RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 SOBPA7XYQ1 873 aa10.78□□□□□ -0.68
CDH13-207ENST00000565636 CELF2O95319 508 aaKnown RBP10.78□□□□□ -0.68
CDH13-207ENST00000565636 CALD1Q05682 793 aaKnown RBP10.78□□□□□ -0.68
CDH13-207ENST00000565636 PPP2R2DQ66LE6 453 aa10.78□□□□□ -0.68
CDH13-207ENST00000565636 XAGE3Q8WTP9 111 aa10.78□□□□□ -0.68
CDH13-207ENST00000565636 RUNDC1Q96C34 613 aa10.78□□□□□ -0.68
CDH13-207ENST00000565636 GPSM3Q9Y4H4 160 aa10.78□□□□□ -0.68
CDH13-207ENST00000565636 HIRAP54198 1017 aaPredicted RBP10.77□□□□□ -0.69
CDH13-207ENST00000565636 RPS8P62241 208 aaKnown RBP10.77□□□□□ -0.69
CDH13-207ENST00000565636 FKBP1BP68106 108 aa10.77□□□□□ -0.69
CDH13-207ENST00000565636 CYP4F22Q6NT55 531 aa10.77□□□□□ -0.69
CDH13-207ENST00000565636 LRRN4Q8WUT4 740 aa10.77□□□□□ -0.69
CDH13-207ENST00000565636 THUMPD2Q9BTF0 503 aaKnown RBP10.77□□□□□ -0.69
CDH13-207ENST00000565636 MYH3P11055 1940 aa10.76□□□□□ -0.69
CDH13-207ENST00000565636 AP1G2O75843 785 aa10.76□□□□□ -0.69
CDH13-207ENST00000565636 VIL1P09327 827 aaKnown RBP10.76□□□□□ -0.69
CDH13-207ENST00000565636 VSIG8P0DPA2 414 aa10.76□□□□□ -0.69
CDH13-207ENST00000565636 HCLS1P14317 486 aaPredicted RBP10.76□□□□□ -0.69
CDH13-207ENST00000565636 MLLT1Q03111 559 aaPredicted RBP10.76□□□□□ -0.69
CDH13-207ENST00000565636 PROSER3Q2NL68 480 aa10.76□□□□□ -0.69
CDH13-207ENST00000565636 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.76□□□□□ -0.69
CDH13-207ENST00000565636 PPP1R26Q5T8A7 1209 aaPredicted RBP10.76□□□□□ -0.69
CDH13-207ENST00000565636 C2orf69Q8N8R5 385 aa10.76□□□□□ -0.69
CDH13-207ENST00000565636 AGBL3Q8NEM8 1001 aa10.76□□□□□ -0.69
CDH13-207ENST00000565636 DCPSQ96C86 337 aaKnown RBP10.76□□□□□ -0.69
CDH13-207ENST00000565636 KCTD15Q96SI1 283 aaPredicted RBP10.76□□□□□ -0.69
CDH13-207ENST00000565636 ZC3H12CQ9C0D7 883 aaKnown RBP10.76□□□□□ -0.69
CDH13-207ENST00000565636 PDE4DIPQ5VU43 2346 aa10.75□□□□□ -0.69
CDH13-207ENST00000565636 YDJCA8MPS7 323 aa10.75□□□□□ -0.69
CDH13-207ENST00000565636 TRAF5O00463 557 aa10.75□□□□□ -0.69
CDH13-207ENST00000565636 RAD17O75943 681 aa10.75□□□□□ -0.69
CDH13-207ENST00000565636 AIMP1Q12904 312 aaKnown RBP10.75□□□□□ -0.69
CDH13-207ENST00000565636 NR6A1Q15406 480 aa10.75□□□□□ -0.69
CDH13-207ENST00000565636 HDGFL1Q5TGJ6 251 aa10.75□□□□□ -0.69
CDH13-207ENST00000565636 ZBTB38Q8NAP3 1195 aaPredicted RBP10.75□□□□□ -0.69
CDH13-207ENST00000565636 CCDC191Q8NCU4 936 aa10.75□□□□□ -0.69
CDH13-207ENST00000565636 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.75□□□□□ -0.69
CDH13-207ENST00000565636 FAM117AQ9C073 453 aa10.75□□□□□ -0.69
CDH13-207ENST00000565636 NSFL1CQ9UNZ2 370 aaKnown RBP10.75□□□□□ -0.69
CDH13-207ENST00000565636 MYBBP1AQ9BQG0 1328 aaKnown RBP10.75□□□□□ -0.69
CDH13-207ENST00000565636 DUOX1Q9NRD9 1551 aa10.74□□□□□ -0.69
CDH13-207ENST00000565636 TTLL8A6PVC2 850 aa10.74□□□□□ -0.69
CDH13-207ENST00000565636 TCERG1O14776 1098 aaKnown RBP10.74□□□□□ -0.69
CDH13-207ENST00000565636 ZNF853P0CG23 659 aa10.74□□□□□ -0.69
CDH13-207ENST00000565636 NBPF20Q3BBV1 942 aa10.74□□□□□ -0.69
CDH13-207ENST00000565636 RGMBQ6NW40 437 aa10.74□□□□□ -0.69
CDH13-207ENST00000565636 PODNQ7Z5L7 613 aa10.74□□□□□ -0.69
CDH13-207ENST00000565636 PROCA1Q8NCQ7 364 aaPredicted RBP10.74□□□□□ -0.69
CDH13-207ENST00000565636 GLIS2Q9BZE0 524 aaPredicted RBP10.74□□□□□ -0.69
CDH13-207ENST00000565636 PITPNM2Q9BZ72 1349 aa10.74□□□□□ -0.69
CDH13-207ENST00000565636 PSMD14O00487 310 aa10.73□□□□□ -0.69
CDH13-207ENST00000565636 IRS4O14654 1257 aaPredicted RBP10.73□□□□□ -0.69
CDH13-207ENST00000565636 HUNKP57058 714 aa10.73□□□□□ -0.69
CDH13-207ENST00000565636 GNAI1P63096 354 aa10.73□□□□□ -0.69
CDH13-207ENST00000565636 NOM1Q5C9Z4 860 aaKnown RBP10.73□□□□□ -0.69
CDH13-207ENST00000565636 KRT26Q7Z3Y9 468 aa10.73□□□□□ -0.69
CDH13-207ENST00000565636 TBC1D16Q8TBP0 767 aa10.73□□□□□ -0.69
CDH13-207ENST00000565636 GBA2Q9HCG7 927 aaPredicted RBP10.73□□□□□ -0.69
CDH13-207ENST00000565636 CHPF2Q9P2E5 772 aa10.73□□□□□ -0.69
CDH13-207ENST00000565636 POLLQ9UGP5 575 aa10.73□□□□□ -0.69
CDH13-207ENST00000565636 SCN9AQ15858 1988 aa10.73□□□□□ -0.69
CDH13-207ENST00000565636 PDE8AO60658 829 aa10.72□□□□□ -0.69
CDH13-207ENST00000565636 AOC2O75106 756 aa10.72□□□□□ -0.69
CDH13-207ENST00000565636 PPFIA3O75145 1194 aa10.72□□□□□ -0.69
CDH13-207ENST00000565636 DDX58O95786 925 aaKnown RBP10.72□□□□□ -0.69
CDH13-207ENST00000565636 PCCAP05165 728 aaPredicted RBP10.72□□□□□ -0.69
CDH13-207ENST00000565636 ZNF280AP59817 542 aaPredicted RBP10.72□□□□□ -0.69
CDH13-207ENST00000565636 FMR1Q06787 632 aaKnown RBP eCLIP10.72□□□□□ -0.69
CDH13-207ENST00000565636 WDR43Q15061 677 aaKnown RBP eCLIP10.72□□□□□ -0.69
CDH13-207ENST00000565636 PKN2Q16513 984 aaKnown RBP10.72□□□□□ -0.69
CDH13-207ENST00000565636 CCDC152Q4G0S7 254 aa10.72□□□□□ -0.69
CDH13-207ENST00000565636 DUSP27Q5VZP5 1158 aa10.72□□□□□ -0.69
CDH13-207ENST00000565636 USP48Q86UV5 1035 aa10.72□□□□□ -0.69
CDH13-207ENST00000565636 CELF1Q92879 486 aaKnown RBP10.72□□□□□ -0.69
CDH13-207ENST00000565636 FAM89AQ96GI7 184 aa10.72□□□□□ -0.69
CDH13-207ENST00000565636 IFT57Q9NWB7 429 aa10.72□□□□□ -0.69
CDH13-207ENST00000565636 FAM155AB1AL88 458 aaPredicted RBP10.71□□□□□ -0.69
CDH13-207ENST00000565636 ECE2O60344 883 aa10.71□□□□□ -0.69
CDH13-207ENST00000565636 ANXA1P04083 346 aa10.71□□□□□ -0.69
CDH13-207ENST00000565636 ATP2B4P23634 1241 aa10.71□□□□□ -0.69
CDH13-207ENST00000565636 Q6ZVU0 165 aa10.71□□□□□ -0.69
CDH13-207ENST00000565636 TRPM4Q8TD43 1214 aa10.71□□□□□ -0.69
CDH13-207ENST00000565636 DNMT3LQ9UJW3 386 aa10.71□□□□□ -0.69
CDH13-207ENST00000565636 MYO3BQ8WXR4 1341 aa10.7□□□□□ -0.7
CDH13-207ENST00000565636 UNCXA6NJT0 531 aa10.7□□□□□ -0.7
CDH13-207ENST00000565636 CCDC85CA6NKD9 419 aa10.7□□□□□ -0.7
CDH13-207ENST00000565636 GPSM2P81274 684 aa10.7□□□□□ -0.7
CDH13-207ENST00000565636 MCOLN1Q9GZU1 580 aa10.7□□□□□ -0.7
CDH13-207ENST00000565636 GGA1Q9UJY5 639 aa10.7□□□□□ -0.7
CDH13-207ENST00000565636 RTL9Q8NET4 1388 aa10.69□□□□□ -0.7
CDH13-207ENST00000565636 XDHP47989 1333 aa10.69□□□□□ -0.7
CDH13-207ENST00000565636 ZNF157P51786 506 aaPredicted RBP10.69□□□□□ -0.7
CDH13-207ENST00000565636 KIF4BQ2VIQ3 1234 aa10.69□□□□□ -0.7
CDH13-207ENST00000565636 CCDC30Q5VVM6 783 aa10.69□□□□□ -0.7
CDH13-207ENST00000565636 ADAM32Q8TC27 787 aa10.69□□□□□ -0.7
CDH13-207ENST00000565636 GMLQ99445 158 aa10.69□□□□□ -0.7
CDH13-207ENST00000565636 CDC5LQ99459 802 aaKnown RBP10.69□□□□□ -0.7
CDH13-207ENST00000565636 METTL22Q9BUU2 404 aaPredicted RBP10.69□□□□□ -0.7
CDH13-207ENST00000565636 DBNDD1Q9H9R9 158 aa10.69□□□□□ -0.7
CDH13-207ENST00000565636 BSDC1Q9NW68 430 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms