RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 SPDYE6P0CI01 402 aa14.75□□□□□ -0.05
TPM1-209ENST00000558072 TNNI2P48788 182 aa14.75□□□□□ -0.05
TPM1-209ENST00000558072 PTH1RQ03431 593 aa14.75□□□□□ -0.05
TPM1-209ENST00000558072 TRDNQ13061 729 aa14.75□□□□□ -0.05
TPM1-209ENST00000558072 NECTIN1Q15223 517 aa14.75□□□□□ -0.05
TPM1-209ENST00000558072 SBK1Q52WX2 424 aa14.75□□□□□ -0.05
TPM1-209ENST00000558072 APOBEC3HQ6NTF7 200 aaKnown RBP14.75□□□□□ -0.05
TPM1-209ENST00000558072 TTC6Q86TZ1 520 aa14.75□□□□□ -0.05
TPM1-209ENST00000558072 SH3RF3Q8TEJ3 882 aaPredicted RBP14.75□□□□□ -0.05
TPM1-209ENST00000558072 L3MBTL3Q96JM7 780 aaPredicted RBP14.75□□□□□ -0.05
TPM1-209ENST00000558072 PRMT6Q96LA8 375 aaPredicted RBP14.75□□□□□ -0.05
TPM1-209ENST00000558072 IDI2Q9BXS1 227 aa14.75□□□□□ -0.05
TPM1-209ENST00000558072 DHX36Q9H2U1 1008 aaKnown RBP14.75□□□□□ -0.05
TPM1-209ENST00000558072 TDRD3Q9H7E2 651 aaKnown RBP14.75□□□□□ -0.05
TPM1-209ENST00000558072 NAV1Q8NEY1 1877 aa14.75□□□□□ -0.05
TPM1-209ENST00000558072 PRKAB2O43741 272 aa14.74□□□□□ -0.05
TPM1-209ENST00000558072 ENTPD3O75355 529 aa14.74□□□□□ -0.05
TPM1-209ENST00000558072 RHBDL3P58872 404 aa14.74□□□□□ -0.05
TPM1-209ENST00000558072 EVX2Q03828 476 aa14.74□□□□□ -0.05
TPM1-209ENST00000558072 SLC4A8Q2Y0W8 1093 aa14.74□□□□□ -0.05
TPM1-209ENST00000558072 EAPPQ56P03 285 aaPredicted RBP14.74□□□□□ -0.05
TPM1-209ENST00000558072 CREB3L3Q68CJ9 461 aa14.74□□□□□ -0.05
TPM1-209ENST00000558072 CDC42EP5Q6NZY7 148 aa14.74□□□□□ -0.05
TPM1-209ENST00000558072 KCNB2Q92953 911 aa14.74□□□□□ -0.05
TPM1-209ENST00000558072 IL17RAQ96F46 866 aa14.74□□□□□ -0.05
TPM1-209ENST00000558072 CNNM2Q9H8M5 875 aa14.74□□□□□ -0.05
TPM1-209ENST00000558072 HACL1Q9UJ83 578 aa14.74□□□□□ -0.05
TPM1-209ENST00000558072 DDX60LQ5H9U9 1706 aaKnown RBP14.74□□□□□ -0.05
TPM1-209ENST00000558072 FOCADQ5VW36 1801 aa14.73□□□□□ -0.05
TPM1-209ENST00000558072 HLA-DOAP06340 250 aa14.73□□□□□ -0.05
TPM1-209ENST00000558072 EPHX2P34913 555 aa14.73□□□□□ -0.05
TPM1-209ENST00000558072 TGFBRAP1Q8WUH2 860 aa14.73□□□□□ -0.05
TPM1-209ENST00000558072 HOOK2Q96ED9 719 aa14.73□□□□□ -0.05
TPM1-209ENST00000558072 ZBED3Q96IU2 234 aaPredicted RBP14.73□□□□□ -0.05
TPM1-209ENST00000558072 TM6SF1Q9BZW5 370 aa14.73□□□□□ -0.05
TPM1-209ENST00000558072 TAF1DQ9H5J8 278 aaPredicted RBP14.73□□□□□ -0.05
TPM1-209ENST00000558072 DCP1AQ9NPI6 582 aaPredicted RBP14.73□□□□□ -0.05
TPM1-209ENST00000558072 ADARB2Q9NS39 739 aaKnown RBP14.73□□□□□ -0.05
TPM1-209ENST00000558072 ANAPC4Q9UJX5 808 aa14.73□□□□□ -0.05
TPM1-209ENST00000558072 SMIM22K7EJ46 135 aa14.72□□□□□ -0.05
TPM1-209ENST00000558072 WNT10BO00744 389 aa14.72□□□□□ -0.05
TPM1-209ENST00000558072 SLC27A2O14975 620 aa14.72□□□□□ -0.05
TPM1-209ENST00000558072 POLR3DP05423 398 aaPredicted RBP14.72□□□□□ -0.05
TPM1-209ENST00000558072 SLURP2P0DP57 97 aa14.72□□□□□ -0.05
TPM1-209ENST00000558072 YY1P25490 414 aa14.72□□□□□ -0.05
TPM1-209ENST00000558072 NFIAQ12857 509 aa14.72□□□□□ -0.05
TPM1-209ENST00000558072 RABEP1Q15276 862 aa14.72□□□□□ -0.05
TPM1-209ENST00000558072 VPS53Q5VIR6 699 aa14.72□□□□□ -0.05
TPM1-209ENST00000558072 FAM83AQ86UY5 434 aa14.72□□□□□ -0.05
TPM1-209ENST00000558072 CDAN1Q8IWY9 1227 aa14.72□□□□□ -0.05
TPM1-209ENST00000558072 KRT23Q9C075 422 aa14.72□□□□□ -0.05
TPM1-209ENST00000558072 DDX4Q9NQI0 724 aaKnown RBP14.72□□□□□ -0.05
TPM1-209ENST00000558072 MCM9Q9NXL9 1143 aa14.72□□□□□ -0.05
TPM1-209ENST00000558072 GGA3Q9NZ52 723 aa14.72□□□□□ -0.05
TPM1-209ENST00000558072 BAZ2AQ9UIF9 1905 aaKnown RBP14.72□□□□□ -0.05
TPM1-209ENST00000558072 FOXP2O15409 715 aa14.71□□□□□ -0.05
TPM1-209ENST00000558072 PDE4BQ07343 736 aa14.71□□□□□ -0.05
TPM1-209ENST00000558072 PICALMQ13492 652 aa14.71□□□□□ -0.05
TPM1-209ENST00000558072 SPDYE2Q495Y8 402 aa14.71□□□□□ -0.05
TPM1-209ENST00000558072 APOBEC3FQ8IUX4 373 aaKnown RBP14.71□□□□□ -0.05
TPM1-209ENST00000558072 SDR42E1Q8WUS8 393 aa14.71□□□□□ -0.05
TPM1-209ENST00000558072 VEZTQ9HBM0 779 aa14.71□□□□□ -0.05
TPM1-209ENST00000558072 ZNF70Q9UC06 446 aaPredicted RBP14.71□□□□□ -0.05
TPM1-209ENST00000558072 SIPA1L1O43166 1804 aa14.71□□□□□ -0.06
TPM1-209ENST00000558072 COL2A1P02458 1487 aaPredicted RBP14.7□□□□□ -0.06
TPM1-209ENST00000558072 TCP10L2B9ZVM9 353 aa14.7□□□□□ -0.06
TPM1-209ENST00000558072 ST18O60284 1047 aa14.7□□□□□ -0.06
TPM1-209ENST00000558072 ANP32AP39687 249 aaKnown RBP14.7□□□□□ -0.06
TPM1-209ENST00000558072 FMR1Q06787 632 aaKnown RBP eCLIP14.7□□□□□ -0.06
TPM1-209ENST00000558072 ANGEL2Q5VTE6 544 aaKnown RBP14.7□□□□□ -0.06
TPM1-209ENST00000558072 PRAMEF18Q5VWM3 479 aa14.7□□□□□ -0.06
TPM1-209ENST00000558072 MFSD6Q6ZSS7 791 aa14.7□□□□□ -0.06
TPM1-209ENST00000558072 USP50Q70EL3 339 aaPredicted RBP14.7□□□□□ -0.06
TPM1-209ENST00000558072 RALYLQ86SE5 291 aaKnown RBP14.7□□□□□ -0.06
TPM1-209ENST00000558072 PNMA8AQ86V59 439 aaPredicted RBP14.7□□□□□ -0.06
TPM1-209ENST00000558072 MAPKAPK5Q8IW41 473 aa14.7□□□□□ -0.06
TPM1-209ENST00000558072 ZFPM1Q8IX07 1006 aa14.7□□□□□ -0.06
TPM1-209ENST00000558072 NCOA7Q8NI08 942 aa14.7□□□□□ -0.06
TPM1-209ENST00000558072 ZC3H15Q8WU90 426 aaKnown RBP14.7□□□□□ -0.06
TPM1-209ENST00000558072 EPB41L4AQ9HCS5 686 aaPredicted RBP14.7□□□□□ -0.06
TPM1-209ENST00000558072 MKRN1Q9UHC7 482 aaKnown RBP14.7□□□□□ -0.06
TPM1-209ENST00000558072 SAP30BPQ9UHR5 308 aaKnown RBP14.7□□□□□ -0.06
TPM1-209ENST00000558072 PPP2R3BQ9Y5P8 575 aa14.7□□□□□ -0.06
TPM1-209ENST00000558072 FLT1P17948 1338 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 MINDY4BA8MYZ0 360 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 USP17L12C9JPN9 530 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 ADM5C9JUS6 153 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 USP17L21D6R901 530 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 WDHD1O75717 1129 aaPredicted RBP14.69□□□□□ -0.06
TPM1-209ENST00000558072 CYP21A2P08686 494 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 CYP2D6P10635 497 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 MCM2P49736 904 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 PPARAQ07869 468 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 TCP10Q12799 353 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 CCDC178Q5BJE1 867 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 PPP4R3BQ5MIZ7 849 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 AKNAD1Q5T1N1 836 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 CTR9Q6PD62 1173 aa14.69□□□□□ -0.06
TPM1-209ENST00000558072 FOXP4Q8IVH2 680 aaPredicted RBP14.69□□□□□ -0.06
TPM1-209ENST00000558072 STAG1Q8WVM7 1258 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms