□ 1.94
LINC00543-201ENST00000567234 TACC3Q9Y6A5 838 aa27.14■■□□□ 1.94
LINC00543-201ENST00000567234 METAP2P50579 478 aaKnown RBP eCLIP27.13■■□□□ 1.93
LINC00543-201ENST00000567234 CPLX2Q6PUV4 134 aaKnown RBP27.13■■□□□ 1.93
LINC00543-201ENST00000567234 TMTC2Q8N394 836 aa27.13■■□□□ 1.93
LINC00543-201ENST00000567234 TDRD7Q8NHU6 1098 aaKnown RBP27.13■■□□□ 1.93
LINC00543-201ENST00000567234 LEO1Q8WVC0 666 aaPredicted RBP27.13■■□□□ 1.93
LINC00543-201ENST00000567234 CRAMP1Q96RY5 1269 aa27.13■■□□□ 1.93
LINC00543-201ENST00000567234 BAZ2AQ9UIF9 1905 aaKnown RBP27.13■■□□□ 1.93
LINC00543-201ENST00000567234 NID2Q14112 1375 aa27.13■■□□□ 1.93
LINC00543-201ENST00000567234 UTP14CQ5TAP6 766 aaKnown RBP27.13■■□□□ 1.93
LINC00543-201ENST00000567234 ZNF804AQ7Z570 1209 aa27.13■■□□□ 1.93
LINC00543-201ENST00000567234 SDR42E1Q8WUS8 393 aa27.13■■□□□ 1.93
LINC00543-201ENST00000567234 ORC3Q9UBD5 711 aaPredicted RBP27.13■■□□□ 1.93
LINC00543-201ENST00000567234 IFIT3O14879 490 aaKnown RBP27.12■■□□□ 1.93
LINC00543-201ENST00000567234 ZBTB43O43298 467 aa27.12■■□□□ 1.93
LINC00543-201ENST00000567234 ATP2B4P23634 1241 aa27.12■■□□□ 1.93
LINC00543-201ENST00000567234 DUOX1Q9NRD9 1551 aa27.12■■□□□ 1.93
LINC00543-201ENST00000567234 UQCRHLA0A096LP55 91 aa27.11■■□□□ 1.93
LINC00543-201ENST00000567234 UQCRHP07919 91 aa27.11■■□□□ 1.93
LINC00543-201ENST00000567234 RCAN1P53805 252 aa27.11■■□□□ 1.93
LINC00543-201ENST00000567234 CHAF1AQ13111 956 aaPredicted RBP27.11■■□□□ 1.93
LINC00543-201ENST00000567234 TMC4Q7Z404 712 aa27.11■■□□□ 1.93
LINC00543-201ENST00000567234 SLC51AQ86UW1 340 aa27.11■■□□□ 1.93
LINC00543-201ENST00000567234 INCENPQ9NQS7 918 aa27.11■■□□□ 1.93
LINC00543-201ENST00000567234 R3HCC1Q9Y3T6 440 aaKnown RBP27.11■■□□□ 1.93
LINC00543-201ENST00000567234 PARP3Q9Y6F1 533 aa27.11■■□□□ 1.93
LINC00543-201ENST00000567234 DYNLL1P63167 89 aaKnown RBP27.11■■□□□ 1.93
LINC00543-201ENST00000567234 NFXL1Q6ZNB6 911 aa27.11■■□□□ 1.93
LINC00543-201ENST00000567234 C8orf76Q96K31 380 aa27.1■■□□□ 1.93
LINC00543-201ENST00000567234 CRNKL1Q9BZJ0 848 aaKnown RBP27.1■■□□□ 1.93
LINC00543-201ENST00000567234 PODXL2Q9NZ53 605 aa27.1■■□□□ 1.93
LINC00543-201ENST00000567234 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.1■■□□□ 1.93
LINC00543-201ENST00000567234 TFIP11Q9UBB9 837 aaKnown RBP27.1■■□□□ 1.93
LINC00543-201ENST00000567234 LRRC37AA6NMS7 1700 aa27.09■■□□□ 1.93
LINC00543-201ENST00000567234 CCDC69A6NI79 296 aa27.09■■□□□ 1.93
LINC00543-201ENST00000567234 FGRP09769 529 aa27.09■■□□□ 1.93
LINC00543-201ENST00000567234 PRDX5P30044 214 aa27.09■■□□□ 1.93
LINC00543-201ENST00000567234 FBXO18Q8NFZ0 1043 aa27.09■■□□□ 1.93
LINC00543-201ENST00000567234 ESR2Q92731 530 aa27.09■■□□□ 1.93
LINC00543-201ENST00000567234 ZNF396Q96N95 335 aaPredicted RBP27.09■■□□□ 1.93
LINC00543-201ENST00000567234 RBSNQ9H1K0 784 aa27.09■■□□□ 1.93
LINC00543-201ENST00000567234 ATP8A2Q9NTI2 1148 aa27.09■■□□□ 1.93
LINC00543-201ENST00000567234 SLC12A7Q9Y666 1083 aa27.09■■□□□ 1.93
LINC00543-201ENST00000567234 LAMB1P07942 1786 aa27.09■■□□□ 1.93
LINC00543-201ENST00000567234 ERICH2A1L162 156 aa27.09■■□□□ 1.93
LINC00543-201ENST00000567234 ADD1P35611 737 aaKnown RBP27.09■■□□□ 1.93
LINC00543-201ENST00000567234 GPSM2P81274 684 aa27.09■■□□□ 1.93
LINC00543-201ENST00000567234 SYNE3Q6ZMZ3 975 aa27.09■■□□□ 1.93
LINC00543-201ENST00000567234 TSPY26PQ9H489 355 aa27.09■■□□□ 1.93
LINC00543-201ENST00000567234 MINDY4BA8MYZ0 360 aa27.08■■□□□ 1.93
LINC00543-201ENST00000567234 MYH2Q9UKX2 1941 aa27.08■■□□□ 1.93
LINC00543-201ENST00000567234 GOLGA6L4A6NEF3 574 aa27.07■■□□□ 1.92
LINC00543-201ENST00000567234 WTAPQ15007 396 aa27.07■■□□□ 1.92
LINC00543-201ENST00000567234 RRP12Q5JTH9 1297 aaKnown RBP27.07■■□□□ 1.92
LINC00543-201ENST00000567234 DZIP1Q86YF9 867 aaKnown RBP27.07■■□□□ 1.92
LINC00543-201ENST00000567234 SENP2Q9HC62 589 aa27.07■■□□□ 1.92
LINC00543-201ENST00000567234 TOMM22Q9NS69 142 aa27.07■■□□□ 1.92
LINC00543-201ENST00000567234 GGA1Q9UJY5 639 aa27.07■■□□□ 1.92
LINC00543-201ENST00000567234 COL11A2P13942 1736 aaPredicted RBP27.07■■□□□ 1.92
LINC00543-201ENST00000567234 GOLGA8AA7E2F4 631 aa27.06■■□□□ 1.92
LINC00543-201ENST00000567234 RCOR1Q9UKL0 485 aa27.06■■□□□ 1.92
LINC00543-201ENST00000567234 LDHBP07195 334 aaKnown RBP27.06■■□□□ 1.92
LINC00543-201ENST00000567234 GSTO1P78417 241 aa27.06■■□□□ 1.92
LINC00543-201ENST00000567234 MICU3Q86XE3 530 aa27.06■■□□□ 1.92
LINC00543-201ENST00000567234 PRIMPOLQ96LW4 560 aa27.06■■□□□ 1.92
LINC00543-201ENST00000567234 STK36Q9NRP7 1315 aa27.05■■□□□ 1.92
LINC00543-201ENST00000567234 CDC27P30260 824 aa27.05■■□□□ 1.92
LINC00543-201ENST00000567234 NTRK3Q16288 839 aa27.05■■□□□ 1.92
LINC00543-201ENST00000567234 SBK1Q52WX2 424 aa27.05■■□□□ 1.92
LINC00543-201ENST00000567234 CTR9Q6PD62 1173 aa27.05■■□□□ 1.92
LINC00543-201ENST00000567234 RAB11FIP4Q86YS3 637 aa27.05■■□□□ 1.92
LINC00543-201ENST00000567234 LTBP1Q14766 1721 aa27.05■■□□□ 1.92
LINC00543-201ENST00000567234 UFL1O94874 794 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms