RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 DLGAP5Q15398 846 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 CCDC93Q567U6 631 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 CCDC24Q8N4L8 307 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 ARHGEF10LQ9HCE6 1279 aa8.66□□□□□ -1.02
TCF4-216ENST00000562680 TRIM75PA6NK02 468 aa8.65□□□□□ -1.02
TCF4-216ENST00000562680 CAMTA2O94983 1202 aa8.65□□□□□ -1.02
TCF4-216ENST00000562680 ADORA1P30542 326 aa8.65□□□□□ -1.02
TCF4-216ENST00000562680 FNBP4Q8N3X1 1017 aaPredicted RBP8.65□□□□□ -1.02
TCF4-216ENST00000562680 CALML4Q96GE6 196 aa8.65□□□□□ -1.02
TCF4-216ENST00000562680 TTF2Q9UNY4 1162 aaKnown RBP8.65□□□□□ -1.02
TCF4-216ENST00000562680 MMP10P09238 476 aa8.65□□□□□ -1.02
TCF4-216ENST00000562680 PDIA6Q15084 440 aa8.65□□□□□ -1.02
TCF4-216ENST00000562680 CCDC144CPQ8IYA2 1237 aa8.65□□□□□ -1.02
TCF4-216ENST00000562680 RTKN2Q8IZC4 609 aa8.65□□□□□ -1.02
TCF4-216ENST00000562680 TIGD1Q96MW7 591 aa8.65□□□□□ -1.02
TCF4-216ENST00000562680 GRPEL1Q9HAV7 217 aa8.65□□□□□ -1.02
TCF4-216ENST00000562680 PXDNQ92626 1479 aa8.65□□□□□ -1.02
TCF4-216ENST00000562680 CSF1RP07333 972 aa8.65□□□□□ -1.02
TCF4-216ENST00000562680 UBA7P41226 1012 aa8.65□□□□□ -1.02
TCF4-216ENST00000562680 LARP6Q9BRS8 491 aaKnown RBP8.65□□□□□ -1.02
TCF4-216ENST00000562680 BRIP1Q9BX63 1249 aa8.65□□□□□ -1.02
TCF4-216ENST00000562680 PNMA2Q9UL42 364 aa8.65□□□□□ -1.02
TCF4-216ENST00000562680 FGFR1OPO95684 399 aaKnown RBP8.65□□□□□ -1.03
TCF4-216ENST00000562680 FOXO4P98177 505 aa8.65□□□□□ -1.03
TCF4-216ENST00000562680 TTLL5Q6EMB2 1281 aa8.65□□□□□ -1.03
TCF4-216ENST00000562680 ERMNQ8TAM6 284 aa8.65□□□□□ -1.03
TCF4-216ENST00000562680 NFAT5O94916 1531 aa8.65□□□□□ -1.03
TCF4-216ENST00000562680 KRT2P35908 639 aa8.65□□□□□ -1.03
TCF4-216ENST00000562680 NAPAP54920 295 aa8.65□□□□□ -1.03
TCF4-216ENST00000562680 TXLNBQ8N3L3 684 aa8.65□□□□□ -1.03
TCF4-216ENST00000562680 RILPL1Q5EBL4 403 aa8.64□□□□□ -1.03
TCF4-216ENST00000562680 GIMAP6Q6P9H5 292 aa8.64□□□□□ -1.03
TCF4-216ENST00000562680 EDC3Q96F86 508 aaKnown RBP8.64□□□□□ -1.03
TCF4-216ENST00000562680 MED23Q9ULK4 1368 aa8.64□□□□□ -1.03
TCF4-216ENST00000562680 BCL9O00512 1426 aa8.64□□□□□ -1.03
TCF4-216ENST00000562680 ESPNB1AK53 854 aa8.64□□□□□ -1.03
TCF4-216ENST00000562680 SYT1P21579 422 aa8.64□□□□□ -1.03
TCF4-216ENST00000562680 MSL1Q68DK7 614 aa8.64□□□□□ -1.03
TCF4-216ENST00000562680 MCTP2Q6DN12 878 aa8.64□□□□□ -1.03
TCF4-216ENST00000562680 CNNM3Q8NE01 707 aa8.64□□□□□ -1.03
TCF4-216ENST00000562680 MRPS27Q92552 414 aaKnown RBP8.64□□□□□ -1.03
TCF4-216ENST00000562680 CCDC17Q96LX7 622 aa8.64□□□□□ -1.03
TCF4-216ENST00000562680 TLR7Q9NYK1 1049 aaKnown RBP8.64□□□□□ -1.03
TCF4-216ENST00000562680 MTA3Q9BTC8 594 aa8.64□□□□□ -1.03
TCF4-216ENST00000562680 MED1Q15648 1581 aaPredicted RBP8.64□□□□□ -1.03
TCF4-216ENST00000562680 GPS2Q13227 327 aa8.64□□□□□ -1.03
TCF4-216ENST00000562680 CTR9Q6PD62 1173 aa8.64□□□□□ -1.03
TCF4-216ENST00000562680 MNS1Q8NEH6 495 aa8.64□□□□□ -1.03
TCF4-216ENST00000562680 CRAMP1Q96RY5 1269 aa8.64□□□□□ -1.03
TCF4-216ENST00000562680 UQCRHLA0A096LP55 91 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 UQCRHP07919 91 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 RBM26Q5T8P6 1007 aaKnown RBP8.63□□□□□ -1.03
TCF4-216ENST00000562680 TBC1D9BQ66K14 1250 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 HOMER1Q86YM7 354 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 SERPINC1P01008 464 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 SLC16A10Q8TF71 515 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 ZNF512BQ96KM6 892 aaPredicted RBP8.63□□□□□ -1.03
TCF4-216ENST00000562680 VAT1LQ9HCJ6 419 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 LUC7LQ9NQ29 371 aaKnown RBP8.63□□□□□ -1.03
TCF4-216ENST00000562680 TFIP11Q9UBB9 837 aaKnown RBP8.63□□□□□ -1.03
TCF4-216ENST00000562680 MYO3BQ8WXR4 1341 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 H7C1D1 291 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 FGAP02671 866 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 NFIXQ14938 502 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 UVSSAQ2YD98 709 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 HEATR3Q7Z4Q2 680 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 USP40Q9NVE5 1235 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 RMND1Q9NWS8 449 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 SWAP70Q9UH65 585 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 JAG2Q9Y219 1238 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 PIK3C2AO00443 1686 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 USP17L12C9JPN9 530 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 USP17L21D6R901 530 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 SSBP05455 408 aaKnown RBP eCLIP8.63□□□□□ -1.03
TCF4-216ENST00000562680 KCNA4P22459 653 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 PTH1RQ03431 593 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 STX1AQ16623 288 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 GTF3C6Q969F1 213 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 SPTLC2O15270 562 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 PFKFB2O60825 505 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 OFD1O75665 1012 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 UTP14CQ5TAP6 766 aaKnown RBP8.63□□□□□ -1.03
TCF4-216ENST00000562680 STXBP4Q6ZWJ1 553 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 TTLL6Q8N841 843 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 ZNHIT6Q9NWK9 470 aaKnown RBP8.63□□□□□ -1.03
TCF4-216ENST00000562680 MINPP1Q9UNW1 487 aa8.63□□□□□ -1.03
TCF4-216ENST00000562680 PPP1R12BO60237 982 aaPredicted RBP8.62□□□□□ -1.03
TCF4-216ENST00000562680 DDAH1O94760 285 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 SUGT1Q9Y2Z0 365 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 NDUFB9Q9Y6M9 179 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 KCNQ4P56696 695 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 DCAF15Q66K64 600 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 WWC2Q6AWC2 1192 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 CCDC70Q6NSX1 233 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 RAB11FIP4Q86YS3 637 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 TGFBRAP1Q8WUH2 860 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 TSG101Q99816 390 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 SHPRHQ149N8 1683 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 SYCE3A1L190 88 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 BTDP43251 543 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms