RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 TESPA1A2RU30 521 aaPredicted RBP29.1■■■□□ 2.25
CDR2-202ENST00000561630 RRP1P56182 461 aaKnown RBP29.1■■■□□ 2.25
CDR2-202ENST00000561630 PICALMQ13492 652 aa29.1■■■□□ 2.25
CDR2-202ENST00000561630 ERO1BQ86YB8 467 aa29.1■■■□□ 2.25
CDR2-202ENST00000561630 MS4A4AQ96JQ5 239 aa29.1■■■□□ 2.25
CDR2-202ENST00000561630 IGF2BP3O00425 579 aaKnown RBP eCLIP29.09■■■□□ 2.25
CDR2-202ENST00000561630 OTUD5Q96G74 571 aa29.09■■■□□ 2.25
CDR2-202ENST00000561630 DDTLA6NHG4 134 aaPredicted RBP29.08■■■□□ 2.25
CDR2-202ENST00000561630 IFIT2P09913 472 aaKnown RBP29.08■■■□□ 2.25
CDR2-202ENST00000561630 INPP5BP32019 993 aa29.08■■■□□ 2.25
CDR2-202ENST00000561630 NOM1Q5C9Z4 860 aaKnown RBP29.08■■■□□ 2.25
CDR2-202ENST00000561630 ZSCAN29Q8IWY8 852 aaPredicted RBP29.08■■■□□ 2.25
CDR2-202ENST00000561630 NOL10Q9BSC4 688 aaKnown RBP29.08■■■□□ 2.25
CDR2-202ENST00000561630 BAG3O95817 575 aa29.07■■■□□ 2.24
CDR2-202ENST00000561630 GTF2A2P52657 109 aa29.07■■■□□ 2.24
CDR2-202ENST00000561630 PPP4CP60510 307 aa29.07■■■□□ 2.24
CDR2-202ENST00000561630 MAP3K10Q02779 954 aa29.07■■■□□ 2.24
CDR2-202ENST00000561630 ADGRA1Q86SQ6 560 aa29.07■■■□□ 2.24
CDR2-202ENST00000561630 PTPN18Q99952 460 aa29.07■■■□□ 2.24
CDR2-202ENST00000561630 NDUFB9Q9Y6M9 179 aa29.07■■■□□ 2.24
CDR2-202ENST00000561630 OTUD7BQ6GQQ9 843 aa29.06■■■□□ 2.24
CDR2-202ENST00000561630 TEX11Q8IYF3 940 aa29.06■■■□□ 2.24
CDR2-202ENST00000561630 AATFQ9NY61 560 aaKnown RBP eCLIP29.06■■■□□ 2.24
CDR2-202ENST00000561630 CASP8AP2Q9UKL3 1982 aa29.05■■■□□ 2.24
CDR2-202ENST00000561630 IDH1O75874 414 aaKnown RBP29.05■■■□□ 2.24
CDR2-202ENST00000561630 PLCG2P16885 1265 aa29.05■■■□□ 2.24
CDR2-202ENST00000561630 SH3RF3Q8TEJ3 882 aaPredicted RBP29.05■■■□□ 2.24
CDR2-202ENST00000561630 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.05■■■□□ 2.24
CDR2-202ENST00000561630 R3HDMLQ9H3Y0 253 aa29.05■■■□□ 2.24
CDR2-202ENST00000561630 ANTXR1Q9H6X2 564 aa29.05■■■□□ 2.24
CDR2-202ENST00000561630 PHF20L1A8MW92 1017 aa29.04■■■□□ 2.24
CDR2-202ENST00000561630 GPR25O00155 361 aa29.04■■■□□ 2.24
CDR2-202ENST00000561630 CAPN15O75808 1086 aa29.04■■■□□ 2.24
CDR2-202ENST00000561630 PPATQ06203 517 aa29.04■■■□□ 2.24
CDR2-202ENST00000561630 PPIL2Q13356 520 aa29.04■■■□□ 2.24
CDR2-202ENST00000561630 NOL9Q5SY16 702 aaKnown RBP29.04■■■□□ 2.24
CDR2-202ENST00000561630 TMED8Q6PL24 325 aaPredicted RBP29.04■■■□□ 2.24
CDR2-202ENST00000561630 ZNF296Q8WUU4 475 aaPredicted RBP29.04■■■□□ 2.24
CDR2-202ENST00000561630 BRI3BPQ8WY22 251 aa29.04■■■□□ 2.24
CDR2-202ENST00000561630 OSBPL5Q9H0X9 879 aaPredicted RBP29.04■■■□□ 2.24
CDR2-202ENST00000561630 LAMB1P07942 1786 aa29.03■■■□□ 2.24
CDR2-202ENST00000561630 IRF6O14896 467 aa29.03■■■□□ 2.24
CDR2-202ENST00000561630 CYP7A1P22680 504 aa29.03■■■□□ 2.24
CDR2-202ENST00000561630 ABHD8Q96I13 439 aa29.03■■■□□ 2.24
CDR2-202ENST00000561630 LRRCC1Q9C099 1032 aa29.03■■■□□ 2.24
CDR2-202ENST00000561630 MCOLN1Q9GZU1 580 aa29.03■■■□□ 2.24
CDR2-202ENST00000561630 BCL11AQ9H165 835 aa29.03■■■□□ 2.24
CDR2-202ENST00000561630 COL2A1P02458 1487 aaPredicted RBP29.03■■■□□ 2.24
CDR2-202ENST00000561630 CCL15-CCL14A0A0B4J2E2 113 aa29.02■■■□□ 2.24
CDR2-202ENST00000561630 MAP3K12Q12852 859 aa29.02■■■□□ 2.24
CDR2-202ENST00000561630 DGKZQ13574 1117 aa29.02■■■□□ 2.24
CDR2-202ENST00000561630 CCL15Q16663 113 aa29.02■■■□□ 2.24
CDR2-202ENST00000561630 MAST2Q6P0Q8 1798 aa29.02■■■□□ 2.24
CDR2-202ENST00000561630 SNAPC2Q13487 334 aa29.01■■■□□ 2.23
CDR2-202ENST00000561630 TTF1Q15361 905 aaPredicted RBP29.01■■■□□ 2.23
CDR2-202ENST00000561630 MAGEB6Q8N7X4 407 aa29.01■■■□□ 2.23
CDR2-202ENST00000561630 DCTPP1Q9H773 170 aa29.01■■■□□ 2.23
CDR2-202ENST00000561630 TBC1D12O60347 775 aa29■■■□□ 2.23
CDR2-202ENST00000561630 CETPP11597 493 aa29■■■□□ 2.23
CDR2-202ENST00000561630 SLURP2P0DP57 97 aa28.99■■■□□ 2.23
CDR2-202ENST00000561630 CTU1Q7Z7A3 348 aaKnown RBP28.99■■■□□ 2.23
CDR2-202ENST00000561630 FKTNO75072 461 aa28.98■■■□□ 2.23
CDR2-202ENST00000561630 CRHR2Q13324 411 aa28.98■■■□□ 2.23
CDR2-202ENST00000561630 CERS3Q8IU89 383 aa28.98■■■□□ 2.23
CDR2-202ENST00000561630 SCYL3Q8IZE3 742 aa28.98■■■□□ 2.23
CDR2-202ENST00000561630 TGFBRAP1Q8WUH2 860 aa28.98■■■□□ 2.23
CDR2-202ENST00000561630 KCNH4Q9UQ05 1017 aa28.98■■■□□ 2.23
CDR2-202ENST00000561630 PCDHB15Q9Y5E8 787 aa28.98■■■□□ 2.23
CDR2-202ENST00000561630 AK9Q5TCS8 1911 aa28.97■■■□□ 2.23
CDR2-202ENST00000561630 SMARCA5O60264 1052 aaPredicted RBP28.97■■■□□ 2.23
CDR2-202ENST00000561630 CTNND1O60716 968 aaKnown RBP28.97■■■□□ 2.23
CDR2-202ENST00000561630 ATP5JP18859 108 aa28.97■■■□□ 2.23
CDR2-202ENST00000561630 DYNLL1P63167 89 aaKnown RBP28.97■■■□□ 2.23
CDR2-202ENST00000561630 DNAJC2Q99543 621 aaKnown RBP28.97■■■□□ 2.23
CDR2-202ENST00000561630 DHX36Q9H2U1 1008 aaKnown RBP28.97■■■□□ 2.23
CDR2-202ENST00000561630 DOCK2Q92608 1830 aa28.97■■■□□ 2.23
CDR2-202ENST00000561630 GOLIM4O00461 696 aa28.96■■■□□ 2.23
CDR2-202ENST00000561630 MAPKAPK5Q8IW41 473 aa28.96■■■□□ 2.23
CDR2-202ENST00000561630 FAM43AQ8N2R8 423 aa28.96■■■□□ 2.23
CDR2-202ENST00000561630 MIGA1Q8NAN2 632 aa28.96■■■□□ 2.23
CDR2-202ENST00000561630 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.96■■■□□ 2.23
CDR2-202ENST00000561630 PICK1Q9NRD5 415 aa28.96■■■□□ 2.23
CDR2-202ENST00000561630 FLT1P17948 1338 aa28.95■■■□□ 2.23
CDR2-202ENST00000561630 PI4KBQ9UBF8 816 aa28.95■■■□□ 2.22
CDR2-202ENST00000561630 PTPRAP18433 802 aa28.94■■■□□ 2.22
CDR2-202ENST00000561630 CRBNQ96SW2 442 aa28.94■■■□□ 2.22
CDR2-202ENST00000561630 BOLA2Q9H3K6 86 aa28.94■■■□□ 2.22
CDR2-202ENST00000561630 ZCCHC17Q9NP64 241 aaKnown RBP28.94■■■□□ 2.22
CDR2-202ENST00000561630 FAM196BA6NMK8 535 aa28.93■■■□□ 2.22
CDR2-202ENST00000561630 BTBD19C9JJ37 291 aa28.93■■■□□ 2.22
CDR2-202ENST00000561630 PDE6AP16499 860 aa28.93■■■□□ 2.22
CDR2-202ENST00000561630 SLC9C2Q5TAH2 1124 aa28.93■■■□□ 2.22
CDR2-202ENST00000561630 HAUS7Q99871 368 aa28.93■■■□□ 2.22
CDR2-202ENST00000561630 HERC5Q9UII4 1024 aaKnown RBP28.93■■■□□ 2.22
CDR2-202ENST00000561630 ZHX2Q9Y6X8 837 aa28.93■■■□□ 2.22
CDR2-202ENST00000561630 MYO5AQ9Y4I1 1855 aaKnown RBP28.92■■■□□ 2.22
CDR2-202ENST00000561630 CXCL11O14625 94 aa28.92■■■□□ 2.22
CDR2-202ENST00000561630 TAF1CQ15572 869 aaPredicted RBP28.92■■■□□ 2.22
CDR2-202ENST00000561630 EDC3Q96F86 508 aaKnown RBP28.92■■■□□ 2.22
CDR2-202ENST00000561630 ZFYVE28Q9HCC9 887 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms