RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	CCDC178	Q5BJE1	867 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	YTHDF3	Q7Z739	585 aa	Known RBP	4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	ZC3H15	Q8WU90	426 aa	Known RBP	4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	NRBP1	Q9UHY1	535 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	KIAA0232	Q92628	1395 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	CCT6A	P40227	531 aa	Known RBP	4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	ARHGAP10	A1A4S6	786 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	PDCD7	Q8N8D1	485 aa	Known RBP	4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	PRPF40B	Q6NWY9	871 aa	Known RBP	4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	STMN2	Q93045	179 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	EPN3	Q9H201	632 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	EXOC1	Q9NV70	894 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	STOML1	Q9UBI4	398 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	ABCC10	Q5T3U5	1492 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	SRRM3	A6NNA2	597 aa	Predicted RBP	4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	ICA1	Q05084	483 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	PLA2G4A	P47712	749 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	LRMP	Q12912	555 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	CCDC122	Q5T0U0	273 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	KPNB1	Q14974	876 aa	Known RBP	4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	NOX5	Q96PH1	765 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	RFX7	Q2KHR2	1363 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	ZNF518A	Q6AHZ1	1483 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	BICD1	Q96G01	975 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	CCT8L2	Q96SF2	557 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	MRGBP	Q9NV56	204 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	NUTM2F	A1L443	756 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	NUTM2G	Q5VZR2	741 aa		4.76	□□□□□ -1.65
MACF1-231	ENST00000564288	ESRRB	O95718	433 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	DES	P17661	470 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	DZIP1	Q86YF9	867 aa	Known RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	RTEL1	Q9NZ71	1219 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	AKR1B10	O60218	316 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	GRAMD1A	Q96CP6	724 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	VWA3B	Q502W6	1294 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	ITIH3	Q06033	890 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	NMI	Q13287	307 aa	Predicted RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	ENOX1	Q8TC92	643 aa	Known RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	SMC6	Q96SB8	1091 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	FAM192A	Q9GZU8	254 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	ARHGEF40	Q8TER5	1519 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	WDR78	Q5VTH9	848 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	TAOK2	Q9UL54	1235 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	MIER3	Q7Z3K6	550 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	ITFG2	Q969R8	447 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	TBC1D2B	Q9UPU7	963 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	RRS1	Q15050	365 aa	Known RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	FAM204A	Q9H8W3	233 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	ZNF274	Q96GC6	653 aa	Predicted RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	FUT8	Q9BYC5	575 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	ATP2A2	P16615	1042 aa	Known RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	MAP3K21	Q5TCX8	1036 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	VSIG1	Q86XK7	387 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	MAPK13	O15264	365 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	PSEN1	P49768	467 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	DEUP1	Q05D60	604 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	LGSN	Q5TDP6	509 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	THOC1	Q96FV9	657 aa	Known RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	RAB15	P59190	212 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	CUL5	Q93034	780 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	PPP1R12C	Q9BZL4	782 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.75	□□□□□ -1.65	5e-7	■■■□□ 17.9
MACF1-231	ENST00000564288	MTUS1	Q9ULD2	1270 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	GPATCH8	Q9UKJ3	1502 aa	Known RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	STAMBP	O95630	424 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	MAP7D1	Q3KQU3	841 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	GNPTAB	Q3T906	1256 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	TSPYL2	Q9H2G4	693 aa	Predicted RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	GUCA1B	Q9UMX6	200 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	UTP11	Q9Y3A2	253 aa	Known RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	PRLR	P16471	622 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	PAPOLA	P51003	745 aa	Known RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	SND1	Q7KZF4	910 aa	Known RBP eCLIP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	CROCCP3	Q8IVE0	287 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	CORO1C	Q9ULV4	474 aa	Predicted RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	MAST1	Q9Y2H9	1570 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	TBC1D8B	Q0IIM8	1120 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	FERMT3	Q86UX7	667 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	HNRNPCL1	O60812	293 aa	Known RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	RPS6KA1	Q15418	735 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	TAF7	Q15545	349 aa	Predicted RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	MTRF1L	Q9UGC7	380 aa	Known RBP	4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	RASAL2	Q9UJF2	1139 aa		4.75	□□□□□ -1.65
MACF1-231	ENST00000564288	PLB1	Q6P1J6	1458 aa		4.74	□□□□□ -1.65
MACF1-231	ENST00000564288	ADGRL3	Q9HAR2	1447 aa		4.74	□□□□□ -1.65
MACF1-231	ENST00000564288	DDX27	Q96GQ7	796 aa	Known RBP	4.74	□□□□□ -1.65
MACF1-231	ENST00000564288	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	4.74	□□□□□ -1.65
MACF1-231	ENST00000564288	ZBTB22	O15209	634 aa		4.74	□□□□□ -1.65
MACF1-231	ENST00000564288	C10orf76	Q5T2E6	689 aa		4.74	□□□□□ -1.65
MACF1-231	ENST00000564288	TPX2	Q9ULW0	747 aa	Known RBP	4.74	□□□□□ -1.65
MACF1-231	ENST00000564288	SIRT1	Q96EB6	747 aa		4.74	□□□□□ -1.65
MACF1-231	ENST00000564288	UBA5	Q9GZZ9	404 aa		4.74	□□□□□ -1.65
MACF1-231	ENST00000564288	FSD1	Q9BTV5	496 aa		4.74	□□□□□ -1.65
MACF1-231	ENST00000564288	RAB34	Q9BZG1	259 aa		4.74	□□□□□ -1.65
MACF1-231	ENST00000564288	GLT8D2	Q9H1C3	349 aa		4.74	□□□□□ -1.65
MACF1-231	ENST00000564288	CUTA	O60888	179 aa		4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms