RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 A0A0G2JLL6 359 aaPredicted RBP13.54□□□□□ -0.24
TRAF3-207ENST00000559734 IRF5Q13568 498 aa13.54□□□□□ -0.24
TRAF3-207ENST00000559734 PUM3Q15397 648 aaKnown RBP13.54□□□□□ -0.24
TRAF3-207ENST00000559734 PRRT2Q7Z6L0 340 aaPredicted RBP13.54□□□□□ -0.24
TRAF3-207ENST00000559734 ZSCAN29Q8IWY8 852 aaPredicted RBP13.54□□□□□ -0.24
TRAF3-207ENST00000559734 ZFPM1Q8IX07 1006 aa13.54□□□□□ -0.24
TRAF3-207ENST00000559734 ANKRD13CQ8N6S4 541 aa13.54□□□□□ -0.24
TRAF3-207ENST00000559734 VGLL2Q8N8G2 317 aa13.54□□□□□ -0.24
TRAF3-207ENST00000559734 WDR66Q8TBY9 1149 aa13.54□□□□□ -0.24
TRAF3-207ENST00000559734 GDF15Q99988 308 aa13.54□□□□□ -0.24
TRAF3-207ENST00000559734 FAM198AQ9UFP1 575 aa13.54□□□□□ -0.24
TRAF3-207ENST00000559734 AK9Q5TCS8 1911 aa13.54□□□□□ -0.24
TRAF3-207ENST00000559734 TRIM75PA6NK02 468 aa13.53□□□□□ -0.24
TRAF3-207ENST00000559734 PTPRAP18433 802 aa13.53□□□□□ -0.24
TRAF3-207ENST00000559734 CRISPLD2Q9H0B8 497 aa13.53□□□□□ -0.24
TRAF3-207ENST00000559734 STXBP5LQ9Y2K9 1186 aa13.53□□□□□ -0.24
TRAF3-207ENST00000559734 LRRFIP2Q9Y608 721 aaKnown RBP13.53□□□□□ -0.24
TRAF3-207ENST00000559734 SLC5A1P13866 664 aa13.52□□□□□ -0.25
TRAF3-207ENST00000559734 CAPN2P17655 700 aa13.52□□□□□ -0.25
TRAF3-207ENST00000559734 PRDX5P30044 214 aa13.52□□□□□ -0.25
TRAF3-207ENST00000559734 BMP8BP34820 402 aa13.52□□□□□ -0.25
TRAF3-207ENST00000559734 MAGEA10P43363 369 aaPredicted RBP13.52□□□□□ -0.25
TRAF3-207ENST00000559734 CCDC184Q52MB2 194 aa13.52□□□□□ -0.25
TRAF3-207ENST00000559734 CCDC84Q86UT8 332 aaPredicted RBP13.52□□□□□ -0.25
TRAF3-207ENST00000559734 UBE2OQ9C0C9 1292 aaKnown RBP13.52□□□□□ -0.25
TRAF3-207ENST00000559734 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.52□□□□□ -0.25
TRAF3-207ENST00000559734 CACNA1FO60840 1977 aa13.51□□□□□ -0.25
TRAF3-207ENST00000559734 ALPK3Q96L96 1907 aa13.51□□□□□ -0.25
TRAF3-207ENST00000559734 LDHBP07195 334 aaKnown RBP13.51□□□□□ -0.25
TRAF3-207ENST00000559734 SLURP2P0DP57 97 aa13.51□□□□□ -0.25
TRAF3-207ENST00000559734 RGS3P49796 1198 aa13.51□□□□□ -0.25
TRAF3-207ENST00000559734 RABL6Q3YEC7 729 aaPredicted RBP13.51□□□□□ -0.25
TRAF3-207ENST00000559734 GPR153Q6NV75 609 aa13.51□□□□□ -0.25
TRAF3-207ENST00000559734 TDHQ8IZJ6 230 aa13.51□□□□□ -0.25
TRAF3-207ENST00000559734 ANKRD44Q8N8A2 993 aa13.51□□□□□ -0.25
TRAF3-207ENST00000559734 COL25A1Q9BXS0 654 aaPredicted RBP13.51□□□□□ -0.25
TRAF3-207ENST00000559734 NBPF3Q9H094 633 aa13.51□□□□□ -0.25
TRAF3-207ENST00000559734 C11orf49Q9H6J7 331 aa13.51□□□□□ -0.25
TRAF3-207ENST00000559734 SLC45A1Q9Y2W3 748 aa13.51□□□□□ -0.25
TRAF3-207ENST00000559734 AFG3L2Q9Y4W6 797 aa13.51□□□□□ -0.25
TRAF3-207ENST00000559734 PHF20L1A8MW92 1017 aa13.5□□□□□ -0.25
TRAF3-207ENST00000559734 HMGCRP04035 888 aa13.5□□□□□ -0.25
TRAF3-207ENST00000559734 FGFR2P21802 821 aa13.5□□□□□ -0.25
TRAF3-207ENST00000559734 TRIM32Q13049 653 aa13.5□□□□□ -0.25
TRAF3-207ENST00000559734 ANKLE1Q8NAG6 615 aa13.5□□□□□ -0.25
TRAF3-207ENST00000559734 HMX1Q9NP08 348 aaPredicted RBP13.5□□□□□ -0.25
TRAF3-207ENST00000559734 MTMR10Q9NXD2 777 aa13.5□□□□□ -0.25
TRAF3-207ENST00000559734 PNMA3Q9UL41 463 aa13.5□□□□□ -0.25
TRAF3-207ENST00000559734 AGTPBP1Q9UPW5 1226 aa13.5□□□□□ -0.25
TRAF3-207ENST00000559734 ATRNL1Q5VV63 1379 aa13.49□□□□□ -0.25
TRAF3-207ENST00000559734 KIF16BQ96L93 1317 aa13.49□□□□□ -0.25
TRAF3-207ENST00000559734 DOCK2Q92608 1830 aa13.49□□□□□ -0.25
TRAF3-207ENST00000559734 PICALMQ13492 652 aa13.49□□□□□ -0.25
TRAF3-207ENST00000559734 LRIT3Q3SXY7 679 aa13.49□□□□□ -0.25
TRAF3-207ENST00000559734 TREML2Q5T2D2 321 aa13.49□□□□□ -0.25
TRAF3-207ENST00000559734 LPIN2Q92539 896 aa13.49□□□□□ -0.25
TRAF3-207ENST00000559734 MYH13Q9UKX3 1938 aa13.49□□□□□ -0.25
TRAF3-207ENST00000559734 UTYO14607 1347 aa13.48□□□□□ -0.25
TRAF3-207ENST00000559734 RPTORQ8N122 1335 aa13.48□□□□□ -0.25
TRAF3-207ENST00000559734 FAM110CQ1W6H9 321 aa13.48□□□□□ -0.25
TRAF3-207ENST00000559734 WDR63Q8IWG1 891 aa13.48□□□□□ -0.25
TRAF3-207ENST00000559734 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRAF3-207ENST00000559734 COL6A3P12111 3177 aa13.47□□□□□ -0.25
TRAF3-207ENST00000559734 DDTLA6NHG4 134 aaPredicted RBP13.47□□□□□ -0.25
TRAF3-207ENST00000559734 CTNND1O60716 968 aaKnown RBP13.47□□□□□ -0.25
TRAF3-207ENST00000559734 ENTPD3O75355 529 aa13.47□□□□□ -0.25
TRAF3-207ENST00000559734 SH3BP5LQ7L8J4 393 aa13.47□□□□□ -0.25
TRAF3-207ENST00000559734 GNL3LQ9NVN8 582 aaKnown RBP13.47□□□□□ -0.25
TRAF3-207ENST00000559734 RNF216Q9NWF9 866 aaPredicted RBP13.47□□□□□ -0.25
TRAF3-207ENST00000559734 LAMA3Q16787 3333 aa13.47□□□□□ -0.25
TRAF3-207ENST00000559734 DDX60LQ5H9U9 1706 aaKnown RBP13.47□□□□□ -0.25
TRAF3-207ENST00000559734 DOCK1Q14185 1865 aa13.46□□□□□ -0.25
TRAF3-207ENST00000559734 FAM196BA6NMK8 535 aa13.46□□□□□ -0.25
TRAF3-207ENST00000559734 EYA2O00167 538 aa13.46□□□□□ -0.25
TRAF3-207ENST00000559734 CYP2B6P20813 491 aa13.46□□□□□ -0.25
TRAF3-207ENST00000559734 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.25
TRAF3-207ENST00000559734 MDM2Q00987 491 aaPredicted RBP13.46□□□□□ -0.25
TRAF3-207ENST00000559734 DZIP1Q86YF9 867 aaKnown RBP13.46□□□□□ -0.25
TRAF3-207ENST00000559734 FAM161BQ96MY7 647 aa13.46□□□□□ -0.25
TRAF3-207ENST00000559734 SIL1Q9H173 461 aa13.46□□□□□ -0.25
TRAF3-207ENST00000559734 GCLCP48506 637 aaPredicted RBP13.45□□□□□ -0.26
TRAF3-207ENST00000559734 SPP2Q13103 211 aa13.45□□□□□ -0.26
TRAF3-207ENST00000559734 ATP2B3Q16720 1220 aa13.45□□□□□ -0.26
TRAF3-207ENST00000559734 TRIB2Q92519 343 aa13.45□□□□□ -0.26
TRAF3-207ENST00000559734 IDI2Q9BXS1 227 aa13.45□□□□□ -0.26
TRAF3-207ENST00000559734 DDX4Q9NQI0 724 aaKnown RBP13.45□□□□□ -0.26
TRAF3-207ENST00000559734 DENND2AQ9ULE3 1009 aa13.45□□□□□ -0.26
TRAF3-207ENST00000559734 PFASO15067 1338 aa13.44□□□□□ -0.26
TRAF3-207ENST00000559734 PRKAR2AP13861 404 aaKnown RBP13.44□□□□□ -0.26
TRAF3-207ENST00000559734 BTDP43251 543 aa13.44□□□□□ -0.26
TRAF3-207ENST00000559734 PHKA1P46020 1223 aa13.44□□□□□ -0.26
TRAF3-207ENST00000559734 HMGCS2P54868 508 aa13.44□□□□□ -0.26
TRAF3-207ENST00000559734 PABPC4Q13310 644 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAF3-207ENST00000559734 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAF3-207ENST00000559734 ABCF2Q9UG63 623 aa13.44□□□□□ -0.26
TRAF3-207ENST00000559734 OGDHLQ9ULD0 1010 aa13.44□□□□□ -0.26
TRAF3-207ENST00000559734 PTPRFP10586 1907 aa13.44□□□□□ -0.26
TRAF3-207ENST00000559734 RFX7Q2KHR2 1363 aa13.44□□□□□ -0.26
TRAF3-207ENST00000559734 GAKO14976 1311 aa13.43□□□□□ -0.26
TRAF3-207ENST00000559734 SALL1Q9NSC2 1324 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms