RNA–Protein interactions for RNA: ENST00000560356.5

CPNE6-215, Transcript of copine 6, human

TSL 4

Gene CPNE6, Length 733 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE6-215	ENST00000560356	SRCIN1	Q9C0H9	1055 aa		18.95	■□□□□ 0.62
CPNE6-215	ENST00000560356	CRISPLD2	Q9H0B8	497 aa		18.95	■□□□□ 0.62
CPNE6-215	ENST00000560356	TAOK2	Q9UL54	1235 aa		18.95	■□□□□ 0.62
CPNE6-215	ENST00000560356	DAGLA	Q9Y4D2	1042 aa		18.95	■□□□□ 0.62
CPNE6-215	ENST00000560356	KIF16B	Q96L93	1317 aa		18.95	■□□□□ 0.62
CPNE6-215	ENST00000560356	LOC285556	D6RIA3	1793 aa		18.94	■□□□□ 0.62
CPNE6-215	ENST00000560356	BMP8B	P34820	402 aa		18.94	■□□□□ 0.62
CPNE6-215	ENST00000560356	GADL1	Q6ZQY3	521 aa		18.94	■□□□□ 0.62
CPNE6-215	ENST00000560356		Q7L0L9	218 aa		18.94	■□□□□ 0.62
CPNE6-215	ENST00000560356	FASTKD5	Q7L8L6	764 aa	Known RBP	18.94	■□□□□ 0.62
CPNE6-215	ENST00000560356	BICC1	Q9H694	974 aa	Known RBP	18.94	■□□□□ 0.62
CPNE6-215	ENST00000560356	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	18.94	■□□□□ 0.62
CPNE6-215	ENST00000560356	ATRNL1	Q5VV63	1379 aa		18.93	■□□□□ 0.62
CPNE6-215	ENST00000560356	ATAD5	Q96QE3	1844 aa		18.93	■□□□□ 0.62
CPNE6-215	ENST00000560356	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.93	■□□□□ 0.62
CPNE6-215	ENST00000560356	DIXDC1	Q155Q3	683 aa		18.93	■□□□□ 0.62
CPNE6-215	ENST00000560356	SCYL3	Q8IZE3	742 aa		18.93	■□□□□ 0.62
CPNE6-215	ENST00000560356	SMCR8	Q8TEV9	937 aa	Predicted RBP	18.93	■□□□□ 0.62
CPNE6-215	ENST00000560356	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	18.93	■□□□□ 0.62
CPNE6-215	ENST00000560356	SPINK5	Q9NQ38	1064 aa	Predicted RBP	18.93	■□□□□ 0.62
CPNE6-215	ENST00000560356	FAM198A	Q9UFP1	575 aa		18.93	■□□□□ 0.62
CPNE6-215	ENST00000560356	ZHX2	Q9Y6X8	837 aa		18.93	■□□□□ 0.62
CPNE6-215	ENST00000560356	PUM3	Q15397	648 aa	Known RBP	18.92	■□□□□ 0.62
CPNE6-215	ENST00000560356	RABL6	Q3YEC7	729 aa	Predicted RBP	18.92	■□□□□ 0.62
CPNE6-215	ENST00000560356	FAM9B	Q8IZU0	186 aa		18.92	■□□□□ 0.62
CPNE6-215	ENST00000560356	WDR66	Q8TBY9	1149 aa		18.92	■□□□□ 0.62
CPNE6-215	ENST00000560356	PICK1	Q9NRD5	415 aa		18.92	■□□□□ 0.62
CPNE6-215	ENST00000560356	STXBP5L	Q9Y2K9	1186 aa		18.92	■□□□□ 0.62
CPNE6-215	ENST00000560356	SLC45A1	Q9Y2W3	748 aa		18.92	■□□□□ 0.62
CPNE6-215	ENST00000560356	PLXNB2	O15031	1838 aa		18.91	■□□□□ 0.62
CPNE6-215	ENST00000560356	IFIT1	P09914	478 aa	Known RBP	18.91	■□□□□ 0.62
CPNE6-215	ENST00000560356	KLHDC4	Q8TBB5	520 aa		18.91	■□□□□ 0.62
CPNE6-215	ENST00000560356	AFG3L2	Q9Y4W6	797 aa		18.91	■□□□□ 0.62
CPNE6-215	ENST00000560356	UTY	O14607	1347 aa		18.91	■□□□□ 0.62
CPNE6-215	ENST00000560356	PHF20L1	A8MW92	1017 aa		18.9	■□□□□ 0.62
CPNE6-215	ENST00000560356	PTPRA	P18433	802 aa		18.9	■□□□□ 0.62
CPNE6-215	ENST00000560356	FGFR2	P21802	821 aa		18.9	■□□□□ 0.62
CPNE6-215	ENST00000560356	ZFPM1	Q8IX07	1006 aa		18.9	■□□□□ 0.62
CPNE6-215	ENST00000560356	ANKRD44	Q8N8A2	993 aa		18.9	■□□□□ 0.62
CPNE6-215	ENST00000560356	COA7	Q96BR5	231 aa		18.9	■□□□□ 0.62
CPNE6-215	ENST00000560356	SYN1	P17600	705 aa		18.89	■□□□□ 0.61
CPNE6-215	ENST00000560356	PRDX5	P30044	214 aa		18.89	■□□□□ 0.61
CPNE6-215	ENST00000560356	LRIT3	Q3SXY7	679 aa		18.89	■□□□□ 0.61
CPNE6-215	ENST00000560356	ANKRD13C	Q8N6S4	541 aa		18.89	■□□□□ 0.61
CPNE6-215	ENST00000560356	ANKLE1	Q8NAG6	615 aa		18.89	■□□□□ 0.61
CPNE6-215	ENST00000560356	USP40	Q9NVE5	1235 aa		18.89	■□□□□ 0.61
CPNE6-215	ENST00000560356	SLC5A1	P13866	664 aa		18.88	■□□□□ 0.61
CPNE6-215	ENST00000560356	MAGEA10	P43363	369 aa	Predicted RBP	18.88	■□□□□ 0.61
CPNE6-215	ENST00000560356	TDH	Q8IZJ6	230 aa		18.88	■□□□□ 0.61
CPNE6-215	ENST00000560356	MTMR10	Q9NXD2	777 aa		18.88	■□□□□ 0.61
CPNE6-215	ENST00000560356	RFX7	Q2KHR2	1363 aa		18.88	■□□□□ 0.61
CPNE6-215	ENST00000560356	TRIM75P	A6NK02	468 aa		18.87	■□□□□ 0.61
CPNE6-215	ENST00000560356	CCER2	I3L3R5	266 aa		18.87	■□□□□ 0.61
CPNE6-215	ENST00000560356	HMGCR	P04035	888 aa		18.87	■□□□□ 0.61
CPNE6-215	ENST00000560356	RGS3	P49796	1198 aa		18.87	■□□□□ 0.61
CPNE6-215	ENST00000560356	NBPF3	Q9H094	633 aa		18.87	■□□□□ 0.61
CPNE6-215	ENST00000560356	AGTPBP1	Q9UPW5	1226 aa		18.87	■□□□□ 0.61
CPNE6-215	ENST00000560356	FRMPD3	Q5JV73	1810 aa		18.86	■□□□□ 0.61
CPNE6-215	ENST00000560356	LDHB	P07195	334 aa	Known RBP	18.86	■□□□□ 0.61
CPNE6-215	ENST00000560356	FAM110C	Q1W6H9	321 aa		18.86	■□□□□ 0.61
CPNE6-215	ENST00000560356	COL25A1	Q9BXS0	654 aa	Predicted RBP	18.86	■□□□□ 0.61
CPNE6-215	ENST00000560356	C11orf49	Q9H6J7	331 aa		18.86	■□□□□ 0.61
CPNE6-215	ENST00000560356	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	18.86	■□□□□ 0.61
CPNE6-215	ENST00000560356	PNMA3	Q9UL41	463 aa		18.86	■□□□□ 0.61
CPNE6-215	ENST00000560356	LRRFIP2	Q9Y608	721 aa	Known RBP	18.86	■□□□□ 0.61
CPNE6-215	ENST00000560356	TREML2	Q5T2D2	321 aa		18.85	■□□□□ 0.61
CPNE6-215	ENST00000560356	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	18.85	■□□□□ 0.61
CPNE6-215	ENST00000560356	LPIN2	Q92539	896 aa		18.85	■□□□□ 0.61
CPNE6-215	ENST00000560356	RPTOR	Q8N122	1335 aa		18.84	■□□□□ 0.61
CPNE6-215	ENST00000560356	ENTPD3	O75355	529 aa		18.84	■□□□□ 0.61
CPNE6-215	ENST00000560356	SLURP2	P0DP57	97 aa		18.84	■□□□□ 0.61
CPNE6-215	ENST00000560356	SH3BP5L	Q7L8J4	393 aa		18.84	■□□□□ 0.61
CPNE6-215	ENST00000560356	CCDC84	Q86UT8	332 aa	Predicted RBP	18.84	■□□□□ 0.61
CPNE6-215	ENST00000560356	IDI2	Q9BXS1	227 aa		18.84	■□□□□ 0.61
CPNE6-215	ENST00000560356	UBE2O	Q9C0C9	1292 aa	Known RBP	18.84	■□□□□ 0.61
CPNE6-215	ENST00000560356	HMX1	Q9NP08	348 aa	Predicted RBP	18.84	■□□□□ 0.61
CPNE6-215	ENST00000560356	CTNND1	O60716	968 aa	Known RBP	18.83	■□□□□ 0.6
CPNE6-215	ENST00000560356	TRIM32	Q13049	653 aa		18.83	■□□□□ 0.6
CPNE6-215	ENST00000560356	MAST2	Q6P0Q8	1798 aa		18.83	■□□□□ 0.6
CPNE6-215	ENST00000560356	SALL1	Q9NSC2	1324 aa		18.82	■□□□□ 0.6
CPNE6-215	ENST00000560356	EYA2	O00167	538 aa		18.82	■□□□□ 0.6
CPNE6-215	ENST00000560356	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
CPNE6-215	ENST00000560356	VCAN	P13611	3396 aa		18.82	■□□□□ 0.6
CPNE6-215	ENST00000560356	LAMA2	P24043	3122 aa	Known RBP	18.81	■□□□□ 0.6
CPNE6-215	ENST00000560356	GAK	O14976	1311 aa		18.81	■□□□□ 0.6
CPNE6-215	ENST00000560356	PFAS	O15067	1338 aa		18.81	■□□□□ 0.6
CPNE6-215	ENST00000560356	DDTL	A6NHG4	134 aa	Predicted RBP	18.81	■□□□□ 0.6
CPNE6-215	ENST00000560356	MAP3K10	Q02779	954 aa		18.81	■□□□□ 0.6
CPNE6-215	ENST00000560356	PROCA1	Q8NCQ7	364 aa	Predicted RBP	18.81	■□□□□ 0.6
CPNE6-215	ENST00000560356	OGDHL	Q9ULD0	1010 aa		18.81	■□□□□ 0.6
CPNE6-215	ENST00000560356	GCLC	P48506	637 aa	Predicted RBP	18.8	■□□□□ 0.6
CPNE6-215	ENST00000560356	PICALM	Q13492	652 aa		18.8	■□□□□ 0.6
CPNE6-215	ENST00000560356	DIEXF	Q68CQ4	756 aa	Known RBP	18.8	■□□□□ 0.6
CPNE6-215	ENST00000560356	TRIB2	Q92519	343 aa		18.8	■□□□□ 0.6
CPNE6-215	ENST00000560356	DDX4	Q9NQI0	724 aa	Known RBP	18.8	■□□□□ 0.6
CPNE6-215	ENST00000560356	GNL3L	Q9NVN8	582 aa	Known RBP	18.8	■□□□□ 0.6
CPNE6-215	ENST00000560356	COL2A1	P02458	1487 aa	Predicted RBP	18.79	■□□□□ 0.6
CPNE6-215	ENST00000560356	RFX5	P48382	616 aa	Predicted RBP	18.79	■□□□□ 0.6
CPNE6-215	ENST00000560356	ATP2B3	Q16720	1220 aa		18.79	■□□□□ 0.6
CPNE6-215	ENST00000560356	GJD2	Q9UKL4	321 aa		18.79	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms