RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 DIXDC1Q155Q3 683 aa23.12■■□□□ 1.29
KATNB1-202ENST00000562542 SCYL3Q8IZE3 742 aa23.12■■□□□ 1.29
KATNB1-202ENST00000562542 VGLL2Q8N8G2 317 aa23.12■■□□□ 1.29
KATNB1-202ENST00000562542 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.12■■□□□ 1.292e-6■■■■■ 36
KATNB1-202ENST00000562542 USP40Q9NVE5 1235 aa23.12■■□□□ 1.29
KATNB1-202ENST00000562542 NBPF7P0C2Y1 421 aaPredicted RBP23.11■■□□□ 1.29
KATNB1-202ENST00000562542 PUM3Q15397 648 aaKnown RBP23.11■■□□□ 1.29
KATNB1-202ENST00000562542 FAM198AQ9UFP1 575 aa23.11■■□□□ 1.29
KATNB1-202ENST00000562542 SLC45A1Q9Y2W3 748 aa23.11■■□□□ 1.29
KATNB1-202ENST00000562542 SYN1P17600 705 aa23.1■■□□□ 1.29
KATNB1-202ENST00000562542 PTPRAP18433 802 aa23.1■■□□□ 1.29
KATNB1-202ENST00000562542 ANKRD13CQ8N6S4 541 aa23.1■■□□□ 1.29
KATNB1-202ENST00000562542 ZSCAN29Q8IWY8 852 aaPredicted RBP23.09■■□□□ 1.29
KATNB1-202ENST00000562542 ZFPM1Q8IX07 1006 aa23.09■■□□□ 1.29
KATNB1-202ENST00000562542 ANKLE1Q8NAG6 615 aa23.09■■□□□ 1.29
KATNB1-202ENST00000562542 SALL2Q9Y467 1007 aaPredicted RBP23.09■■□□□ 1.29
KATNB1-202ENST00000562542 AFG3L2Q9Y4W6 797 aa23.09■■□□□ 1.29
KATNB1-202ENST00000562542 LRRFIP2Q9Y608 721 aaKnown RBP23.09■■□□□ 1.29
KATNB1-202ENST00000562542 KIF16BQ96L93 1317 aa23.08■■□□□ 1.29
KATNB1-202ENST00000562542 ALPK3Q96L96 1907 aa23.08■■□□□ 1.29
KATNB1-202ENST00000562542 TRIM75PA6NK02 468 aa23.08■■□□□ 1.29
KATNB1-202ENST00000562542 MAGEA10P43363 369 aaPredicted RBP23.08■■□□□ 1.29
KATNB1-202ENST00000562542 LRIT3Q3SXY7 679 aa23.08■■□□□ 1.29
KATNB1-202ENST00000562542 TDHQ8IZJ6 230 aa23.08■■□□□ 1.29
KATNB1-202ENST00000562542 KLHDC4Q8TBB5 520 aa23.08■■□□□ 1.29
KATNB1-202ENST00000562542 NBPF3Q9H094 633 aa23.08■■□□□ 1.29
KATNB1-202ENST00000562542 MTMR10Q9NXD2 777 aa23.08■■□□□ 1.29
KATNB1-202ENST00000562542 PHF20L1A8MW92 1017 aa23.07■■□□□ 1.28
KATNB1-202ENST00000562542 SLC5A1P13866 664 aa23.07■■□□□ 1.28
KATNB1-202ENST00000562542 RABL6Q3YEC7 729 aaPredicted RBP23.07■■□□□ 1.28
KATNB1-202ENST00000562542 UBE2OQ9C0C9 1292 aaKnown RBP23.07■■□□□ 1.28
KATNB1-202ENST00000562542 HMGCRP04035 888 aa23.06■■□□□ 1.28
KATNB1-202ENST00000562542 LDHBP07195 334 aaKnown RBP23.06■■□□□ 1.28
KATNB1-202ENST00000562542 PRDX5P30044 214 aa23.06■■□□□ 1.28
KATNB1-202ENST00000562542 ANKRD44Q8N8A2 993 aa23.06■■□□□ 1.28
KATNB1-202ENST00000562542 C11orf49Q9H6J7 331 aa23.06■■□□□ 1.28
KATNB1-202ENST00000562542 FGFR2P21802 821 aa23.05■■□□□ 1.28
KATNB1-202ENST00000562542 RGS3P49796 1198 aa23.05■■□□□ 1.28
KATNB1-202ENST00000562542 COL25A1Q9BXS0 654 aaPredicted RBP23.05■■□□□ 1.28
KATNB1-202ENST00000562542 HMX1Q9NP08 348 aaPredicted RBP23.05■■□□□ 1.28
KATNB1-202ENST00000562542 PNMA3Q9UL41 463 aa23.05■■□□□ 1.28
KATNB1-202ENST00000562542 AGTPBP1Q9UPW5 1226 aa23.05■■□□□ 1.28
KATNB1-202ENST00000562542 UTYO14607 1347 aa23.05■■□□□ 1.28
KATNB1-202ENST00000562542 FAM110CQ1W6H9 321 aa23.04■■□□□ 1.28
KATNB1-202ENST00000562542 WDR63Q8IWG1 891 aa23.04■■□□□ 1.28
KATNB1-202ENST00000562542 LPIN2Q92539 896 aa23.04■■□□□ 1.28
KATNB1-202ENST00000562542 MYH13Q9UKX3 1938 aa23.04■■□□□ 1.28
KATNB1-202ENST00000562542 ATRNL1Q5VV63 1379 aa23.03■■□□□ 1.28
KATNB1-202ENST00000562542 RPTORQ8N122 1335 aa23.03■■□□□ 1.28
KATNB1-202ENST00000562542 DOCK2Q92608 1830 aa23.03■■□□□ 1.28
KATNB1-202ENST00000562542 CTNND1O60716 968 aaKnown RBP23.02■■□□□ 1.28
KATNB1-202ENST00000562542 ENTPD3O75355 529 aa23.02■■□□□ 1.28
KATNB1-202ENST00000562542 TREML2Q5T2D2 321 aa23.02■■□□□ 1.28
KATNB1-202ENST00000562542 CCDC84Q86UT8 332 aaPredicted RBP23.02■■□□□ 1.28
KATNB1-202ENST00000562542 GNL3LQ9NVN8 582 aaKnown RBP23.02■■□□□ 1.28
KATNB1-202ENST00000562542 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.02■■□□□ 1.28
KATNB1-202ENST00000562542 CCDC184Q52MB2 194 aa23.01■■□□□ 1.27
KATNB1-202ENST00000562542 NCBP3Q53F19 620 aaKnown RBP23.01■■□□□ 1.27
KATNB1-202ENST00000562542 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.01■■□□□ 1.27
KATNB1-202ENST00000562542 UNC80Q8N2C7 3258 aa23.01■■□□□ 1.27
KATNB1-202ENST00000562542 TRIM32Q13049 653 aa23■■□□□ 1.27
KATNB1-202ENST00000562542 IDI2Q9BXS1 227 aa23■■□□□ 1.27
KATNB1-202ENST00000562542 DDX60LQ5H9U9 1706 aaKnown RBP22.99■■□□□ 1.27
KATNB1-202ENST00000562542 SLURP2P0DP57 97 aa22.99■■□□□ 1.27
KATNB1-202ENST00000562542 PICALMQ13492 652 aa22.99■■□□□ 1.27
KATNB1-202ENST00000562542 SH3BP5LQ7L8J4 393 aa22.99■■□□□ 1.27
KATNB1-202ENST00000562542 DOCK1Q14185 1865 aa22.98■■□□□ 1.27
KATNB1-202ENST00000562542 EYA2O00167 538 aa22.98■■□□□ 1.27
KATNB1-202ENST00000562542 GCLCP48506 637 aaPredicted RBP22.98■■□□□ 1.27
KATNB1-202ENST00000562542 PTPRFP10586 1907 aa22.98■■□□□ 1.27
KATNB1-202ENST00000562542 DDTLA6NHG4 134 aaPredicted RBP22.97■■□□□ 1.27
KATNB1-202ENST00000562542 PABPC4Q13310 644 aaKnown RBP eCLIP22.97■■□□□ 1.27
KATNB1-202ENST00000562542 DZIP1Q86YF9 867 aaKnown RBP22.97■■□□□ 1.27
KATNB1-202ENST00000562542 PROCA1Q8NCQ7 364 aaPredicted RBP22.97■■□□□ 1.27
KATNB1-202ENST00000562542 OGDHLQ9ULD0 1010 aa22.97■■□□□ 1.27
KATNB1-202ENST00000562542 DOCK3Q8IZD9 2030 aa22.97■■□□□ 1.27
KATNB1-202ENST00000562542 MAP3K10Q02779 954 aa22.96■■□□□ 1.27
KATNB1-202ENST00000562542 DENND2AQ9ULE3 1009 aa22.96■■□□□ 1.27
KATNB1-202ENST00000562542 SALL1Q9NSC2 1324 aa22.96■■□□□ 1.27
KATNB1-202ENST00000562542 SPP2Q13103 211 aa22.95■■□□□ 1.26
KATNB1-202ENST00000562542 ATP2B3Q16720 1220 aa22.95■■□□□ 1.26
KATNB1-202ENST00000562542 ZGPATQ8N5A5 531 aaKnown RBP22.95■■□□□ 1.26
KATNB1-202ENST00000562542 TRIB2Q92519 343 aa22.95■■□□□ 1.26
KATNB1-202ENST00000562542 GJD2Q9UKL4 321 aa22.95■■□□□ 1.26
KATNB1-202ENST00000562542 RFX7Q2KHR2 1363 aa22.94■■□□□ 1.26
KATNB1-202ENST00000562542 PFASO15067 1338 aa22.94■■□□□ 1.26
KATNB1-202ENST00000562542 PRKAR2AP13861 404 aaKnown RBP22.94■■□□□ 1.26
KATNB1-202ENST00000562542 CYP2B6P20813 491 aa22.94■■□□□ 1.26
KATNB1-202ENST00000562542 HMGCS2P54868 508 aa22.94■■□□□ 1.26
KATNB1-202ENST00000562542 MDM2Q00987 491 aaPredicted RBP22.94■■□□□ 1.26
KATNB1-202ENST00000562542 SLF2Q8IX21 1173 aa22.94■■□□□ 1.26
KATNB1-202ENST00000562542 DDX4Q9NQI0 724 aaKnown RBP22.94■■□□□ 1.26
KATNB1-202ENST00000562542 PHIPQ8WWQ0 1821 aa22.94■■□□□ 1.26
KATNB1-202ENST00000562542 GAKO14976 1311 aa22.93■■□□□ 1.26
KATNB1-202ENST00000562542 FAM196BA6NMK8 535 aa22.93■■□□□ 1.26
KATNB1-202ENST00000562542 SEMA3EO15041 775 aa22.93■■□□□ 1.26
KATNB1-202ENST00000562542 ZNF280CQ8ND82 737 aa22.93■■□□□ 1.26
KATNB1-202ENST00000562542 FAM161BQ96MY7 647 aa22.93■■□□□ 1.26
KATNB1-202ENST00000562542 SIL1Q9H173 461 aa22.93■■□□□ 1.26
KATNB1-202ENST00000562542 ASCC2Q9H1I8 757 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms