RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 SNX14Q9Y5W7 946 aa13.77□□□□□ -0.2
RORA-207ENST00000558234 CWC27Q6UX04 472 aaKnown RBP13.77□□□□□ -0.21
RORA-207ENST00000558234 ALDH8A1Q9H2A2 487 aaPredicted RBP13.77□□□□□ -0.21
RORA-207ENST00000558234 IDH1O75874 414 aaKnown RBP13.77□□□□□ -0.21
RORA-207ENST00000558234 CYP7A1P22680 504 aa13.77□□□□□ -0.21
RORA-207ENST00000558234 GABPAQ06546 454 aa13.77□□□□□ -0.21
RORA-207ENST00000558234 NFIAQ12857 509 aa13.77□□□□□ -0.21
RORA-207ENST00000558234 MCMDC2Q4G0Z9 681 aa13.77□□□□□ -0.21
RORA-207ENST00000558234 DZIP1Q86YF9 867 aaKnown RBP13.77□□□□□ -0.21
RORA-207ENST00000558234 SLF2Q8IX21 1173 aa13.77□□□□□ -0.21
RORA-207ENST00000558234 FSD1Q9BTV5 496 aa13.77□□□□□ -0.21
RORA-207ENST00000558234 ENTPD3O75355 529 aa13.76□□□□□ -0.21
RORA-207ENST00000558234 ITGBL1O95965 494 aaPredicted RBP13.76□□□□□ -0.21
RORA-207ENST00000558234 ANAPC4Q9UJX5 808 aa13.76□□□□□ -0.21
RORA-207ENST00000558234 PPP2R3BQ9Y5P8 575 aa13.76□□□□□ -0.21
RORA-207ENST00000558234 RABEP1Q15276 862 aa13.76□□□□□ -0.21
RORA-207ENST00000558234 SBK1Q52WX2 424 aa13.76□□□□□ -0.21
RORA-207ENST00000558234 ZFPM1Q8IX07 1006 aa13.76□□□□□ -0.21
RORA-207ENST00000558234 RAI14Q9P0K7 980 aa13.76□□□□□ -0.21
RORA-207ENST00000558234 MYH4Q9Y623 1939 aa13.76□□□□□ -0.21
RORA-207ENST00000558234 GPAA1O43292 621 aa13.76□□□□□ -0.21
RORA-207ENST00000558234 VPS53Q5VIR6 699 aa13.76□□□□□ -0.21
RORA-207ENST00000558234 RRAGCQ9HB90 399 aa13.76□□□□□ -0.21
RORA-207ENST00000558234 HDAC9Q9UKV0 1011 aa13.76□□□□□ -0.21
RORA-207ENST00000558234 G3V3G9 751 aa13.75□□□□□ -0.21
RORA-207ENST00000558234 DCAF8Q5TAQ9 597 aa13.75□□□□□ -0.21
RORA-207ENST00000558234 PNMA8AQ86V59 439 aaPredicted RBP13.75□□□□□ -0.21
RORA-207ENST00000558234 ZNF784Q8NCA9 323 aaPredicted RBP13.75□□□□□ -0.21
RORA-207ENST00000558234 TAF6LQ9Y6J9 622 aa13.75□□□□□ -0.21
RORA-207ENST00000558234 LDHCP07864 332 aa13.75□□□□□ -0.21
RORA-207ENST00000558234 VEGFAP15692 232 aaPredicted RBP13.75□□□□□ -0.21
RORA-207ENST00000558234 EVX2Q03828 476 aa13.75□□□□□ -0.21
RORA-207ENST00000558234 DSCC1Q9BVC3 393 aa13.75□□□□□ -0.21
RORA-207ENST00000558234 DNAJC18Q9H819 358 aa13.75□□□□□ -0.21
RORA-207ENST00000558234 DCP1AQ9NPI6 582 aaPredicted RBP13.75□□□□□ -0.21
RORA-207ENST00000558234 PLIN4Q96Q06 1357 aa13.75□□□□□ -0.21
RORA-207ENST00000558234 TBC1D10BQ4KMP7 808 aaPredicted RBP13.75□□□□□ -0.21
RORA-207ENST00000558234 TM6SF1Q9BZW5 370 aa13.75□□□□□ -0.21
RORA-207ENST00000558234 OSBPL5Q9H0X9 879 aaPredicted RBP13.75□□□□□ -0.21
RORA-207ENST00000558234 AATFQ9NY61 560 aaKnown RBP eCLIP13.75□□□□□ -0.21
RORA-207ENST00000558234 MAGEB6P1A0A0J9YX57 407 aa13.74□□□□□ -0.21
RORA-207ENST00000558234 F8W031 263 aaPredicted RBP13.74□□□□□ -0.21
RORA-207ENST00000558234 MBD4O95243 580 aa13.74□□□□□ -0.21
RORA-207ENST00000558234 CCDC129Q6ZRS4 1044 aa13.74□□□□□ -0.21
RORA-207ENST00000558234 LDHDQ86WU2 507 aa13.74□□□□□ -0.21
RORA-207ENST00000558234 EHD4Q9H223 541 aa13.74□□□□□ -0.21
RORA-207ENST00000558234 TDRD3Q9H7E2 651 aaKnown RBP13.74□□□□□ -0.21
RORA-207ENST00000558234 PRKAB2O43741 272 aa13.74□□□□□ -0.21
RORA-207ENST00000558234 FRAT2O75474 233 aaPredicted RBP13.74□□□□□ -0.21
RORA-207ENST00000558234 HSPD1P10809 573 aaKnown RBP13.74□□□□□ -0.21
RORA-207ENST00000558234 ARMT1Q9H993 441 aa13.74□□□□□ -0.21
RORA-207ENST00000558234 TBC1D12O60347 775 aa13.74□□□□□ -0.21
RORA-207ENST00000558234 DLGAP5Q15398 846 aa13.74□□□□□ -0.21
RORA-207ENST00000558234 MAP3K11Q16584 847 aa13.74□□□□□ -0.21
RORA-207ENST00000558234 CDAN1Q8IWY9 1227 aa13.74□□□□□ -0.21
RORA-207ENST00000558234 H7C1D1 291 aa13.73□□□□□ -0.21
RORA-207ENST00000558234 NOVP48745 357 aa13.73□□□□□ -0.21
RORA-207ENST00000558234 FAM151AQ8WW52 585 aa13.73□□□□□ -0.21
RORA-207ENST00000558234 ATP8A2Q9NTI2 1148 aa13.73□□□□□ -0.21
RORA-207ENST00000558234 ZNF112Q9UJU3 913 aa13.73□□□□□ -0.21
RORA-207ENST00000558234 GNAT2P19087 354 aa13.73□□□□□ -0.21
RORA-207ENST00000558234 SLC4A3P48751 1232 aa13.73□□□□□ -0.21
RORA-207ENST00000558234 ZSWIM6Q9HCJ5 1215 aa13.73□□□□□ -0.21
RORA-207ENST00000558234 PATL2C9JE40 543 aaKnown RBP13.73□□□□□ -0.21
RORA-207ENST00000558234 PLCG2P16885 1265 aa13.73□□□□□ -0.21
RORA-207ENST00000558234 MIGA1Q8NAN2 632 aa13.73□□□□□ -0.21
RORA-207ENST00000558234 NKX2-3Q8TAU0 364 aa13.73□□□□□ -0.21
RORA-207ENST00000558234 PHF20L1A8MW92 1017 aa13.72□□□□□ -0.21
RORA-207ENST00000558234 CUL4AQ13619 759 aa13.72□□□□□ -0.21
RORA-207ENST00000558234 LRRFIP1Q32MZ4 808 aaKnown RBP13.72□□□□□ -0.21
RORA-207ENST00000558234 OGFOD1Q8N543 542 aa13.72□□□□□ -0.21
RORA-207ENST00000558234 DCAF8L1A6NGE4 600 aa13.72□□□□□ -0.21
RORA-207ENST00000558234 SMIM22K7EJ46 135 aa13.72□□□□□ -0.21
RORA-207ENST00000558234 ADCK5Q3MIX3 580 aa13.72□□□□□ -0.21
RORA-207ENST00000558234 CTR9Q6PD62 1173 aa13.72□□□□□ -0.21
RORA-207ENST00000558234 APOBEC3FQ8IUX4 373 aaKnown RBP13.72□□□□□ -0.21
RORA-207ENST00000558234 RUFY2Q8WXA3 655 aa13.72□□□□□ -0.21
RORA-207ENST00000558234 FBXW7Q969H0 707 aa13.72□□□□□ -0.21
RORA-207ENST00000558234 USP40Q9NVE5 1235 aa13.72□□□□□ -0.21
RORA-207ENST00000558234 GGA3Q9NZ52 723 aa13.72□□□□□ -0.21
RORA-207ENST00000558234 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.72□□□□□ -0.21
RORA-207ENST00000558234 DDTLA6NHG4 134 aaPredicted RBP13.72□□□□□ -0.21
RORA-207ENST00000558234 ANGEL2Q5VTE6 544 aaKnown RBP13.72□□□□□ -0.21
RORA-207ENST00000558234 FBXL16Q8N461 479 aa13.72□□□□□ -0.21
RORA-207ENST00000558234 SLC27A2O14975 620 aa13.71□□□□□ -0.21
RORA-207ENST00000558234 RBM46Q8TBY0 533 aaKnown RBP13.71□□□□□ -0.21
RORA-207ENST00000558234 LMOD1P29536 600 aaPredicted RBP13.71□□□□□ -0.21
RORA-207ENST00000558234 TATDN1Q6P1N9 297 aa13.71□□□□□ -0.21
RORA-207ENST00000558234 C12orf60Q5U649 245 aa13.71□□□□□ -0.21
RORA-207ENST00000558234 AGXT2Q9BYV1 514 aa13.71□□□□□ -0.21
RORA-207ENST00000558234 TCHHQ07283 1943 aa13.71□□□□□ -0.22
RORA-207ENST00000558234 BAG3O95817 575 aa13.71□□□□□ -0.22
RORA-207ENST00000558234 CREB3L3Q68CJ9 461 aa13.71□□□□□ -0.22
RORA-207ENST00000558234 IFNL3Q8IZI9 196 aa13.71□□□□□ -0.22
RORA-207ENST00000558234 ANO2Q9NQ90 1003 aa13.71□□□□□ -0.22
RORA-207ENST00000558234 DIAPH3Q9NSV4 1193 aa13.71□□□□□ -0.22
RORA-207ENST00000558234 RBM8AQ9Y5S9 174 aaKnown RBP13.71□□□□□ -0.22
RORA-207ENST00000558234 ST3GAL1Q11201 340 aa13.7□□□□□ -0.22
RORA-207ENST00000558234 SDR42E1Q8WUS8 393 aa13.7□□□□□ -0.22
RORA-207ENST00000558234 K7ELQ4 463 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms