RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 RNF41Q9H4P4 317 aaPredicted RBP25.96■■□□□ 1.75
LINC01960-201ENST00000563759 CNNM2Q9H8M5 875 aa25.96■■□□□ 1.75
LINC01960-201ENST00000563759 FOXD4L1Q9NU39 408 aa25.96■■□□□ 1.75
LINC01960-201ENST00000563759 RHBDL3P58872 404 aa25.96■■□□□ 1.75
LINC01960-201ENST00000563759 RSBN1LQ6PCB5 846 aaPredicted RBP25.96■■□□□ 1.75
LINC01960-201ENST00000563759 Q6ZUG5 572 aa25.96■■□□□ 1.75
LINC01960-201ENST00000563759 AMOTL1Q8IY63 956 aa25.96■■□□□ 1.75
LINC01960-201ENST00000563759 LRRC2Q9BYS8 371 aa25.96■■□□□ 1.75
LINC01960-201ENST00000563759 ANAPC4Q9UJX5 808 aa25.96■■□□□ 1.75
LINC01960-201ENST00000563759 CYP2D7A0A087X1C5 515 aa25.95■■□□□ 1.74
LINC01960-201ENST00000563759 RBM5P52756 815 aaKnown RBP eCLIP25.95■■□□□ 1.74
LINC01960-201ENST00000563759 HDLBPQ00341 1268 aaKnown RBP25.95■■□□□ 1.74
LINC01960-201ENST00000563759 TOB2Q14106 344 aaPredicted RBP25.95■■□□□ 1.74
LINC01960-201ENST00000563759 CHST3Q7LGC8 479 aa25.95■■□□□ 1.74
LINC01960-201ENST00000563759 MAPKAPK5Q8IW41 473 aa25.95■■□□□ 1.74
LINC01960-201ENST00000563759 STK11IPQ8N1F8 1099 aa25.95■■□□□ 1.74
LINC01960-201ENST00000563759 TOMM22Q9NS69 142 aa25.95■■□□□ 1.74
LINC01960-201ENST00000563759 VIL1P09327 827 aaKnown RBP25.94■■□□□ 1.74
LINC01960-201ENST00000563759 EXOSC10Q01780 885 aaKnown RBP25.94■■□□□ 1.74
LINC01960-201ENST00000563759 ZDHHC15Q96MV8 337 aa25.94■■□□□ 1.74
LINC01960-201ENST00000563759 MKRN1Q9UHC7 482 aaKnown RBP25.94■■□□□ 1.74
LINC01960-201ENST00000563759 SERPINA10Q9UK55 444 aa25.94■■□□□ 1.74
LINC01960-201ENST00000563759 SBF1O95248 1867 aa25.94■■□□□ 1.74
LINC01960-201ENST00000563759 B4E1Z4 1266 aa25.94■■□□□ 1.74
LINC01960-201ENST00000563759 SYT17Q9BSW7 474 aa25.94■■□□□ 1.74
LINC01960-201ENST00000563759 MRIQ9BWK5 157 aa25.94■■□□□ 1.74
LINC01960-201ENST00000563759 KRT23Q9C075 422 aa25.94■■□□□ 1.74
LINC01960-201ENST00000563759 MYH8P13535 1937 aa25.93■■□□□ 1.74
LINC01960-201ENST00000563759 FLT1P17948 1338 aa25.93■■□□□ 1.74
LINC01960-201ENST00000563759 PRC1O43663 620 aa25.93■■□□□ 1.74
LINC01960-201ENST00000563759 SBK1Q52WX2 424 aa25.93■■□□□ 1.74
LINC01960-201ENST00000563759 ZSCAN31Q96LW9 406 aaPredicted RBP25.93■■□□□ 1.74
LINC01960-201ENST00000563759 SLC3A2P08195 630 aaKnown RBP25.92■■□□□ 1.74
LINC01960-201ENST00000563759 USP17L8P0C7I0 530 aa25.92■■□□□ 1.74
LINC01960-201ENST00000563759 RRP12Q5JTH9 1297 aaKnown RBP25.92■■□□□ 1.74
LINC01960-201ENST00000563759 BRF1Q92994 677 aa25.92■■□□□ 1.74
LINC01960-201ENST00000563759 SH2B1Q9NRF2 756 aaPredicted RBP25.92■■□□□ 1.74
LINC01960-201ENST00000563759 SRCAPQ6ZRS2 3230 aa25.92■■□□□ 1.74
LINC01960-201ENST00000563759 WDR19Q8NEZ3 1342 aa25.92■■□□□ 1.74
LINC01960-201ENST00000563759 SLC4A8Q2Y0W8 1093 aa25.91■■□□□ 1.74
LINC01960-201ENST00000563759 INCENPQ9NQS7 918 aa25.91■■□□□ 1.74
LINC01960-201ENST00000563759 USP40Q9NVE5 1235 aa25.91■■□□□ 1.74
LINC01960-201ENST00000563759 UTRNP46939 3433 aa25.91■■□□□ 1.74
LINC01960-201ENST00000563759 CYP2D6P10635 497 aa25.91■■□□□ 1.74
LINC01960-201ENST00000563759 CXCL9Q07325 125 aa25.91■■□□□ 1.74
LINC01960-201ENST00000563759 CIAPIN1Q6FI81 312 aa25.91■■□□□ 1.74
LINC01960-201ENST00000563759 APOBEC3HQ6NTF7 200 aaKnown RBP25.91■■□□□ 1.74
LINC01960-201ENST00000563759 TPCN1Q9ULQ1 816 aa25.91■■□□□ 1.74
LINC01960-201ENST00000563759 SMIM22K7EJ46 135 aa25.9■■□□□ 1.74
LINC01960-201ENST00000563759 KDM4AO75164 1064 aa25.9■■□□□ 1.74
LINC01960-201ENST00000563759 LARGE1O95461 756 aa25.9■■□□□ 1.74
LINC01960-201ENST00000563759 PICALMQ13492 652 aa25.9■■□□□ 1.74
LINC01960-201ENST00000563759 SAP30BPQ9UHR5 308 aaKnown RBP25.9■■□□□ 1.74
LINC01960-201ENST00000563759 HDAC9Q9UKV0 1011 aa25.9■■□□□ 1.74
LINC01960-201ENST00000563759 TACC3Q9Y6A5 838 aa25.9■■□□□ 1.74
LINC01960-201ENST00000563759 PCP11498 1178 aaKnown RBP25.89■■□□□ 1.74
LINC01960-201ENST00000563759 ANTXR2P58335 489 aa25.89■■□□□ 1.74
LINC01960-201ENST00000563759 CUL4AQ13619 759 aa25.89■■□□□ 1.74
LINC01960-201ENST00000563759 CDC42EP5Q6NZY7 148 aa25.89■■□□□ 1.74
LINC01960-201ENST00000563759 ARHGAP27Q6ZUM4 889 aa25.89■■□□□ 1.74
LINC01960-201ENST00000563759 OGFOD1Q8N543 542 aa25.89■■□□□ 1.74
LINC01960-201ENST00000563759 ZBTB12Q9Y330 459 aaPredicted RBP25.89■■□□□ 1.74
LINC01960-201ENST00000563759 POLR3DP05423 398 aaPredicted RBP25.89■■□□□ 1.73
LINC01960-201ENST00000563759 ME3Q16798 604 aa25.89■■□□□ 1.73
LINC01960-201ENST00000563759 AGBL3Q8NEM8 1001 aa25.89■■□□□ 1.73
LINC01960-201ENST00000563759 AGXT2Q9BYV1 514 aa25.89■■□□□ 1.73
LINC01960-201ENST00000563759 TNIP1Q15025 636 aa25.88■■□□□ 1.73
LINC01960-201ENST00000563759 CFAP100Q494V2 611 aa25.88■■□□□ 1.73
LINC01960-201ENST00000563759 C12orf60Q5U649 245 aa25.88■■□□□ 1.73
LINC01960-201ENST00000563759 CYB5R4Q7L1T6 521 aa25.88■■□□□ 1.73
LINC01960-201ENST00000563759 GMLQ99445 158 aa25.88■■□□□ 1.73
LINC01960-201ENST00000563759 PCDHAC2Q9Y5I4 1007 aa25.88■■□□□ 1.73
LINC01960-201ENST00000563759 ROBO3Q96MS0 1386 aa25.88■■□□□ 1.73
LINC01960-201ENST00000563759 WDHD1O75717 1129 aaPredicted RBP25.87■■□□□ 1.73
LINC01960-201ENST00000563759 EVX2Q03828 476 aa25.87■■□□□ 1.73
LINC01960-201ENST00000563759 ESR2Q92731 530 aa25.87■■□□□ 1.73
LINC01960-201ENST00000563759 PRELPP51888 382 aa25.87■■□□□ 1.73
LINC01960-201ENST00000563759 PDE4BQ07343 736 aa25.87■■□□□ 1.73
LINC01960-201ENST00000563759 FBXL16Q8N461 479 aa25.87■■□□□ 1.73
LINC01960-201ENST00000563759 NKX2-3Q8TAU0 364 aa25.87■■□□□ 1.73
LINC01960-201ENST00000563759 INTS4Q96HW7 963 aaKnown RBP25.87■■□□□ 1.73
LINC01960-201ENST00000563759 APOBRQ0VD83 1088 aa25.86■■□□□ 1.73
LINC01960-201ENST00000563759 ZSWIM5Q9P217 1185 aa25.86■■□□□ 1.73
LINC01960-201ENST00000563759 PRDM1O75626 825 aa25.85■■□□□ 1.73
LINC01960-201ENST00000563759 EIF6P56537 245 aaKnown RBP25.85■■□□□ 1.73
LINC01960-201ENST00000563759 CCDC83Q8IWF9 413 aa25.85■■□□□ 1.73
LINC01960-201ENST00000563759 TMEM87BQ96K49 555 aa25.85■■□□□ 1.73
LINC01960-201ENST00000563759 STK3Q13188 491 aa25.85■■□□□ 1.73
LINC01960-201ENST00000563759 SART3Q15020 963 aaKnown RBP25.85■■□□□ 1.73
LINC01960-201ENST00000563759 DDX4Q9NQI0 724 aaKnown RBP25.85■■□□□ 1.73
LINC01960-201ENST00000563759 NAP1L2Q9ULW6 460 aaPredicted RBP25.85■■□□□ 1.73
LINC01960-201ENST00000563759 ANGEL1Q9UNK9 670 aaKnown RBP25.85■■□□□ 1.73
LINC01960-201ENST00000563759 RANBP6O60518 1105 aaKnown RBP25.84■■□□□ 1.73
LINC01960-201ENST00000563759 FGRP09769 529 aa25.84■■□□□ 1.73
LINC01960-201ENST00000563759 GPHNQ9NQX3 736 aaPredicted RBP25.84■■□□□ 1.73
LINC01960-201ENST00000563759 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.84■■□□□ 1.73
LINC01960-201ENST00000563759 ORC4O43929 436 aa25.83■■□□□ 1.73
LINC01960-201ENST00000563759 PLCD1P51178 756 aa25.83■■□□□ 1.73
LINC01960-201ENST00000563759 NECAB1Q8N987 351 aa25.83■■□□□ 1.73
LINC01960-201ENST00000563759 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms