RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 NAV1Q8NEY1 1877 aa18.32■□□□□ 0.52
KNOP1-203ENST00000565844 SGSM2O43147 1006 aa18.31■□□□□ 0.52
KNOP1-203ENST00000565844 LBX1P52954 281 aa18.31■□□□□ 0.52
KNOP1-203ENST00000565844 MFAP1P55081 439 aaKnown RBP18.31■□□□□ 0.52
KNOP1-203ENST00000565844 C8orf34Q49A92 452 aa18.31■□□□□ 0.52
KNOP1-203ENST00000565844 ZNF589Q86UQ0 364 aaPredicted RBP18.31■□□□□ 0.52
KNOP1-203ENST00000565844 CERS3Q8IU89 383 aa18.31■□□□□ 0.52
KNOP1-203ENST00000565844 SH3RF3Q8TEJ3 882 aaPredicted RBP18.31■□□□□ 0.52
KNOP1-203ENST00000565844 DCPSQ96C86 337 aaKnown RBP18.31■□□□□ 0.52
KNOP1-203ENST00000565844 PRMT6Q96LA8 375 aaPredicted RBP18.31■□□□□ 0.52
KNOP1-203ENST00000565844 PLCG2P16885 1265 aa18.3■□□□□ 0.52
KNOP1-203ENST00000565844 ECE1P42892 770 aa18.3■□□□□ 0.52
KNOP1-203ENST00000565844 PPP4CP60510 307 aa18.3■□□□□ 0.52
KNOP1-203ENST00000565844 STRBPQ96SI9 672 aaKnown RBP18.3■□□□□ 0.52
KNOP1-203ENST00000565844 TSKSQ9UJT2 592 aa18.3■□□□□ 0.52
KNOP1-203ENST00000565844 WNT10BO00744 389 aa18.3■□□□□ 0.52
KNOP1-203ENST00000565844 MYO1BO43795 1136 aa18.3■□□□□ 0.52
KNOP1-203ENST00000565844 CTCFP49711 727 aaPredicted RBP18.3■□□□□ 0.52
KNOP1-203ENST00000565844 RHBDL3P58872 404 aa18.3■□□□□ 0.52
KNOP1-203ENST00000565844 ANGEL2Q5VTE6 544 aaKnown RBP18.3■□□□□ 0.52
KNOP1-203ENST00000565844 CDC42EP5Q6NZY7 148 aa18.3■□□□□ 0.52
KNOP1-203ENST00000565844 ZBED3Q96IU2 234 aaPredicted RBP18.3■□□□□ 0.52
KNOP1-203ENST00000565844 CRNKL1Q9BZJ0 848 aaKnown RBP18.3■□□□□ 0.52
KNOP1-203ENST00000565844 TDRD3Q9H7E2 651 aaKnown RBP18.3■□□□□ 0.52
KNOP1-203ENST00000565844 USP40Q9NVE5 1235 aa18.3■□□□□ 0.52
KNOP1-203ENST00000565844 BAZ2AQ9UIF9 1905 aaKnown RBP18.29■□□□□ 0.52
KNOP1-203ENST00000565844 NBPF9Q3BBW0 867 aa18.29■□□□□ 0.52
KNOP1-203ENST00000565844 TEX11Q8IYF3 940 aa18.29■□□□□ 0.52
KNOP1-203ENST00000565844 SLC4A4Q9Y6R1 1079 aa18.29■□□□□ 0.52
KNOP1-203ENST00000565844 CASP8AP2Q9UKL3 1982 aa18.28■□□□□ 0.52
KNOP1-203ENST00000565844 DDX60LQ5H9U9 1706 aaKnown RBP18.28■□□□□ 0.52
KNOP1-203ENST00000565844 CLRN2A0PK11 232 aa18.28■□□□□ 0.52
KNOP1-203ENST00000565844 HSPA8P11142 646 aaKnown RBP18.28■□□□□ 0.52
KNOP1-203ENST00000565844 GNAT2P19087 354 aa18.28■□□□□ 0.52
KNOP1-203ENST00000565844 HUNKP57058 714 aa18.28■□□□□ 0.52
KNOP1-203ENST00000565844 MAP2K1Q02750 393 aaPredicted RBP18.28■□□□□ 0.52
KNOP1-203ENST00000565844 KIAA1211Q6ZU35 1233 aa18.28■□□□□ 0.52
KNOP1-203ENST00000565844 TMOD2Q9NZR1 351 aa18.28■□□□□ 0.52
KNOP1-203ENST00000565844 MYH1P12882 1939 aa18.27■□□□□ 0.52
KNOP1-203ENST00000565844 LAMB1P07942 1786 aa18.27■□□□□ 0.52
KNOP1-203ENST00000565844 PRKAB2O43741 272 aa18.27■□□□□ 0.51
KNOP1-203ENST00000565844 APPP05067 770 aa18.27■□□□□ 0.51
KNOP1-203ENST00000565844 USP5P45974 858 aa18.27■□□□□ 0.51
KNOP1-203ENST00000565844 CACNB3P54284 484 aa18.27■□□□□ 0.51
KNOP1-203ENST00000565844 SPDYE2Q495Y8 402 aa18.27■□□□□ 0.51
KNOP1-203ENST00000565844 VPS53Q5VIR6 699 aa18.27■□□□□ 0.51
KNOP1-203ENST00000565844 SULF1Q8IWU6 871 aa18.27■□□□□ 0.51
KNOP1-203ENST00000565844 SDR42E1Q8WUS8 393 aa18.27■□□□□ 0.51
KNOP1-203ENST00000565844 ZIC5Q96T25 663 aa18.27■□□□□ 0.51
KNOP1-203ENST00000565844 ANO2Q9NQ90 1003 aa18.27■□□□□ 0.51
KNOP1-203ENST00000565844 ZNF70Q9UC06 446 aaPredicted RBP18.27■□□□□ 0.51
KNOP1-203ENST00000565844 REC8O95072 547 aa18.26■□□□□ 0.51
KNOP1-203ENST00000565844 PICALMQ13492 652 aa18.26■□□□□ 0.51
KNOP1-203ENST00000565844 PRAMEF18Q5VWM3 479 aa18.26■□□□□ 0.51
KNOP1-203ENST00000565844 TGFBRAP1Q8WUH2 860 aa18.26■□□□□ 0.51
KNOP1-203ENST00000565844 CDCA5Q96FF9 252 aa18.26■□□□□ 0.51
KNOP1-203ENST00000565844 VEZTQ9HBM0 779 aa18.26■□□□□ 0.51
KNOP1-203ENST00000565844 GBA2Q9HCG7 927 aaPredicted RBP18.26■□□□□ 0.51
KNOP1-203ENST00000565844 LAMA4Q16363 1823 aa18.26■□□□□ 0.51
KNOP1-203ENST00000565844 GSG1L2A8MUP6 293 aa18.25■□□□□ 0.51
KNOP1-203ENST00000565844 WDHD1O75717 1129 aaPredicted RBP18.25■□□□□ 0.51
KNOP1-203ENST00000565844 HSPD1P10809 573 aaKnown RBP18.25■□□□□ 0.51
KNOP1-203ENST00000565844 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
KNOP1-203ENST00000565844 PATL2C9JE40 543 aaKnown RBP18.24■□□□□ 0.51
KNOP1-203ENST00000565844 FOXP2O15409 715 aa18.24■□□□□ 0.51
KNOP1-203ENST00000565844 PTH1RQ03431 593 aa18.24■□□□□ 0.51
KNOP1-203ENST00000565844 NFIAQ12857 509 aa18.24■□□□□ 0.51
KNOP1-203ENST00000565844 MAPKAPK5Q8IW41 473 aa18.24■□□□□ 0.51
KNOP1-203ENST00000565844 BEGAINQ9BUH8 593 aa18.24■□□□□ 0.51
KNOP1-203ENST00000565844 DSCC1Q9BVC3 393 aa18.24■□□□□ 0.51
KNOP1-203ENST00000565844 IDI2Q9BXS1 227 aa18.24■□□□□ 0.51
KNOP1-203ENST00000565844 NACAP1Q9BZK3 213 aa18.24■□□□□ 0.51
KNOP1-203ENST00000565844 PRDM10Q9NQV6 1147 aa18.24■□□□□ 0.51
KNOP1-203ENST00000565844 FLT1P17948 1338 aa18.24■□□□□ 0.51
KNOP1-203ENST00000565844 RPAP1Q9BWH6 1393 aaPredicted RBP18.24■□□□□ 0.51
KNOP1-203ENST00000565844 TCP10L2B9ZVM9 353 aa18.23■□□□□ 0.51
KNOP1-203ENST00000565844 EIF5BO60841 1220 aaKnown RBP18.23■□□□□ 0.51
KNOP1-203ENST00000565844 TDO2P48775 406 aa18.23■□□□□ 0.51
KNOP1-203ENST00000565844 C2orf69Q8N8R5 385 aa18.23■□□□□ 0.51
KNOP1-203ENST00000565844 LSG1Q9H089 658 aaKnown RBP18.23■□□□□ 0.51
KNOP1-203ENST00000565844 EPB41L4AQ9HCS5 686 aaPredicted RBP18.23■□□□□ 0.51
KNOP1-203ENST00000565844 DDX4Q9NQI0 724 aaKnown RBP18.23■□□□□ 0.51
KNOP1-203ENST00000565844 ATP8A2Q9NTI2 1148 aa18.23■□□□□ 0.51
KNOP1-203ENST00000565844 SEC24BO95487 1268 aa18.22■□□□□ 0.51
KNOP1-203ENST00000565844 TCP10Q12799 353 aa18.22■□□□□ 0.51
KNOP1-203ENST00000565844 MOB2Q70IA6 237 aa18.22■□□□□ 0.51
KNOP1-203ENST00000565844 IFNL3Q8IZI9 196 aa18.22■□□□□ 0.51
KNOP1-203ENST00000565844 DCP1AQ9NPI6 582 aaPredicted RBP18.22■□□□□ 0.51
KNOP1-203ENST00000565844 FAM198AQ9UFP1 575 aa18.22■□□□□ 0.51
KNOP1-203ENST00000565844 TNFAIP1Q13829 316 aa18.21■□□□□ 0.51
KNOP1-203ENST00000565844 FKBP1CQ5VVH2 108 aa18.21■□□□□ 0.51
KNOP1-203ENST00000565844 GIMAP6Q6P9H5 292 aa18.21■□□□□ 0.51
KNOP1-203ENST00000565844 APOBEC3FQ8IUX4 373 aaKnown RBP18.21■□□□□ 0.51
KNOP1-203ENST00000565844 HHIPL1Q96JK4 782 aa18.21■□□□□ 0.51
KNOP1-203ENST00000565844 BACH2Q9BYV9 841 aa18.21■□□□□ 0.51
KNOP1-203ENST00000565844 OSBPL5Q9H0X9 879 aaPredicted RBP18.21■□□□□ 0.51
KNOP1-203ENST00000565844 NAPBQ9H115 298 aa18.21■□□□□ 0.51
KNOP1-203ENST00000565844 MCM9Q9NXL9 1143 aa18.21■□□□□ 0.51
KNOP1-203ENST00000565844 SAP30BPQ9UHR5 308 aaKnown RBP18.21■□□□□ 0.51
KNOP1-203ENST00000565844 PAPPA2Q9BXP8 1791 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms