RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 SLC9A9Q8IVB4 645 aa6.51□□□□□ -1.37
VPS35P1-201ENST00000563400 GMCL1Q96IK5 515 aa6.51□□□□□ -1.37
VPS35P1-201ENST00000563400 ZSCAN10Q96SZ4 725 aaPredicted RBP6.51□□□□□ -1.37
VPS35P1-201ENST00000563400 NT5C1AQ9BXI3 368 aa6.51□□□□□ -1.37
VPS35P1-201ENST00000563400 PCGF6Q9BYE7 350 aa6.51□□□□□ -1.37
VPS35P1-201ENST00000563400 CAAP1Q9H8G2 361 aa6.51□□□□□ -1.37
VPS35P1-201ENST00000563400 AS3MTQ9HBK9 375 aa6.51□□□□□ -1.37
VPS35P1-201ENST00000563400 RAB6BQ9NRW1 208 aa6.51□□□□□ -1.37
VPS35P1-201ENST00000563400 MCM8Q9UJA3 840 aa6.51□□□□□ -1.37
VPS35P1-201ENST00000563400 FOXD3Q9UJU5 478 aaPredicted RBP6.51□□□□□ -1.37
VPS35P1-201ENST00000563400 DAAM1Q9Y4D1 1078 aa6.51□□□□□ -1.37
VPS35P1-201ENST00000563400 CFAP74Q9C0B2 1584 aa6.51□□□□□ -1.37
VPS35P1-201ENST00000563400 ERBB4Q15303 1308 aa6.51□□□□□ -1.37
VPS35P1-201ENST00000563400 CDC14CA4D256 554 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 H7C1W4 665 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 NEK2P51955 445 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 MAP3K10Q02779 954 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 FAM160A1Q05DH4 1040 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 ERAP2Q6P179 960 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 FOXR1Q6PIV2 292 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 NIM1KQ8IY84 436 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 SPICE1Q8N0Z3 855 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 NANOS1Q8WY41 292 aaKnown RBP6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 MFSD3Q96ES6 412 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 TMEM74Q96NL1 305 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 SMAD5Q99717 465 aaKnown RBP6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 NOC4LQ9BVI4 516 aaKnown RBP6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 GRIP2Q9C0E4 1043 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 DYRK1BQ9Y463 629 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 EHBP1L1Q8N3D4 1523 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 ARAP3Q8WWN8 1544 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 MIA2Q96PC5 1412 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 CFAP43Q8NDM7 1665 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 SPATA31C2B4DYI2 1134 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 PDE8AO60658 829 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 HSP90AA1P07900 732 aaKnown RBP6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 COL6A1P12109 1028 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 RHOQP17081 205 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 FOXK2Q01167 660 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 CENPCQ03188 943 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 POU4F2Q12837 409 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 COL9A2Q14055 689 aaPredicted RBP6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 SIM2Q14190 667 aaPredicted RBP6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 HLTFQ14527 1009 aaKnown RBP eCLIP6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 CBX2Q14781 532 aaPredicted RBP6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 TNNI3KQ59H18 835 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 IL31Q6EBC2 164 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 TMEM214Q6NUQ4 689 aaKnown RBP6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 RNF180Q86T96 592 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 ATL2Q8NHH9 583 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 XAGE2Q96GT9 111 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 RTFDC1Q9BY42 306 aaPredicted RBP6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 BCO2Q9BYV7 579 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 TNKS2Q9H2K2 1166 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 KLK14Q9P0G3 267 aa6.5□□□□□ -1.37
VPS35P1-201ENST00000563400 POGZQ7Z3K3 1410 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 FANCAO15360 1455 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 IL2RAP01589 272 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 INHAP05111 366 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 CRKP46108 304 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 TRAPPC10P48553 1259 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 APOBRQ0VD83 1088 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 DGKZQ13574 1117 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 MLC1Q15049 377 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 MAP3K11Q16584 847 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 FAM83BQ5T0W9 1011 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 SH3PXD2AQ5TCZ1 1133 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 LARP1BQ659C4 914 aaKnown RBP6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 NBPF10Q6P3W6 841 aaKnown RBP6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 RINLQ6ZS11 566 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 STAG2Q8N3U4 1231 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 NBPF15Q8N660 670 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 NINJ1Q92982 152 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 RUNDC1Q96C34 613 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 ETNK1Q9HBU6 452 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 NPHS2Q9NP85 383 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 TIMMDC1Q9NPL8 285 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 ACTR10Q9NZ32 417 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 STK17AQ9UEE5 414 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 KIAA1107Q9UPP5 1409 aa6.49□□□□□ -1.37
VPS35P1-201ENST00000563400 DENND4BO75064 1496 aaPredicted RBP6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 LRRC9Q6ZRR7 1453 aa6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 MAGI2Q86UL8 1455 aa6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 ARHGAP5Q13017 1502 aa6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 CCDC163A0A0D9SF12 145 aa6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 A6NJY4 79 aa6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 GJB6O95452 261 aa6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 GARTP22102 1010 aa6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 NEK3P51956 506 aa6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 MORC3Q14149 939 aa6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 TLR1Q15399 786 aa6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 PRPF40BQ6NWY9 871 aaKnown RBP6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 RIPOR1Q6ZS17 1223 aa6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 VWA5B2Q8N398 1253 aa6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 CCDC8Q9H0W5 538 aaPredicted RBP6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 CDH19Q9H159 772 aa6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 SCHIP1Q9P0W5 487 aaPredicted RBP6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 TPX2Q9ULW0 747 aaKnown RBP6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 USP3Q9Y6I4 520 aa6.48□□□□□ -1.37
VPS35P1-201ENST00000563400 AKNAQ7Z591 1439 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms