RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 EAF2Q96CJ1 260 aaPredicted RBP15.15■□□□□ 0.02
CDC42BPB-202ENST00000558321 BCL11AQ9H165 835 aa15.15■□□□□ 0.02
CDC42BPB-202ENST00000558321 ZNF112Q9UJU3 913 aa15.15■□□□□ 0.02
CDC42BPB-202ENST00000558321 APBB1O00213 710 aa15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 IRF6O14896 467 aa15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 BAG3O95817 575 aa15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 MAP4K4O95819 1239 aaPredicted RBP15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 ZAP70P43403 619 aa15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 RHBDL3P58872 404 aa15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 PPATQ06203 517 aa15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 PPIL2Q13356 520 aa15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 TAF1CQ15572 869 aaPredicted RBP15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 AACSQ86V21 672 aa15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 RPAP2Q8IXW5 612 aaPredicted RBP15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 ZNF512BQ96KM6 892 aaPredicted RBP15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 ZFYVE28Q9HCC9 887 aa15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 DDX4Q9NQI0 724 aaKnown RBP15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 PICK1Q9NRD5 415 aa15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 DBNLQ9UJU6 430 aaKnown RBP15.14■□□□□ 0.01
CDC42BPB-202ENST00000558321 DDTLA6NHG4 134 aaPredicted RBP15.13■□□□□ 0.01
CDC42BPB-202ENST00000558321 CYP2E1P05181 493 aaPredicted RBP15.13■□□□□ 0.01
CDC42BPB-202ENST00000558321 SH3BP5LQ7L8J4 393 aa15.13■□□□□ 0.01
CDC42BPB-202ENST00000558321 TEX11Q8IYF3 940 aa15.13■□□□□ 0.01
CDC42BPB-202ENST00000558321 ERO1AQ96HE7 468 aa15.13■□□□□ 0.01
CDC42BPB-202ENST00000558321 IL1RAPL2Q9NP60 686 aa15.13■□□□□ 0.01
CDC42BPB-202ENST00000558321 ZBTB40Q9NUA8 1239 aa15.13■□□□□ 0.01
CDC42BPB-202ENST00000558321 TLR7Q9NYK1 1049 aaKnown RBP15.13■□□□□ 0.01
CDC42BPB-202ENST00000558321 AK9Q5TCS8 1911 aa15.12■□□□□ 0.01
CDC42BPB-202ENST00000558321 MYH2Q9UKX2 1941 aa15.12■□□□□ 0.01
CDC42BPB-202ENST00000558321 SP3Q02447 781 aa15.12■□□□□ 0.01
CDC42BPB-202ENST00000558321 FAM43AQ8N2R8 423 aa15.12■□□□□ 0.01
CDC42BPB-202ENST00000558321 HPS5Q9UPZ3 1129 aa15.12■□□□□ 0.01
CDC42BPB-202ENST00000558321 TRIM17Q9Y577 477 aa15.12■□□□□ 0.01
CDC42BPB-202ENST00000558321 OTOFQ9HC10 1997 aa15.11■□□□□ 0.01
CDC42BPB-202ENST00000558321 BTBD19C9JJ37 291 aa15.11■□□□□ 0.01
CDC42BPB-202ENST00000558321 NPM3O75607 178 aaKnown RBP15.11■□□□□ 0.01
CDC42BPB-202ENST00000558321 IDH1O75874 414 aaKnown RBP15.11■□□□□ 0.01
CDC42BPB-202ENST00000558321 PLCG2P16885 1265 aa15.11■□□□□ 0.01
CDC42BPB-202ENST00000558321 PDE3AQ14432 1141 aa15.11■□□□□ 0.01
CDC42BPB-202ENST00000558321 NOL9Q5SY16 702 aaKnown RBP15.11■□□□□ 0.01
CDC42BPB-202ENST00000558321 FBXO46Q6PJ61 603 aaPredicted RBP15.11■□□□□ 0.01
CDC42BPB-202ENST00000558321 CLASRPQ8N2M8 674 aaKnown RBP15.11■□□□□ 0.01
CDC42BPB-202ENST00000558321 RHPN1Q8TCX5 695 aa15.11■□□□□ 0.01
CDC42BPB-202ENST00000558321 CD99L2Q8TCZ2 262 aa15.11■□□□□ 0.01
CDC42BPB-202ENST00000558321 SH3RF3Q8TEJ3 882 aaPredicted RBP15.11■□□□□ 0.01
CDC42BPB-202ENST00000558321 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.11■□□□□ 0.01
CDC42BPB-202ENST00000558321 PIH1D3Q9NQM4 214 aaKnown RBP15.11■□□□□ 0.01
CDC42BPB-202ENST00000558321 AATFQ9NY61 560 aaKnown RBP eCLIP15.11■□□□□ 0.01
CDC42BPB-202ENST00000558321 PHF20L1A8MW92 1017 aa15.1■□□□□ 0.01
CDC42BPB-202ENST00000558321 IFIT2P09913 472 aaKnown RBP15.1■□□□□ 0.01
CDC42BPB-202ENST00000558321 CYP7A1P22680 504 aa15.1■□□□□ 0.01
CDC42BPB-202ENST00000558321 ARHGEF6Q15052 776 aa15.1■□□□□ 0.01
CDC42BPB-202ENST00000558321 SCYL3Q8IZE3 742 aa15.1■□□□□ 0.01
CDC42BPB-202ENST00000558321 KIF1BPQ96EK5 621 aa15.1■□□□□ 0.01
CDC42BPB-202ENST00000558321 ZHX2Q9Y6X8 837 aa15.1■□□□□ 0.01
CDC42BPB-202ENST00000558321 CTNND1O60716 968 aaKnown RBP15.09■□□□□ 0.01
CDC42BPB-202ENST00000558321 RAB11FIP3O75154 756 aa15.09■□□□□ 0.01
CDC42BPB-202ENST00000558321 SLURP2P0DP57 97 aa15.09■□□□□ 0.01
CDC42BPB-202ENST00000558321 MAP3K10Q02779 954 aa15.09■□□□□ 0.01
CDC42BPB-202ENST00000558321 C20orf194Q5TEA3 1177 aa15.09■□□□□ 0.01
CDC42BPB-202ENST00000558321 OTOP1Q7RTM1 612 aa15.09■□□□□ 0.01
CDC42BPB-202ENST00000558321 SIRT2Q8IXJ6 389 aa15.09■□□□□ 0.01
CDC42BPB-202ENST00000558321 PIAS4Q8N2W9 510 aaPredicted RBP15.09■□□□□ 0.01
CDC42BPB-202ENST00000558321 TGFBRAP1Q8WUH2 860 aa15.09■□□□□ 0.01
CDC42BPB-202ENST00000558321 OSBPL5Q9H0X9 879 aaPredicted RBP15.09■□□□□ 0.01
CDC42BPB-202ENST00000558321 EFCC1Q9HA90 598 aa15.09■□□□□ 0.01
CDC42BPB-202ENST00000558321 ZCCHC17Q9NP64 241 aaKnown RBP15.09■□□□□ 0.01
CDC42BPB-202ENST00000558321 RFX7Q2KHR2 1363 aa15.09■□□□□ 0.01
CDC42BPB-202ENST00000558321 CXCL11O14625 94 aa15.08■□□□□ 0
CDC42BPB-202ENST00000558321 TBC1D12O60347 775 aa15.08■□□□□ 0
CDC42BPB-202ENST00000558321 IGSF3O75054 1194 aa15.08■□□□□ 0
CDC42BPB-202ENST00000558321 PTPRAP18433 802 aa15.08■□□□□ 0
CDC42BPB-202ENST00000558321 SOX10P56693 466 aa15.08■□□□□ 0
CDC42BPB-202ENST00000558321 PPP4CP60510 307 aa15.08■□□□□ 0
CDC42BPB-202ENST00000558321 MLLT1Q03111 559 aaPredicted RBP15.08■□□□□ 0
CDC42BPB-202ENST00000558321 MAP3K12Q12852 859 aa15.08■□□□□ 0
CDC42BPB-202ENST00000558321 KCNH4Q9UQ05 1017 aa15.08■□□□□ 0
CDC42BPB-202ENST00000558321 NDUFB9Q9Y6M9 179 aa15.08■□□□□ 0
CDC42BPB-202ENST00000558321 ATRNL1Q5VV63 1379 aa15.08■□□□□ 0
CDC42BPB-202ENST00000558321 FAM196BA6NMK8 535 aa15.07■□□□□ 0
CDC42BPB-202ENST00000558321 PDHXO00330 501 aa15.07■□□□□ 0
CDC42BPB-202ENST00000558321 TLR2O60603 784 aa15.07■□□□□ 0
CDC42BPB-202ENST00000558321 RGS19P49795 217 aa15.07■□□□□ 0
CDC42BPB-202ENST00000558321 KIF22Q14807 665 aa15.07■□□□□ 0
CDC42BPB-202ENST00000558321 ANKRD23Q86SG2 305 aa15.07■□□□□ 0
CDC42BPB-202ENST00000558321 ADGRA1Q86SQ6 560 aa15.07■□□□□ 0
CDC42BPB-202ENST00000558321 MAPKAPK5Q8IW41 473 aa15.07■□□□□ 0
CDC42BPB-202ENST00000558321 TRIM34Q9BYJ4 488 aa15.07■□□□□ 0
CDC42BPB-202ENST00000558321 PI4KBQ9UBF8 816 aa15.07■□□□□ 0
CDC42BPB-202ENST00000558321 DYNLL1P63167 89 aaKnown RBP15.06■□□□□ 0
CDC42BPB-202ENST00000558321 TTF1Q15361 905 aaPredicted RBP15.06■□□□□ 0
CDC42BPB-202ENST00000558321 GADL1Q6ZQY3 521 aa15.06■□□□□ 0
CDC42BPB-202ENST00000558321 FASTKD5Q7L8L6 764 aaKnown RBP15.06■□□□□ 0
CDC42BPB-202ENST00000558321 MAGEB6Q8N7X4 407 aa15.06■□□□□ 0
CDC42BPB-202ENST00000558321 DHX36Q9H2U1 1008 aaKnown RBP15.06■□□□□ 0
CDC42BPB-202ENST00000558321 ANTXR1Q9H6X2 564 aa15.06■□□□□ 0
CDC42BPB-202ENST00000558321 TRIM75PA6NK02 468 aa15.05■□□□□ -0
CDC42BPB-202ENST00000558321 USP5P45974 858 aa15.05■□□□□ -0
CDC42BPB-202ENST00000558321 CRACR2BQ8N4Y2 399 aaPredicted RBP15.05■□□□□ -0
CDC42BPB-202ENST00000558321 MIGA1Q8NAN2 632 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms