RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 SPDYE5A6NIY4 337 aa7.57□□□□□ -1.2
TRPM1-204ENST00000557948 SMIM22K7EJ46 135 aa7.57□□□□□ -1.2
TRPM1-204ENST00000557948 TNPO2O14787 897 aaKnown RBP7.57□□□□□ -1.2
TRPM1-204ENST00000557948 ATP2B4P23634 1241 aa7.57□□□□□ -1.2
TRPM1-204ENST00000557948 CCDC85BQ15834 202 aaPredicted RBP7.57□□□□□ -1.2
TRPM1-204ENST00000557948 C9orf50Q5SZB4 431 aa7.57□□□□□ -1.2
TRPM1-204ENST00000557948 AKNAD1Q5T1N1 836 aa7.57□□□□□ -1.2
TRPM1-204ENST00000557948 TTLL5Q6EMB2 1281 aa7.57□□□□□ -1.2
TRPM1-204ENST00000557948 TYW1BQ6NUM6 668 aa7.57□□□□□ -1.2
TRPM1-204ENST00000557948 ANKRD23Q86SG2 305 aa7.57□□□□□ -1.2
TRPM1-204ENST00000557948 ERO1BQ86YB8 467 aa7.57□□□□□ -1.2
TRPM1-204ENST00000557948 ZNF428Q96B54 188 aa7.57□□□□□ -1.2
TRPM1-204ENST00000557948 HMX1Q9NP08 348 aaPredicted RBP7.57□□□□□ -1.2
TRPM1-204ENST00000557948 C11orf16Q9NQ32 467 aa7.57□□□□□ -1.2
TRPM1-204ENST00000557948 OGDHLQ9ULD0 1010 aa7.57□□□□□ -1.2
TRPM1-204ENST00000557948 MAST2Q6P0Q8 1798 aa7.56□□□□□ -1.2
TRPM1-204ENST00000557948 HMGCRP04035 888 aa7.56□□□□□ -1.2
TRPM1-204ENST00000557948 BCRP11274 1271 aa7.56□□□□□ -1.2
TRPM1-204ENST00000557948 MS4A1P11836 297 aa7.56□□□□□ -1.2
TRPM1-204ENST00000557948 BMP1P13497 986 aa7.56□□□□□ -1.2
TRPM1-204ENST00000557948 TNFAIP1Q13829 316 aa7.56□□□□□ -1.2
TRPM1-204ENST00000557948 AAK1Q2M2I8 961 aa7.56□□□□□ -1.2
TRPM1-204ENST00000557948 MCM10Q7L590 875 aa7.56□□□□□ -1.2
TRPM1-204ENST00000557948 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.56□□□□□ -1.2
TRPM1-204ENST00000557948 DDRGK1Q96HY6 314 aa7.56□□□□□ -1.2
TRPM1-204ENST00000557948 PHOX2BQ99453 314 aa7.56□□□□□ -1.2
TRPM1-204ENST00000557948 PARK7Q99497 189 aaKnown RBP7.56□□□□□ -1.2
TRPM1-204ENST00000557948 CACNA1BQ00975 2339 aa7.55□□□□□ -1.2
TRPM1-204ENST00000557948 CCER2I3L3R5 266 aa7.55□□□□□ -1.2
TRPM1-204ENST00000557948 U2SURPO15042 1029 aaKnown RBP7.55□□□□□ -1.2
TRPM1-204ENST00000557948 ST18O60284 1047 aa7.55□□□□□ -1.2
TRPM1-204ENST00000557948 NUDT7P0C024 238 aa7.55□□□□□ -1.2
TRPM1-204ENST00000557948 U2AF1L5P0DN76 240 aaPredicted RBP7.55□□□□□ -1.2
TRPM1-204ENST00000557948 COL6A1P12109 1028 aa7.55□□□□□ -1.2
TRPM1-204ENST00000557948 U2AF1Q01081 240 aaKnown RBP eCLIP7.55□□□□□ -1.2
TRPM1-204ENST00000557948 PPIL2Q13356 520 aa7.55□□□□□ -1.2
TRPM1-204ENST00000557948 COA7Q96BR5 231 aa7.55□□□□□ -1.2
TRPM1-204ENST00000557948 FAM89AQ96GI7 184 aa7.55□□□□□ -1.2
TRPM1-204ENST00000557948 THUMPD2Q9BTF0 503 aaKnown RBP7.55□□□□□ -1.2
TRPM1-204ENST00000557948 COA1Q9GZY4 146 aa7.55□□□□□ -1.2
TRPM1-204ENST00000557948 ZNF576Q9H609 170 aa7.55□□□□□ -1.2
TRPM1-204ENST00000557948 MIS18AQ9NYP9 233 aa7.55□□□□□ -1.2
TRPM1-204ENST00000557948 CXXC1Q9P0U4 656 aaPredicted RBP7.55□□□□□ -1.2
TRPM1-204ENST00000557948 MED23Q9ULK4 1368 aa7.55□□□□□ -1.2
TRPM1-204ENST00000557948 PRR33A8MZF0 331 aa7.54□□□□□ -1.2
TRPM1-204ENST00000557948 HOXB3P14651 431 aaPredicted RBP7.54□□□□□ -1.2
TRPM1-204ENST00000557948 DNAJB2P25686 324 aa7.54□□□□□ -1.2
TRPM1-204ENST00000557948 RBM5P52756 815 aaKnown RBP eCLIP7.54□□□□□ -1.2
TRPM1-204ENST00000557948 FOSBP53539 338 aa7.54□□□□□ -1.2
TRPM1-204ENST00000557948 TAF7Q15545 349 aaPredicted RBP7.54□□□□□ -1.2
TRPM1-204ENST00000557948 CFAP100Q494V2 611 aa7.54□□□□□ -1.2
TRPM1-204ENST00000557948 ARSIQ5FYB1 569 aa7.54□□□□□ -1.2
TRPM1-204ENST00000557948 RIC3Q7Z5B4 369 aa7.54□□□□□ -1.2
TRPM1-204ENST00000557948 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.54□□□□□ -1.2
TRPM1-204ENST00000557948 NLRP7Q8WX94 980 aa7.54□□□□□ -1.2
TRPM1-204ENST00000557948 SEC31BQ9NQW1 1179 aa7.54□□□□□ -1.2
TRPM1-204ENST00000557948 KCNH4Q9UQ05 1017 aa7.54□□□□□ -1.2
TRPM1-204ENST00000557948 PCDHAC2Q9Y5I4 1007 aa7.54□□□□□ -1.2
TRPM1-204ENST00000557948 SNCAIPQ9Y6H5 919 aa7.54□□□□□ -1.2
TRPM1-204ENST00000557948 CFAP54Q96N23 3096 aa7.54□□□□□ -1.2
TRPM1-204ENST00000557948 AK9Q5TCS8 1911 aa7.54□□□□□ -1.2
TRPM1-204ENST00000557948 ARAP2Q8WZ64 1704 aa7.53□□□□□ -1.2
TRPM1-204ENST00000557948 CYP2C8P10632 490 aa7.53□□□□□ -1.2
TRPM1-204ENST00000557948 GTF2IP78347 998 aa7.53□□□□□ -1.2
TRPM1-204ENST00000557948 RTL5Q5HYW3 569 aaPredicted RBP7.53□□□□□ -1.2
TRPM1-204ENST00000557948 ZNF454Q8N9F8 522 aa7.53□□□□□ -1.2
TRPM1-204ENST00000557948 ZKSCAN4Q969J2 545 aaPredicted RBP7.53□□□□□ -1.2
TRPM1-204ENST00000557948 PRMT6Q96LA8 375 aaPredicted RBP7.53□□□□□ -1.2
TRPM1-204ENST00000557948 RNPC3Q96LT9 517 aaKnown RBP7.53□□□□□ -1.2
TRPM1-204ENST00000557948 UIMC1Q96RL1 719 aa7.53□□□□□ -1.2
TRPM1-204ENST00000557948 PANK3Q9H999 370 aa7.53□□□□□ -1.2
TRPM1-204ENST00000557948 SALL2Q9Y467 1007 aaPredicted RBP7.53□□□□□ -1.2
TRPM1-204ENST00000557948 WDFY4Q6ZS81 3184 aa7.53□□□□□ -1.2
TRPM1-204ENST00000557948 COL3A1P02461 1466 aaPredicted RBP7.53□□□□□ -1.2
TRPM1-204ENST00000557948 SPTBN4Q9H254 2564 aa7.53□□□□□ -1.2
TRPM1-204ENST00000557948 F8W031 263 aaPredicted RBP7.52□□□□□ -1.21
TRPM1-204ENST00000557948 IRS4O14654 1257 aaPredicted RBP7.52□□□□□ -1.21
TRPM1-204ENST00000557948 IGFBP4P22692 258 aa7.52□□□□□ -1.21
TRPM1-204ENST00000557948 KCNQ1P51787 676 aa7.52□□□□□ -1.21
TRPM1-204ENST00000557948 TFF2Q03403 129 aa7.52□□□□□ -1.21
TRPM1-204ENST00000557948 PPATQ06203 517 aa7.52□□□□□ -1.21
TRPM1-204ENST00000557948 AIMP1Q12904 312 aaKnown RBP7.52□□□□□ -1.21
TRPM1-204ENST00000557948 DCTN1Q14203 1278 aa7.52□□□□□ -1.21
TRPM1-204ENST00000557948 C6orf132Q5T0Z8 1188 aa7.52□□□□□ -1.21
TRPM1-204ENST00000557948 CDAN1Q8IWY9 1227 aa7.52□□□□□ -1.21
TRPM1-204ENST00000557948 TIFAQ96CG3 184 aa7.52□□□□□ -1.21
TRPM1-204ENST00000557948 PHACTR3Q96KR7 559 aa7.52□□□□□ -1.21
TRPM1-204ENST00000557948 FBXL18Q96ME1 805 aa7.52□□□□□ -1.21
TRPM1-204ENST00000557948 WRNIP1Q96S55 665 aa7.52□□□□□ -1.21
TRPM1-204ENST00000557948 SENP6Q9GZR1 1112 aaPredicted RBP7.52□□□□□ -1.21
TRPM1-204ENST00000557948 KCNH6Q9H252 994 aa7.52□□□□□ -1.21
TRPM1-204ENST00000557948 PRDM12Q9H4Q4 367 aa7.52□□□□□ -1.21
TRPM1-204ENST00000557948 XIRP2A4UGR9 3374 aa7.52□□□□□ -1.21
TRPM1-204ENST00000557948 SPEF2Q9C093 1822 aa7.52□□□□□ -1.21
TRPM1-204ENST00000557948 TNNI2P48788 182 aa7.51□□□□□ -1.21
TRPM1-204ENST00000557948 TRIM32Q13049 653 aa7.51□□□□□ -1.21
TRPM1-204ENST00000557948 CSPP1Q1MSJ5 1256 aa7.51□□□□□ -1.21
TRPM1-204ENST00000557948 GLIPR1L2Q4G1C9 344 aa7.51□□□□□ -1.21
TRPM1-204ENST00000557948 PADI6Q6TGC4 694 aa7.51□□□□□ -1.21
TRPM1-204ENST00000557948 COPS6Q7L5N1 327 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms