RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 RBM8AQ9Y5S9 174 aaKnown RBP9.28□□□□□ -0.92
CDH1-208ENST00000565810 SCN9AQ15858 1988 aa9.28□□□□□ -0.92
CDH1-208ENST00000565810 FLT1P17948 1338 aa9.28□□□□□ -0.92
CDH1-208ENST00000565810 MINDY4BA8MYZ0 360 aa9.27□□□□□ -0.93
CDH1-208ENST00000565810 USP17L12C9JPN9 530 aa9.27□□□□□ -0.93
CDH1-208ENST00000565810 USP17L21D6R901 530 aa9.27□□□□□ -0.93
CDH1-208ENST00000565810 ZKSCAN1P17029 563 aaPredicted RBP9.27□□□□□ -0.93
CDH1-208ENST00000565810 HIRAP54198 1017 aaPredicted RBP9.27□□□□□ -0.93
CDH1-208ENST00000565810 CACNB3P54284 484 aa9.27□□□□□ -0.93
CDH1-208ENST00000565810 TCP10Q12799 353 aa9.27□□□□□ -0.93
CDH1-208ENST00000565810 SULF1Q8IWU6 871 aa9.27□□□□□ -0.93
CDH1-208ENST00000565810 FAM151AQ8WW52 585 aa9.27□□□□□ -0.93
CDH1-208ENST00000565810 TRIM34Q9BYJ4 488 aa9.27□□□□□ -0.93
CDH1-208ENST00000565810 OSBPL5Q9H0X9 879 aaPredicted RBP9.27□□□□□ -0.93
CDH1-208ENST00000565810 GPBP1L1Q9HC44 474 aaPredicted RBP9.27□□□□□ -0.93
CDH1-208ENST00000565810 GGA3Q9NZ52 723 aa9.27□□□□□ -0.93
CDH1-208ENST00000565810 ARPP21Q9UBL0 812 aaPredicted RBP9.27□□□□□ -0.93
CDH1-208ENST00000565810 FAM198AQ9UFP1 575 aa9.27□□□□□ -0.93
CDH1-208ENST00000565810 SAP30BPQ9UHR5 308 aaKnown RBP9.27□□□□□ -0.93
CDH1-208ENST00000565810 PITPNM2Q9BZ72 1349 aa9.27□□□□□ -0.93
CDH1-208ENST00000565810 CHD4Q14839 1912 aa9.27□□□□□ -0.93
CDH1-208ENST00000565810 POTECB2RU33 542 aa9.26□□□□□ -0.93
CDH1-208ENST00000565810 SEC24BO95487 1268 aa9.26□□□□□ -0.93
CDH1-208ENST00000565810 YY1P25490 414 aa9.26□□□□□ -0.93
CDH1-208ENST00000565810 RASA3Q14644 834 aa9.26□□□□□ -0.93
CDH1-208ENST00000565810 SBK1Q52WX2 424 aa9.26□□□□□ -0.93
CDH1-208ENST00000565810 CTR9Q6PD62 1173 aa9.26□□□□□ -0.93
CDH1-208ENST00000565810 LDHDQ86WU2 507 aa9.26□□□□□ -0.93
CDH1-208ENST00000565810 HOOK2Q96ED9 719 aa9.26□□□□□ -0.93
CDH1-208ENST00000565810 DEFB129Q9H1M3 183 aa9.26□□□□□ -0.93
CDH1-208ENST00000565810 RNF41Q9H4P4 317 aaPredicted RBP9.26□□□□□ -0.93
CDH1-208ENST00000565810 ZNF287Q9HBT7 754 aa9.26□□□□□ -0.93
CDH1-208ENST00000565810 EPB41L4AQ9HCS5 686 aaPredicted RBP9.26□□□□□ -0.93
CDH1-208ENST00000565810 DDX4Q9NQI0 724 aaKnown RBP9.26□□□□□ -0.93
CDH1-208ENST00000565810 PI4KBQ9UBF8 816 aa9.26□□□□□ -0.93
CDH1-208ENST00000565810 PPP2R3BQ9Y5P8 575 aa9.26□□□□□ -0.93
CDH1-208ENST00000565810 ZMYM6O95789 1325 aa9.26□□□□□ -0.93
CDH1-208ENST00000565810 SBF1O95248 1867 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 HAND2P61296 217 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 PDE4BQ07343 736 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 PPARAQ07869 468 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 TRDNQ13061 729 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 KRT32Q14532 448 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 NECTIN1Q15223 517 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 SUPT20HL1Q3ZLR7 823 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 C12orf60Q5U649 245 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 CREB3L3Q68CJ9 461 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 CDC37L1Q7L3B6 337 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 KRT26Q7Z3Y9 468 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 FOXP4Q8IVH2 680 aaPredicted RBP9.25□□□□□ -0.93
CDH1-208ENST00000565810 CRACR2BQ8N4Y2 399 aaPredicted RBP9.25□□□□□ -0.93
CDH1-208ENST00000565810 CSRNP1Q96S65 589 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 C22orf23Q9BZE7 217 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 NMRK2Q9NPI5 230 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 MKRN1Q9UHC7 482 aaKnown RBP9.25□□□□□ -0.93
CDH1-208ENST00000565810 PGAP2Q9UHJ9 254 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 TAOK2Q9UL54 1235 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 PALD1Q9ULE6 856 aa9.25□□□□□ -0.93
CDH1-208ENST00000565810 ASTN2O75129 1339 aaPredicted RBP9.25□□□□□ -0.93
CDH1-208ENST00000565810 DICER1Q9UPY3 1922 aaKnown RBP9.25□□□□□ -0.93
CDH1-208ENST00000565810 SLC27A2O14975 620 aa9.24□□□□□ -0.93
CDH1-208ENST00000565810 FOXP2O15409 715 aa9.24□□□□□ -0.93
CDH1-208ENST00000565810 PCP11498 1178 aaKnown RBP9.24□□□□□ -0.93
CDH1-208ENST00000565810 HSPA4P34932 840 aa9.24□□□□□ -0.93
CDH1-208ENST00000565810 SLC4A8Q2Y0W8 1093 aa9.24□□□□□ -0.93
CDH1-208ENST00000565810 MFSD6Q6ZSS7 791 aa9.24□□□□□ -0.93
CDH1-208ENST00000565810 USP48Q86UV5 1035 aa9.24□□□□□ -0.93
CDH1-208ENST00000565810 ZFPM1Q8IX07 1006 aa9.24□□□□□ -0.93
CDH1-208ENST00000565810 TMEM39BQ9GZU3 492 aa9.24□□□□□ -0.93
CDH1-208ENST00000565810 MKNK2Q9HBH9 465 aa9.24□□□□□ -0.93
CDH1-208ENST00000565810 TOMM22Q9NS69 142 aa9.24□□□□□ -0.93
CDH1-208ENST00000565810 SWAP70Q9UH65 585 aa9.24□□□□□ -0.93
CDH1-208ENST00000565810 SERPINB13Q9UIV8 391 aa9.24□□□□□ -0.93
CDH1-208ENST00000565810 ANAPC4Q9UJX5 808 aa9.24□□□□□ -0.93
CDH1-208ENST00000565810 MYH13Q9UKX3 1938 aa9.24□□□□□ -0.93
CDH1-208ENST00000565810 TIAM2Q8IVF5 1701 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 CYP2D7A0A087X1C5 515 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 DDTLA6NHG4 134 aaPredicted RBP9.23□□□□□ -0.93
CDH1-208ENST00000565810 CYP21A2P08686 494 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 CYP2D6P10635 497 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 PSMA5P28066 241 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 NF2P35240 595 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 NT5C2P49902 561 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 PLCD1P51178 756 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 ANAPC15P60006 121 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 AKNAD1Q5T1N1 836 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 DCAF15Q66K64 600 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 RALYLQ86SE5 291 aaKnown RBP9.23□□□□□ -0.93
CDH1-208ENST00000565810 ZNF444Q8N0Y2 327 aaPredicted RBP9.23□□□□□ -0.93
CDH1-208ENST00000565810 STK11IPQ8N1F8 1099 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 KRT23Q9C075 422 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 EHD4Q9H223 541 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 CNNM2Q9H8M5 875 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 HERC5Q9UII4 1024 aaKnown RBP9.23□□□□□ -0.93
CDH1-208ENST00000565810 SCAF8Q9UPN6 1271 aaKnown RBP9.23□□□□□ -0.93
CDH1-208ENST00000565810 DOCK2Q92608 1830 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 CCDC88AQ3V6T2 1871 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 CNTNAP1P78357 1384 aa9.23□□□□□ -0.93
CDH1-208ENST00000565810 MAST2Q6P0Q8 1798 aa9.22□□□□□ -0.93
CDH1-208ENST00000565810 TBC1D12O60347 775 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms