RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 BCRP11274 1271 aa8.53□□□□□ -1.04
LRRC28-220ENST00000561253 GSTT1P30711 240 aa8.53□□□□□ -1.04
LRRC28-220ENST00000561253 FCGRTP55899 365 aa8.53□□□□□ -1.04
LRRC28-220ENST00000561253 PRPF40BQ6NWY9 871 aaKnown RBP8.53□□□□□ -1.04
LRRC28-220ENST00000561253 C1orf229Q6ZS94 237 aaPredicted RBP8.53□□□□□ -1.04
LRRC28-220ENST00000561253 GLIS3Q8NEA6 775 aa8.53□□□□□ -1.04
LRRC28-220ENST00000561253 ASAP3Q8TDY4 903 aa8.53□□□□□ -1.04
LRRC28-220ENST00000561253 NUDT8Q8WV74 236 aa8.53□□□□□ -1.04
LRRC28-220ENST00000561253 NXPE3Q969Y0 559 aa8.53□□□□□ -1.04
LRRC28-220ENST00000561253 TCF12Q99081 682 aa8.53□□□□□ -1.04
LRRC28-220ENST00000561253 BACH2Q9BYV9 841 aa8.53□□□□□ -1.04
LRRC28-220ENST00000561253 BHLHE41Q9C0J9 482 aaPredicted RBP8.53□□□□□ -1.04
LRRC28-220ENST00000561253 ALKQ9UM73 1620 aa8.53□□□□□ -1.04
LRRC28-220ENST00000561253 ADGRB1O14514 1584 aa8.52□□□□□ -1.04
LRRC28-220ENST00000561253 NWD1Q149M9 1564 aa8.52□□□□□ -1.04
LRRC28-220ENST00000561253 PIK3R4Q99570 1358 aa8.52□□□□□ -1.05
LRRC28-220ENST00000561253 FAM177BA6PVY3 158 aa8.52□□□□□ -1.05
LRRC28-220ENST00000561253 AMPD1P23109 780 aa8.52□□□□□ -1.05
LRRC28-220ENST00000561253 KANK3Q6NY19 840 aa8.52□□□□□ -1.05
LRRC28-220ENST00000561253 DTHD1Q6ZMT9 781 aa8.52□□□□□ -1.05
LRRC28-220ENST00000561253 TMEM87AQ8NBN3 555 aa8.52□□□□□ -1.05
LRRC28-220ENST00000561253 DCAF11Q8TEB1 546 aa8.52□□□□□ -1.05
LRRC28-220ENST00000561253 CRELD1Q96HD1 420 aa8.52□□□□□ -1.05
LRRC28-220ENST00000561253 POP1Q99575 1024 aaKnown RBP8.52□□□□□ -1.05
LRRC28-220ENST00000561253 C14orf93Q9H972 538 aaKnown RBP8.52□□□□□ -1.05
LRRC28-220ENST00000561253 JPH1Q9HDC5 661 aaPredicted RBP8.52□□□□□ -1.05
LRRC28-220ENST00000561253 ABCB6Q9NP58 842 aa8.52□□□□□ -1.05
LRRC28-220ENST00000561253 LRRC4BQ9NT99 713 aa8.52□□□□□ -1.05
LRRC28-220ENST00000561253 STRCP1A6NGW2 1772 aa8.51□□□□□ -1.05
LRRC28-220ENST00000561253 TMEM238LA0A1B0GVL6 79 aa8.51□□□□□ -1.05
LRRC28-220ENST00000561253 METTL12A8MUP2 240 aa8.51□□□□□ -1.05
LRRC28-220ENST00000561253 CELA2BP08218 269 aaPredicted RBP8.51□□□□□ -1.05
LRRC28-220ENST00000561253 XRCC5P13010 732 aaKnown RBP8.51□□□□□ -1.05
LRRC28-220ENST00000561253 MAP3K10Q02779 954 aa8.51□□□□□ -1.05
LRRC28-220ENST00000561253 LYPD4Q6UWN0 246 aa8.51□□□□□ -1.05
LRRC28-220ENST00000561253 CHSY3Q70JA7 882 aa8.51□□□□□ -1.05
LRRC28-220ENST00000561253 TTC9Q92623 222 aa8.51□□□□□ -1.05
LRRC28-220ENST00000561253 ZFYVE1Q9HBF4 777 aa8.51□□□□□ -1.05
LRRC28-220ENST00000561253 TECPR2O15040 1411 aa8.51□□□□□ -1.05
LRRC28-220ENST00000561253 A0A096LPE4 126 aa8.5□□□□□ -1.05
LRRC28-220ENST00000561253 A0A1W2PPZ6 126 aa8.5□□□□□ -1.05
LRRC28-220ENST00000561253 ALBP02768 609 aa8.5□□□□□ -1.05
LRRC28-220ENST00000561253 KCNA6P17658 529 aa8.5□□□□□ -1.05
LRRC28-220ENST00000561253 PTPRAP18433 802 aa8.5□□□□□ -1.05
LRRC28-220ENST00000561253 GRIA4P48058 902 aa8.5□□□□□ -1.05
LRRC28-220ENST00000561253 NBPF8Q3BBV2 869 aa8.5□□□□□ -1.05
LRRC28-220ENST00000561253 GDF6Q6KF10 455 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-220ENST00000561253 XRN1Q8IZH2 1706 aaKnown RBP8.5□□□□□ -1.05
LRRC28-220ENST00000561253 BSNDQ8WZ55 320 aa8.5□□□□□ -1.05
LRRC28-220ENST00000561253 BTBD6Q96KE9 485 aa8.5□□□□□ -1.05
LRRC28-220ENST00000561253 LACRTQ9GZZ8 138 aa8.5□□□□□ -1.05
LRRC28-220ENST00000561253 TRIM33Q9UPN9 1127 aa8.5□□□□□ -1.05
LRRC28-220ENST00000561253 AKAP2Q9Y2D5 859 aa8.5□□□□□ -1.05
LRRC28-220ENST00000561253 STARD13Q9Y3M8 1113 aa8.5□□□□□ -1.05
LRRC28-220ENST00000561253 GPRASP1Q5JY77 1395 aa8.49□□□□□ -1.05
LRRC28-220ENST00000561253 SHISA8B8ZZ34 492 aa8.49□□□□□ -1.05
LRRC28-220ENST00000561253 M0R082 166 aa8.49□□□□□ -1.05
LRRC28-220ENST00000561253 LILRB5O75023 590 aa8.49□□□□□ -1.05
LRRC28-220ENST00000561253 CTSHP09668 335 aa8.49□□□□□ -1.05
LRRC28-220ENST00000561253 SPRED3Q2MJR0 410 aa8.49□□□□□ -1.05
LRRC28-220ENST00000561253 ZNF417Q8TAU3 575 aa8.49□□□□□ -1.05
LRRC28-220ENST00000561253 ZNF587Q96SQ5 575 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-220ENST00000561253 NKTRP30414 1462 aaKnown RBP8.49□□□□□ -1.05
LRRC28-220ENST00000561253 LRRC7Q96NW7 1537 aa8.49□□□□□ -1.05
LRRC28-220ENST00000561253 LRPPRCP42704 1394 aaKnown RBP8.48□□□□□ -1.05
LRRC28-220ENST00000561253 ABCC11Q96J66 1382 aa8.48□□□□□ -1.05
LRRC28-220ENST00000561253 PTCH1Q13635 1447 aa8.48□□□□□ -1.05
LRRC28-220ENST00000561253 CHD2O14647 1828 aaKnown RBP8.48□□□□□ -1.05
LRRC28-220ENST00000561253 PTPN12Q05209 780 aaKnown RBP8.48□□□□□ -1.05
LRRC28-220ENST00000561253 C20orf204Q6ZNR8 217 aa8.48□□□□□ -1.05
LRRC28-220ENST00000561253 CACTIN-AS1Q8N1I8 211 aa8.48□□□□□ -1.05
LRRC28-220ENST00000561253 SVOPQ8N4V2 548 aa8.48□□□□□ -1.05
LRRC28-220ENST00000561253 ENAMQ9NRM1 1142 aa8.48□□□□□ -1.05
LRRC28-220ENST00000561253 TTF2Q9UNY4 1162 aaKnown RBP8.48□□□□□ -1.05
LRRC28-220ENST00000561253 CPS1P31327 1500 aa8.48□□□□□ -1.05
LRRC28-220ENST00000561253 TONSLQ96HA7 1378 aa8.48□□□□□ -1.05
LRRC28-220ENST00000561253 ROBO2Q9HCK4 1378 aa8.48□□□□□ -1.05
LRRC28-220ENST00000561253 SCAMP3O14828 347 aaKnown RBP8.47□□□□□ -1.05
LRRC28-220ENST00000561253 TCF3P15923 654 aa8.47□□□□□ -1.05
LRRC28-220ENST00000561253 ITPKAP23677 461 aa8.47□□□□□ -1.05
LRRC28-220ENST00000561253 CDC27P30260 824 aa8.47□□□□□ -1.05
LRRC28-220ENST00000561253 CABP4P57796 275 aa8.47□□□□□ -1.05
LRRC28-220ENST00000561253 TAF1CQ15572 869 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-220ENST00000561253 MEI1Q5TIA1 1274 aa8.47□□□□□ -1.05
LRRC28-220ENST00000561253 TMEM132EQ6IEE7 984 aa8.47□□□□□ -1.05
LRRC28-220ENST00000561253 C3orf58Q8NDZ4 430 aa8.47□□□□□ -1.05
LRRC28-220ENST00000561253 NEDD1Q8NHV4 660 aa8.47□□□□□ -1.05
LRRC28-220ENST00000561253 WHAMMQ8TF30 809 aa8.47□□□□□ -1.05
LRRC28-220ENST00000561253 ADAM19Q9H013 955 aa8.47□□□□□ -1.05
LRRC28-220ENST00000561253 PPM1HQ9ULR3 514 aa8.47□□□□□ -1.05
LRRC28-220ENST00000561253 LAMC1P11047 1609 aa8.47□□□□□ -1.05
LRRC28-220ENST00000561253 YTHDC2Q9H6S0 1430 aaKnown RBP8.46□□□□□ -1.05
LRRC28-220ENST00000561253 KIAA1210Q9ULL0 1709 aa8.46□□□□□ -1.05
LRRC28-220ENST00000561253 RALGAPBQ86X10 1494 aa8.46□□□□□ -1.05
LRRC28-220ENST00000561253 LDLRAD1Q5T700 205 aa8.46□□□□□ -1.06
LRRC28-220ENST00000561253 MUC3BQ9H195 1237 aa8.46□□□□□ -1.06
LRRC28-220ENST00000561253 ZNF576Q9H609 170 aa8.46□□□□□ -1.06
LRRC28-220ENST00000561253 USP31Q70CQ4 1352 aa8.46□□□□□ -1.06
LRRC28-220ENST00000561253 DLC1Q96QB1 1528 aa8.45□□□□□ -1.06
LRRC28-220ENST00000561253 ST13P50502 369 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms