RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 FBXO18Q8NFZ0 1043 aa29.31■■■□□ 2.28
SHF-208ENST00000560734 NKX2-3Q8TAU0 364 aa29.31■■■□□ 2.28
SHF-208ENST00000560734 GGA1Q9UJY5 639 aa29.31■■■□□ 2.28
SHF-208ENST00000560734 SLC12A7Q9Y666 1083 aa29.31■■■□□ 2.28
SHF-208ENST00000560734 CCDC69A6NI79 296 aa29.3■■■□□ 2.28
SHF-208ENST00000560734 NASPP49321 788 aaPredicted RBP29.3■■■□□ 2.28
SHF-208ENST00000560734 CHAF1AQ13111 956 aaPredicted RBP29.3■■■□□ 2.28
SHF-208ENST00000560734 PPP2R5BQ15173 497 aa29.3■■■□□ 2.28
SHF-208ENST00000560734 SBK1Q52WX2 424 aa29.3■■■□□ 2.28
SHF-208ENST00000560734 NFXL1Q6ZNB6 911 aa29.3■■■□□ 2.28
SHF-208ENST00000560734 C8orf76Q96K31 380 aa29.3■■■□□ 2.28
SHF-208ENST00000560734 STK36Q9NRP7 1315 aa29.3■■■□□ 2.28
SHF-208ENST00000560734 MYH15Q9Y2K3 1946 aa29.29■■■□□ 2.28
SHF-208ENST00000560734 IL1R1P14778 569 aa29.29■■■□□ 2.28
SHF-208ENST00000560734 ADD1P35611 737 aaKnown RBP29.29■■■□□ 2.28
SHF-208ENST00000560734 DYNLL1P63167 89 aaKnown RBP29.29■■■□□ 2.28
SHF-208ENST00000560734 APBA3O96018 575 aa29.28■■■□□ 2.28
SHF-208ENST00000560734 LDHBP07195 334 aaKnown RBP29.28■■■□□ 2.28
SHF-208ENST00000560734 PRDX5P30044 214 aa29.28■■■□□ 2.28
SHF-208ENST00000560734 FAM173BQ6P4H8 233 aa29.28■■■□□ 2.28
SHF-208ENST00000560734 RCOR1Q9UKL0 485 aa29.28■■■□□ 2.28
SHF-208ENST00000560734 WTAPQ15007 396 aa29.28■■■□□ 2.28
SHF-208ENST00000560734 ZNF827Q17R98 1081 aa29.28■■■□□ 2.28
SHF-208ENST00000560734 BRAPQ7Z569 592 aa29.28■■■□□ 2.28
SHF-208ENST00000560734 DZIP1Q86YF9 867 aaKnown RBP29.28■■■□□ 2.28
SHF-208ENST00000560734 SP8Q8IXZ3 490 aa29.28■■■□□ 2.28
SHF-208ENST00000560734 ARPP21Q9UBL0 812 aaPredicted RBP29.28■■■□□ 2.28
SHF-208ENST00000560734 LDHCP07864 332 aa29.27■■■□□ 2.28
SHF-208ENST00000560734 CTR9Q6PD62 1173 aa29.27■■■□□ 2.28
SHF-208ENST00000560734 TSPY26PQ9H489 355 aa29.27■■■□□ 2.28
SHF-208ENST00000560734 INCENPQ9NQS7 918 aa29.27■■■□□ 2.28
SHF-208ENST00000560734 CCDC196A0A1B0GTZ2 297 aa29.26■■■□□ 2.27
SHF-208ENST00000560734 GOLGA8AA7E2F4 631 aa29.26■■■□□ 2.27
SHF-208ENST00000560734 ORC4O43929 436 aa29.26■■■□□ 2.27
SHF-208ENST00000560734 PPP4CP60510 307 aa29.26■■■□□ 2.27
SHF-208ENST00000560734 NTRK3Q16288 839 aa29.26■■■□□ 2.27
SHF-208ENST00000560734 ANP32BQ92688 251 aaKnown RBP29.26■■■□□ 2.27
SHF-208ENST00000560734 LTBP1Q14766 1721 aa29.26■■■□□ 2.27
SHF-208ENST00000560734 GOLGA6L4A6NEF3 574 aa29.25■■■□□ 2.27
SHF-208ENST00000560734 MINDY4BA8MYZ0 360 aa29.25■■■□□ 2.27
SHF-208ENST00000560734 UFL1O94874 794 aa29.25■■■□□ 2.27
SHF-208ENST00000560734 SLC3A2P08195 630 aaKnown RBP29.25■■■□□ 2.27
SHF-208ENST00000560734 COL23A1Q86Y22 540 aaPredicted RBP29.25■■■□□ 2.27
SHF-208ENST00000560734 UBAC1Q9BSL1 405 aa29.25■■■□□ 2.27
SHF-208ENST00000560734 CD209Q9NNX6 404 aa29.25■■■□□ 2.27
SHF-208ENST00000560734 DCP1AQ9NPI6 582 aaPredicted RBP29.25■■■□□ 2.27
SHF-208ENST00000560734 TFIP11Q9UBB9 837 aaKnown RBP29.25■■■□□ 2.27
SHF-208ENST00000560734 CCDC173Q0VFZ6 552 aa29.25■■■□□ 2.27
SHF-208ENST00000560734 RBSNQ9H1K0 784 aa29.25■■■□□ 2.27
SHF-208ENST00000560734 FAM217BQ9NTX9 383 aaPredicted RBP29.25■■■□□ 2.27
SHF-208ENST00000560734 IFNAR1P17181 557 aa29.24■■■□□ 2.27
SHF-208ENST00000560734 WASF1Q92558 559 aa29.24■■■□□ 2.27
SHF-208ENST00000560734 PPP1R9BQ96SB3 815 aa29.24■■■□□ 2.27
SHF-208ENST00000560734 SENP2Q9HC62 589 aa29.24■■■□□ 2.27
SHF-208ENST00000560734 TOMM22Q9NS69 142 aa29.24■■■□□ 2.27
SHF-208ENST00000560734 AATFQ9NY61 560 aaKnown RBP eCLIP29.24■■■□□ 2.27
SHF-208ENST00000560734 BAG3O95817 575 aa29.23■■■□□ 2.27
SHF-208ENST00000560734 CDC27P30260 824 aa29.23■■■□□ 2.27
SHF-208ENST00000560734 SEC23AQ15436 765 aa29.23■■■□□ 2.27
SHF-208ENST00000560734 RRP12Q5JTH9 1297 aaKnown RBP29.23■■■□□ 2.27
SHF-208ENST00000560734 MICU3Q86XE3 530 aa29.23■■■□□ 2.27
SHF-208ENST00000560734 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.23■■■□□ 2.27
SHF-208ENST00000560734 LAMB1P07942 1786 aa29.23■■■□□ 2.27
SHF-208ENST00000560734 NPR1P16066 1061 aa29.23■■■□□ 2.27
SHF-208ENST00000560734 IARSP41252 1262 aaKnown RBP29.23■■■□□ 2.27
SHF-208ENST00000560734 TBC1D16Q8TBP0 767 aa29.23■■■□□ 2.27
SHF-208ENST00000560734 TBC1D22AQ8WUA7 517 aa29.23■■■□□ 2.27
SHF-208ENST00000560734 ATP6V0A2Q9Y487 856 aa29.23■■■□□ 2.27
SHF-208ENST00000560734 ANKRD31Q8N7Z5 1873 aa29.22■■■□□ 2.27
SHF-208ENST00000560734 DDX19AQ9NUU7 478 aaKnown RBP29.22■■■□□ 2.27
SHF-208ENST00000560734 USP17L12C9JPN9 530 aa29.21■■■□□ 2.27
SHF-208ENST00000560734 USP17L21D6R901 530 aa29.21■■■□□ 2.27
SHF-208ENST00000560734 PDE6BP35913 854 aa29.21■■■□□ 2.27
SHF-208ENST00000560734 RTEL1Q9NZ71 1219 aa29.21■■■□□ 2.27
SHF-208ENST00000560734 PPEF1O14829 653 aaPredicted RBP29.2■■■□□ 2.27
SHF-208ENST00000560734 FMNL1O95466 1100 aaPredicted RBP29.2■■■□□ 2.27
SHF-208ENST00000560734 ALDH1B1P30837 517 aa29.2■■■□□ 2.27
SHF-208ENST00000560734 IQCA1Q86XH1 822 aa29.2■■■□□ 2.27
SHF-208ENST00000560734 ZSCAN10Q96SZ4 725 aaPredicted RBP29.2■■■□□ 2.27
SHF-208ENST00000560734 TNS1Q9HBL0 1735 aaKnown RBP29.2■■■□□ 2.27
SHF-208ENST00000560734 SRGNP10124 158 aa29.2■■■□□ 2.26
SHF-208ENST00000560734 ALG1Q9BT22 464 aa29.2■■■□□ 2.26
SHF-208ENST00000560734 RTN4Q9NQC3 1192 aaKnown RBP29.2■■■□□ 2.26
SHF-208ENST00000560734 MKRN1Q9UHC7 482 aaKnown RBP29.2■■■□□ 2.26
SHF-208ENST00000560734 FAM205AQ6ZU69 1335 aa29.19■■■□□ 2.26
SHF-208ENST00000560734 SSRP1Q08945 709 aaKnown RBP29.19■■■□□ 2.26
SHF-208ENST00000560734 RTN1Q16799 776 aa29.19■■■□□ 2.26
SHF-208ENST00000560734 SLF2Q8IX21 1173 aa29.19■■■□□ 2.26
SHF-208ENST00000560734 FAM163AQ96GL9 167 aaPredicted RBP29.19■■■□□ 2.26
SHF-208ENST00000560734 PGBD1Q96JS3 809 aa29.19■■■□□ 2.26
SHF-208ENST00000560734 NOL10Q9BSC4 688 aaKnown RBP29.19■■■□□ 2.26
SHF-208ENST00000560734 DLEC1Q9Y238 1755 aa29.18■■■□□ 2.26
SHF-208ENST00000560734 TNKSO95271 1327 aa29.18■■■□□ 2.26
SHF-208ENST00000560734 CALM1P0DP23 149 aa29.18■■■□□ 2.26
SHF-208ENST00000560734 CALM2P0DP24 149 aa29.18■■■□□ 2.26
SHF-208ENST00000560734 CALM3P0DP25 149 aa29.18■■■□□ 2.26
SHF-208ENST00000560734 ZNF654Q8IZM8 581 aa29.18■■■□□ 2.26
SHF-208ENST00000560734 POLR3EQ9NVU0 708 aa29.18■■■□□ 2.26
SHF-208ENST00000560734 POLLQ9UGP5 575 aa29.18■■■□□ 2.26
SHF-208ENST00000560734 BAZ2AQ9UIF9 1905 aaKnown RBP29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms