RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 KRI1Q8N9T8 703 aaKnown RBP11.92□□□□□ -0.5
RNF40-204ENST00000563683 FBXO18Q8NFZ0 1043 aa11.92□□□□□ -0.5
RNF40-204ENST00000563683 CAGE1Q8TC20 777 aa11.92□□□□□ -0.5
RNF40-204ENST00000563683 NOC3LQ8WTT2 800 aaKnown RBP11.92□□□□□ -0.5
RNF40-204ENST00000563683 KAT14Q9H8E8 782 aa11.92□□□□□ -0.5
RNF40-204ENST00000563683 NDUFA8P51970 172 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 RAD51AP2Q09MP3 1159 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 DHX40Q8IX18 779 aaKnown RBP11.91□□□□□ -0.5
RNF40-204ENST00000563683 PIGBQ92521 554 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 CARD10Q9BWT7 1032 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 CRNKL1Q9BZJ0 848 aaKnown RBP11.91□□□□□ -0.5
RNF40-204ENST00000563683 KCNH3Q9ULD8 1083 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 EIF5P55010 431 aaKnown RBP11.91□□□□□ -0.5
RNF40-204ENST00000563683 FEZ2Q9UHY8 353 aaPredicted RBP11.91□□□□□ -0.5
RNF40-204ENST00000563683 PHLPP2Q6ZVD8 1323 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 POLR3GO15318 223 aaPredicted RBP11.91□□□□□ -0.5
RNF40-204ENST00000563683 POLR2DO15514 142 aaKnown RBP11.91□□□□□ -0.5
RNF40-204ENST00000563683 GNAT2P19087 354 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 PLA2G4AP47712 749 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 HLFQ16534 295 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 AIFM3Q96NN9 605 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 GPR108Q9NPR9 543 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 ZNHIT6Q9NWK9 470 aaKnown RBP11.91□□□□□ -0.5
RNF40-204ENST00000563683 V9GY48 417 aaPredicted RBP11.91□□□□□ -0.5
RNF40-204ENST00000563683 MAP3K15Q6ZN16 1313 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 E4F1Q66K89 784 aaPredicted RBP11.91□□□□□ -0.5
RNF40-204ENST00000563683 TRERF1Q96PN7 1200 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 RASSF4Q9H2L5 321 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 MCM9Q9NXL9 1143 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 KIAA1468Q9P260 1216 aa11.91□□□□□ -0.5
RNF40-204ENST00000563683 RIMBP3CA6NJZ7 1639 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 RIMBP3BA6NNM3 1639 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 RIMBP3Q9UFD9 1639 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 ITSN1Q15811 1721 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 C6orf229H3BNL8 230 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 UBA7P41226 1012 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 ETF1P62495 437 aaKnown RBP11.9□□□□□ -0.5
RNF40-204ENST00000563683 CCDC70Q6NSX1 233 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 ZSCAN29Q8IWY8 852 aaPredicted RBP11.9□□□□□ -0.5
RNF40-204ENST00000563683 SDR42E1Q8WUS8 393 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 TANGO6Q9C0B7 1094 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 RCOR1Q9UKL0 485 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 DIP2AQ14689 1571 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 XRN1Q8IZH2 1706 aaKnown RBP11.9□□□□□ -0.5
RNF40-204ENST00000563683 RBM5P52756 815 aaKnown RBP eCLIP11.9□□□□□ -0.5
RNF40-204ENST00000563683 ZNF174Q15697 407 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 KIF4BQ2VIQ3 1234 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 IFNL3Q8IZI9 196 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 ZBTB9Q96C00 473 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 CLIC6Q96NY7 704 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 NUP88Q99567 741 aaPredicted RBP11.9□□□□□ -0.5
RNF40-204ENST00000563683 EFCC1Q9HA90 598 aa11.9□□□□□ -0.5
RNF40-204ENST00000563683 EFCAB8A8MWE9 144 aa11.9□□□□□ -0.51
RNF40-204ENST00000563683 ZRANB2O95218 330 aaKnown RBP eCLIP11.9□□□□□ -0.51
RNF40-204ENST00000563683 MYL5Q02045 173 aa11.9□□□□□ -0.51
RNF40-204ENST00000563683 SEC31BQ9NQW1 1179 aa11.9□□□□□ -0.51
RNF40-204ENST00000563683 TFCP2L1Q9NZI6 479 aa11.9□□□□□ -0.51
RNF40-204ENST00000563683 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.9□□□□□ -0.51
RNF40-204ENST00000563683 CHD2O14647 1828 aaKnown RBP11.9□□□□□ -0.51
RNF40-204ENST00000563683 DIP2BQ9P265 1576 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 N4BP3O15049 544 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 CIAO1O76071 339 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 KRT18P05783 430 aaKnown RBP11.89□□□□□ -0.51
RNF40-204ENST00000563683 PFKFB1P16118 471 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 CASQ1P31415 396 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 KIF5BP33176 963 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 HSP90B2PQ58FF3 399 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 AKNAD1Q5T1N1 836 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 KANK3Q6NY19 840 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 BRINP3Q76B58 766 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 XPO4Q9C0E2 1151 aaKnown RBP11.89□□□□□ -0.51
RNF40-204ENST00000563683 WWC3Q9ULE0 1092 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 SPATA31A3Q5VYP0 1347 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 NCAPD2Q15021 1401 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 MON2Q7Z3U7 1717 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 BTBD18B2RXH4 712 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 PATL2C9JE40 543 aaKnown RBP11.89□□□□□ -0.51
RNF40-204ENST00000563683 YEATS4O95619 227 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 EPS15P42566 896 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 GYG1P46976 350 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 TSGA10IPQ3SY00 556 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 KRBA2Q6ZNG9 492 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 NLRP10Q86W26 655 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 PLCD3Q8N3E9 789 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 STAMQ92783 540 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 CCDC87Q9NVE4 849 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 CARMIL3Q8ND23 1372 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 MPHOSPH10O00566 681 aaKnown RBP11.89□□□□□ -0.51
RNF40-204ENST00000563683 RFC4P35249 363 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 FANCCQ00597 558 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 PNOCQ13519 176 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 STOX1Q6ZVD7 989 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 C8orf37Q96NL8 207 aa11.89□□□□□ -0.51
RNF40-204ENST00000563683 SEC63Q9UGP8 760 aaKnown RBP11.89□□□□□ -0.51
RNF40-204ENST00000563683 VWA3AA6NCI4 1184 aa11.88□□□□□ -0.51
RNF40-204ENST00000563683 MCM7P33993 719 aa11.88□□□□□ -0.51
RNF40-204ENST00000563683 KCNQ4P56696 695 aa11.88□□□□□ -0.51
RNF40-204ENST00000563683 RRAGBQ5VZM2 374 aa11.88□□□□□ -0.51
RNF40-204ENST00000563683 CTR9Q6PD62 1173 aa11.88□□□□□ -0.51
RNF40-204ENST00000563683 PLIN2Q99541 437 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms