RNA–Protein interactions for RNA: ENST00000563340.1

ATP2C2-204, Transcript of ATPase secretory pathway Ca2+ transporting 2, humanhuman

TSL 3

Gene ATP2C2, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C2-204ENST00000563340 PRKRIP1Q9H875 184 aaPredicted RBP16.84■□□□□ 0.29
ATP2C2-204ENST00000563340 DAGLAQ9Y4D2 1042 aa16.84■□□□□ 0.29
ATP2C2-204ENST00000563340 AFG3L2Q9Y4W6 797 aa16.84■□□□□ 0.29
ATP2C2-204ENST00000563340 SYN1P17600 705 aa16.83■□□□□ 0.28
ATP2C2-204ENST00000563340 LRRC24Q50LG9 513 aa16.83■□□□□ 0.28
ATP2C2-204ENST00000563340 WDR66Q8TBY9 1149 aa16.83■□□□□ 0.28
ATP2C2-204ENST00000563340 SUCLG2Q96I99 432 aa16.83■□□□□ 0.28
ATP2C2-204ENST00000563340 KIF16BQ96L93 1317 aa16.83■□□□□ 0.28
ATP2C2-204ENST00000563340 UBE2OQ9C0C9 1292 aaKnown RBP16.83■□□□□ 0.28
ATP2C2-204ENST00000563340 FAM198AQ9UFP1 575 aa16.83■□□□□ 0.28
ATP2C2-204ENST00000563340 HMGCRP04035 888 aa16.82■□□□□ 0.28
ATP2C2-204ENST00000563340 ANKRD13CQ8N6S4 541 aa16.82■□□□□ 0.28
ATP2C2-204ENST00000563340 C11orf49Q9H6J7 331 aa16.82■□□□□ 0.28
ATP2C2-204ENST00000563340 RPTORQ8N122 1335 aa16.81■□□□□ 0.28
ATP2C2-204ENST00000563340 FANCIQ9NVI1 1328 aa16.81■□□□□ 0.28
ATP2C2-204ENST00000563340 IFIT1P09914 478 aaKnown RBP16.81■□□□□ 0.28
ATP2C2-204ENST00000563340 DIXDC1Q155Q3 683 aa16.81■□□□□ 0.28
ATP2C2-204ENST00000563340 ZFPM1Q8IX07 1006 aa16.81■□□□□ 0.28
ATP2C2-204ENST00000563340 SRCIN1Q9C0H9 1055 aa16.81■□□□□ 0.28
ATP2C2-204ENST00000563340 HMX1Q9NP08 348 aaPredicted RBP16.81■□□□□ 0.28
ATP2C2-204ENST00000563340 USP40Q9NVE5 1235 aa16.81■□□□□ 0.28
ATP2C2-204ENST00000563340 SPTBN5Q9NRC6 3674 aaKnown RBP16.81■□□□□ 0.28
ATP2C2-204ENST00000563340 LAMA2P24043 3122 aaKnown RBP16.81■□□□□ 0.28
ATP2C2-204ENST00000563340 ATRNL1Q5VV63 1379 aa16.8■□□□□ 0.28
ATP2C2-204ENST00000563340 FGFR2P21802 821 aa16.8■□□□□ 0.28
ATP2C2-204ENST00000563340 PUM3Q15397 648 aaKnown RBP16.8■□□□□ 0.28
ATP2C2-204ENST00000563340 FAM110CQ1W6H9 321 aa16.8■□□□□ 0.28
ATP2C2-204ENST00000563340 RABL6Q3YEC7 729 aaPredicted RBP16.8■□□□□ 0.28
ATP2C2-204ENST00000563340 AGTPBP1Q9UPW5 1226 aa16.8■□□□□ 0.28
ATP2C2-204ENST00000563340 TRIM75PA6NK02 468 aa16.79■□□□□ 0.28
ATP2C2-204ENST00000563340 CTNND1O60716 968 aaKnown RBP16.79■□□□□ 0.28
ATP2C2-204ENST00000563340 NBPF7P0C2Y1 421 aaPredicted RBP16.79■□□□□ 0.28
ATP2C2-204ENST00000563340 ZEB1P37275 1124 aaPredicted RBP16.79■□□□□ 0.28
ATP2C2-204ENST00000563340 MAP3K10Q02779 954 aa16.79■□□□□ 0.28
ATP2C2-204ENST00000563340 SLC4A10Q6U841 1118 aa16.79■□□□□ 0.28
ATP2C2-204ENST00000563340 BICC1Q9H694 974 aaKnown RBP16.79■□□□□ 0.28
ATP2C2-204ENST00000563340 OGDHLQ9ULD0 1010 aa16.79■□□□□ 0.28
ATP2C2-204ENST00000563340 MGAMO43451 1857 aa16.79■□□□□ 0.28
ATP2C2-204ENST00000563340 UTYO14607 1347 aa16.78■□□□□ 0.28
ATP2C2-204ENST00000563340 POTEB2H3BUK9 544 aa16.78■□□□□ 0.28
ATP2C2-204ENST00000563340 FAM109BQ6ICB4 259 aaPredicted RBP16.78■□□□□ 0.28
ATP2C2-204ENST00000563340 GJD2Q9UKL4 321 aa16.78■□□□□ 0.28
ATP2C2-204ENST00000563340 PNMA3Q9UL41 463 aa16.78■□□□□ 0.28
ATP2C2-204ENST00000563340 LRRFIP2Q9Y608 721 aaKnown RBP16.78■□□□□ 0.28
ATP2C2-204ENST00000563340 ALPK3Q96L96 1907 aa16.78■□□□□ 0.28
ATP2C2-204ENST00000563340 ENTPD3O75355 529 aa16.77■□□□□ 0.28
ATP2C2-204ENST00000563340 PRDX5P30044 214 aa16.77■□□□□ 0.28
ATP2C2-204ENST00000563340 EXOSC9Q06265 439 aaKnown RBP16.77■□□□□ 0.28
ATP2C2-204ENST00000563340 TRIM32Q13049 653 aa16.77■□□□□ 0.28
ATP2C2-204ENST00000563340 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
ATP2C2-204ENST00000563340 IDI2Q9BXS1 227 aa16.77■□□□□ 0.28
ATP2C2-204ENST00000563340 TTC28Q96AY4 2481 aa16.76■□□□□ 0.27
ATP2C2-204ENST00000563340 LDHBP07195 334 aaKnown RBP16.76■□□□□ 0.27
ATP2C2-204ENST00000563340 GCLCP48506 637 aaPredicted RBP16.76■□□□□ 0.27
ATP2C2-204ENST00000563340 RGS3P49796 1198 aa16.76■□□□□ 0.27
ATP2C2-204ENST00000563340 TREML2Q5T2D2 321 aa16.76■□□□□ 0.27
ATP2C2-204ENST00000563340 SH3BP5LQ7L8J4 393 aa16.76■□□□□ 0.27
ATP2C2-204ENST00000563340 ANKRD44Q8N8A2 993 aa16.76■□□□□ 0.27
ATP2C2-204ENST00000563340 GUCD1Q96NT3 240 aa16.76■□□□□ 0.27
ATP2C2-204ENST00000563340 CACNA1FO60840 1977 aa16.76■□□□□ 0.27
ATP2C2-204ENST00000563340 PFASO15067 1338 aa16.75■□□□□ 0.27
ATP2C2-204ENST00000563340 SLC5A1P13866 664 aa16.75■□□□□ 0.27
ATP2C2-204ENST00000563340 ZSCAN29Q8IWY8 852 aaPredicted RBP16.75■□□□□ 0.27
ATP2C2-204ENST00000563340 PROCA1Q8NCQ7 364 aaPredicted RBP16.75■□□□□ 0.27
ATP2C2-204ENST00000563340 KLHDC4Q8TBB5 520 aa16.75■□□□□ 0.27
ATP2C2-204ENST00000563340 LPIN2Q92539 896 aa16.75■□□□□ 0.27
ATP2C2-204ENST00000563340 DOCK3Q8IZD9 2030 aa16.74■□□□□ 0.27
ATP2C2-204ENST00000563340 EYSQ5T1H1 3165 aa16.74■□□□□ 0.27
ATP2C2-204ENST00000563340 MAP3K21Q5TCX8 1036 aa16.74■□□□□ 0.27
ATP2C2-204ENST00000563340 SPINK5Q9NQ38 1064 aaPredicted RBP16.74■□□□□ 0.27
ATP2C2-204ENST00000563340 DDTLA6NHG4 134 aaPredicted RBP16.73■□□□□ 0.27
ATP2C2-204ENST00000563340 COL6A1P12109 1028 aa16.73■□□□□ 0.27
ATP2C2-204ENST00000563340 CCDC84Q86UT8 332 aaPredicted RBP16.73■□□□□ 0.27
ATP2C2-204ENST00000563340 WDR63Q8IWG1 891 aa16.73■□□□□ 0.27
ATP2C2-204ENST00000563340 TRIB2Q92519 343 aa16.73■□□□□ 0.27
ATP2C2-204ENST00000563340 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.73■□□□□ 0.27
ATP2C2-204ENST00000563340 SALL1Q9NSC2 1324 aa16.72■□□□□ 0.27
ATP2C2-204ENST00000563340 PRUNE2Q8WUY3 3088 aa16.72■□□□□ 0.27
ATP2C2-204ENST00000563340 SLURP2P0DP57 97 aa16.72■□□□□ 0.27
ATP2C2-204ENST00000563340 PRKAR2AP13861 404 aaKnown RBP16.72■□□□□ 0.27
ATP2C2-204ENST00000563340 MDM2Q00987 491 aaPredicted RBP16.72■□□□□ 0.27
ATP2C2-204ENST00000563340 PABPC4Q13310 644 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATP2C2-204ENST00000563340 PRDM6Q9NQX0 595 aa16.72■□□□□ 0.27
ATP2C2-204ENST00000563340 GNL3LQ9NVN8 582 aaKnown RBP16.72■□□□□ 0.27
ATP2C2-204ENST00000563340 AK9Q5TCS8 1911 aa16.72■□□□□ 0.27
ATP2C2-204ENST00000563340 XRCC5P13010 732 aaKnown RBP16.71■□□□□ 0.27
ATP2C2-204ENST00000563340 SPP2Q13103 211 aa16.71■□□□□ 0.27
ATP2C2-204ENST00000563340 LRRC26Q2I0M4 334 aa16.71■□□□□ 0.27
ATP2C2-204ENST00000563340 FAM161BQ96MY7 647 aa16.71■□□□□ 0.27
ATP2C2-204ENST00000563340 ASCC2Q9H1I8 757 aaPredicted RBP16.71■□□□□ 0.27
ATP2C2-204ENST00000563340 GAKO14976 1311 aa16.7■□□□□ 0.26
ATP2C2-204ENST00000563340 RFX7Q2KHR2 1363 aa16.7■□□□□ 0.26
ATP2C2-204ENST00000563340 EYA2O00167 538 aa16.7■□□□□ 0.26
ATP2C2-204ENST00000563340 TBC1D12O60347 775 aa16.7■□□□□ 0.26
ATP2C2-204ENST00000563340 CYP2B6P20813 491 aa16.7■□□□□ 0.26
ATP2C2-204ENST00000563340 ZNF280CQ8ND82 737 aa16.7■□□□□ 0.26
ATP2C2-204ENST00000563340 DDX4Q9NQI0 724 aaKnown RBP16.7■□□□□ 0.26
ATP2C2-204ENST00000563340 MORF4L1Q9UBU8 362 aa16.7■□□□□ 0.26
ATP2C2-204ENST00000563340 MUC3AQ02505 3323 aa16.69■□□□□ 0.26
ATP2C2-204ENST00000563340 SEMA3EO15041 775 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms