RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 FOCADQ5VW36 1801 aa19.9■□□□□ 0.78
SPG21-211ENST00000560564 PTPRFP10586 1907 aa19.9■□□□□ 0.78
SPG21-211ENST00000560564 PDE4DIPQ5VU43 2346 aa19.9■□□□□ 0.78
SPG21-211ENST00000560564 NPM3O75607 178 aaKnown RBP19.9■□□□□ 0.78
SPG21-211ENST00000560564 NOL9Q5SY16 702 aaKnown RBP19.9■□□□□ 0.78
SPG21-211ENST00000560564 OTUD7BQ6GQQ9 843 aa19.9■□□□□ 0.78
SPG21-211ENST00000560564 FAM43AQ8N2R8 423 aa19.9■□□□□ 0.78
SPG21-211ENST00000560564 RCAN3Q9UKA8 241 aa19.9■□□□□ 0.78
SPG21-211ENST00000560564 PHIPQ8WWQ0 1821 aa19.9■□□□□ 0.78
SPG21-211ENST00000560564 DDTLA6NHG4 134 aaPredicted RBP19.89■□□□□ 0.77
SPG21-211ENST00000560564 PHF20L1A8MW92 1017 aa19.89■□□□□ 0.77
SPG21-211ENST00000560564 SIPA1L1O43166 1804 aa19.89■□□□□ 0.77
SPG21-211ENST00000560564 CYP2E1P05181 493 aaPredicted RBP19.89■□□□□ 0.77
SPG21-211ENST00000560564 DOCK1Q14185 1865 aa19.89■□□□□ 0.77
SPG21-211ENST00000560564 PKN2Q16513 984 aaKnown RBP19.89■□□□□ 0.77
SPG21-211ENST00000560564 CCDC158Q5M9N0 1113 aa19.89■□□□□ 0.77
SPG21-211ENST00000560564 TTC39AQ5SRH9 613 aa19.89■□□□□ 0.77
SPG21-211ENST00000560564 SNRKQ9NRH2 765 aa19.89■□□□□ 0.77
SPG21-211ENST00000560564 ZBTB40Q9NUA8 1239 aa19.89■□□□□ 0.77
SPG21-211ENST00000560564 RAI14Q9P0K7 980 aa19.89■□□□□ 0.77
SPG21-211ENST00000560564 EXOC6BQ9Y2D4 811 aa19.89■□□□□ 0.77
SPG21-211ENST00000560564 COG6Q9Y2V7 657 aa19.89■□□□□ 0.77
SPG21-211ENST00000560564 COL2A1P02458 1487 aaPredicted RBP19.88■□□□□ 0.77
SPG21-211ENST00000560564 SLURP2P0DP57 97 aa19.88■□□□□ 0.77
SPG21-211ENST00000560564 CAP1Q01518 475 aa19.88■□□□□ 0.77
SPG21-211ENST00000560564 PPATQ06203 517 aa19.88■□□□□ 0.77
SPG21-211ENST00000560564 SIRT2Q8IXJ6 389 aa19.88■□□□□ 0.77
SPG21-211ENST00000560564 DDX19BQ9UMR2 479 aa19.88■□□□□ 0.77
SPG21-211ENST00000560564 HPS5Q9UPZ3 1129 aa19.88■□□□□ 0.77
SPG21-211ENST00000560564 KIAA0100Q14667 2235 aaKnown RBP19.88■□□□□ 0.77
SPG21-211ENST00000560564 MAP4K4O95819 1239 aaPredicted RBP19.87■□□□□ 0.77
SPG21-211ENST00000560564 LDHCP07864 332 aa19.87■□□□□ 0.77
SPG21-211ENST00000560564 GSTO1P78417 241 aa19.87■□□□□ 0.77
SPG21-211ENST00000560564 CCDC8Q9H0W5 538 aaPredicted RBP19.87■□□□□ 0.77
SPG21-211ENST00000560564 KCNH4Q9UQ05 1017 aa19.87■□□□□ 0.77
SPG21-211ENST00000560564 TNRC18O15417 2968 aaPredicted RBP19.87■□□□□ 0.77
SPG21-211ENST00000560564 CETPP11597 493 aa19.86■□□□□ 0.77
SPG21-211ENST00000560564 SNAPC2Q13487 334 aa19.86■□□□□ 0.77
SPG21-211ENST00000560564 PICALMQ13492 652 aa19.86■□□□□ 0.77
SPG21-211ENST00000560564 FBXO46Q6PJ61 603 aaPredicted RBP19.86■□□□□ 0.77
SPG21-211ENST00000560564 ZCCHC17Q9NP64 241 aaKnown RBP19.86■□□□□ 0.77
SPG21-211ENST00000560564 LRP2BPQ9P2M1 347 aa19.86■□□□□ 0.77
SPG21-211ENST00000560564 BTBD19C9JJ37 291 aa19.85■□□□□ 0.77
SPG21-211ENST00000560564 ZAP70P43403 619 aa19.85■□□□□ 0.77
SPG21-211ENST00000560564 MOGSQ13724 837 aa19.85■□□□□ 0.77
SPG21-211ENST00000560564 TAF1CQ15572 869 aaPredicted RBP19.85■□□□□ 0.77
SPG21-211ENST00000560564 OTOP1Q7RTM1 612 aa19.85■□□□□ 0.77
SPG21-211ENST00000560564 ADGRA1Q86SQ6 560 aa19.85■□□□□ 0.77
SPG21-211ENST00000560564 ERC1Q8IUD2 1116 aa19.85■□□□□ 0.77
SPG21-211ENST00000560564 RPAP2Q8IXW5 612 aaPredicted RBP19.85■□□□□ 0.77
SPG21-211ENST00000560564 PIH1D3Q9NQM4 214 aaKnown RBP19.85■□□□□ 0.77
SPG21-211ENST00000560564 ZSWIM8A7E2V4 1837 aa19.84■□□□□ 0.77
SPG21-211ENST00000560564 ATAD5Q96QE3 1844 aa19.84■□□□□ 0.77
SPG21-211ENST00000560564 IGSF3O75054 1194 aa19.84■□□□□ 0.77
SPG21-211ENST00000560564 PPP4CP60510 307 aa19.84■□□□□ 0.77
SPG21-211ENST00000560564 C20orf194Q5TEA3 1177 aa19.84■□□□□ 0.77
SPG21-211ENST00000560564 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.84■□□□□ 0.77
SPG21-211ENST00000560564 MKI67P46013 3256 aaKnown RBP19.83■□□□□ 0.77
SPG21-211ENST00000560564 TBC1D12O60347 775 aa19.83■□□□□ 0.77
SPG21-211ENST00000560564 SP3Q02447 781 aa19.83■□□□□ 0.77
SPG21-211ENST00000560564 NAA16Q6N069 864 aaPredicted RBP19.83■□□□□ 0.77
SPG21-211ENST00000560564 ZSCAN29Q8IWY8 852 aaPredicted RBP19.83■□□□□ 0.77
SPG21-211ENST00000560564 SCYL3Q8IZE3 742 aa19.83■□□□□ 0.77
SPG21-211ENST00000560564 RHPN1Q8TCX5 695 aa19.83■□□□□ 0.77
SPG21-211ENST00000560564 CD99L2Q8TCZ2 262 aa19.83■□□□□ 0.77
SPG21-211ENST00000560564 SH3RF3Q8TEJ3 882 aaPredicted RBP19.83■□□□□ 0.77
SPG21-211ENST00000560564 ERO1AQ96HE7 468 aa19.83■□□□□ 0.77
SPG21-211ENST00000560564 OSBPL5Q9H0X9 879 aaPredicted RBP19.83■□□□□ 0.77
SPG21-211ENST00000560564 ZFYVE28Q9HCC9 887 aa19.83■□□□□ 0.77
SPG21-211ENST00000560564 AACSQ86V21 672 aa19.82■□□□□ 0.76
SPG21-211ENST00000560564 TEX11Q8IYF3 940 aa19.82■□□□□ 0.76
SPG21-211ENST00000560564 IL1RAPL2Q9NP60 686 aa19.82■□□□□ 0.76
SPG21-211ENST00000560564 TRIM17Q9Y577 477 aa19.82■□□□□ 0.76
SPG21-211ENST00000560564 TLR2O60603 784 aa19.81■□□□□ 0.76
SPG21-211ENST00000560564 PDE3AQ14432 1141 aa19.81■□□□□ 0.76
SPG21-211ENST00000560564 HSP90AB4PQ58FF6 505 aa19.81■□□□□ 0.76
SPG21-211ENST00000560564 AATFQ9NY61 560 aaKnown RBP eCLIP19.81■□□□□ 0.762e-6■■■□□ 17.4
SPG21-211ENST00000560564 NDUFB9Q9Y6M9 179 aa19.81■□□□□ 0.76
SPG21-211ENST00000560564 ADGRA2Q96PE1 1338 aa19.8■□□□□ 0.76
SPG21-211ENST00000560564 CXCL11O14625 94 aa19.8■□□□□ 0.76
SPG21-211ENST00000560564 CTNND1O60716 968 aaKnown RBP19.8■□□□□ 0.76
SPG21-211ENST00000560564 PTPRAP18433 802 aa19.8■□□□□ 0.76
SPG21-211ENST00000560564 SOX10P56693 466 aa19.8■□□□□ 0.76
SPG21-211ENST00000560564 ANKRD23Q86SG2 305 aa19.8■□□□□ 0.76
SPG21-211ENST00000560564 ANTXR1Q9H6X2 564 aa19.8■□□□□ 0.76
SPG21-211ENST00000560564 MYH1P12882 1939 aa19.79■□□□□ 0.76
SPG21-211ENST00000560564 FAM196BA6NMK8 535 aa19.79■□□□□ 0.76
SPG21-211ENST00000560564 HMMRO75330 724 aa19.79■□□□□ 0.76
SPG21-211ENST00000560564 MLLT1Q03111 559 aaPredicted RBP19.79■□□□□ 0.76
SPG21-211ENST00000560564 KIF1BPQ96EK5 621 aa19.79■□□□□ 0.76
SPG21-211ENST00000560564 AFG3L2Q9Y4W6 797 aa19.79■□□□□ 0.76
SPG21-211ENST00000560564 A0A0G2JLL6 359 aaPredicted RBP19.78■□□□□ 0.76
SPG21-211ENST00000560564 BAG3O95817 575 aa19.78■□□□□ 0.76
SPG21-211ENST00000560564 RRP1BQ14684 758 aaKnown RBP19.78■□□□□ 0.76
SPG21-211ENST00000560564 GPAT2Q6NUI2 795 aa19.78■□□□□ 0.76
SPG21-211ENST00000560564 PRRT2Q7Z6L0 340 aaPredicted RBP19.78■□□□□ 0.76
SPG21-211ENST00000560564 EFCC1Q9HA90 598 aa19.78■□□□□ 0.76
SPG21-211ENST00000560564 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.78■□□□□ 0.76
SPG21-211ENST00000560564 PTPN22Q9Y2R2 807 aa19.78■□□□□ 0.76
SPG21-211ENST00000560564 ZHX2Q9Y6X8 837 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms