RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 MYH13Q9UKX3 1938 aa12.16□□□□□ -0.46
GABRB3-212ENST00000557641 K7ELQ4 463 aaPredicted RBP12.16□□□□□ -0.46
GABRB3-212ENST00000557641 CASTP20810 708 aaKnown RBP12.16□□□□□ -0.46
GABRB3-212ENST00000557641 TDO2P48775 406 aa12.16□□□□□ -0.46
GABRB3-212ENST00000557641 DYNLL1P63167 89 aaKnown RBP12.16□□□□□ -0.46
GABRB3-212ENST00000557641 ANKRD1Q15327 319 aa12.16□□□□□ -0.46
GABRB3-212ENST00000557641 CERS5Q8N5B7 392 aa12.16□□□□□ -0.46
GABRB3-212ENST00000557641 NLGN2Q8NFZ4 835 aa12.16□□□□□ -0.46
GABRB3-212ENST00000557641 TEKT1Q969V4 418 aa12.16□□□□□ -0.46
GABRB3-212ENST00000557641 FHDC1Q9C0D6 1143 aaPredicted RBP12.16□□□□□ -0.46
GABRB3-212ENST00000557641 AATFQ9NY61 560 aaKnown RBP eCLIP12.16□□□□□ -0.46
GABRB3-212ENST00000557641 TTF2Q9UNY4 1162 aaKnown RBP12.16□□□□□ -0.46
GABRB3-212ENST00000557641 E7EWF7 191 aa12.15□□□□□ -0.46
GABRB3-212ENST00000557641 NFKBIEO00221 500 aa12.15□□□□□ -0.46
GABRB3-212ENST00000557641 VIL1P09327 827 aaKnown RBP12.15□□□□□ -0.46
GABRB3-212ENST00000557641 C7P10643 843 aa12.15□□□□□ -0.46
GABRB3-212ENST00000557641 PCP11498 1178 aaKnown RBP12.15□□□□□ -0.46
GABRB3-212ENST00000557641 BTDP43251 543 aa12.15□□□□□ -0.46
GABRB3-212ENST00000557641 TRDNQ13061 729 aa12.15□□□□□ -0.46
GABRB3-212ENST00000557641 DIXDC1Q155Q3 683 aa12.15□□□□□ -0.46
GABRB3-212ENST00000557641 GRIK5Q16478 980 aa12.15□□□□□ -0.46
GABRB3-212ENST00000557641 ADCK5Q3MIX3 580 aa12.15□□□□□ -0.46
GABRB3-212ENST00000557641 TPRNQ4KMQ1 711 aa12.15□□□□□ -0.46
GABRB3-212ENST00000557641 SBK1Q52WX2 424 aa12.15□□□□□ -0.46
GABRB3-212ENST00000557641 HS6ST3Q8IZP7 471 aa12.15□□□□□ -0.46
GABRB3-212ENST00000557641 UPF3BQ9BZI7 483 aaKnown RBP12.15□□□□□ -0.46
GABRB3-212ENST00000557641 RNF41Q9H4P4 317 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-212ENST00000557641 CNNM2Q9H8M5 875 aa12.15□□□□□ -0.46
GABRB3-212ENST00000557641 EPB41L4AQ9HCS5 686 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-212ENST00000557641 PDRG1Q9NUG6 133 aa12.15□□□□□ -0.46
GABRB3-212ENST00000557641 ARPP21Q9UBL0 812 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-212ENST00000557641 ANAPC4Q9UJX5 808 aa12.15□□□□□ -0.46
GABRB3-212ENST00000557641 SERPINA10Q9UK55 444 aa12.15□□□□□ -0.46
GABRB3-212ENST00000557641 WDR19Q8NEZ3 1342 aa12.14□□□□□ -0.47
GABRB3-212ENST00000557641 YDJCA8MPS7 323 aa12.14□□□□□ -0.47
GABRB3-212ENST00000557641 PRKAB2O43741 272 aa12.14□□□□□ -0.47
GABRB3-212ENST00000557641 RPS6KB1P23443 525 aa12.14□□□□□ -0.47
GABRB3-212ENST00000557641 TNIP1Q15025 636 aa12.14□□□□□ -0.47
GABRB3-212ENST00000557641 IER5LQ5T953 404 aa12.14□□□□□ -0.47
GABRB3-212ENST00000557641 RSBN1LQ6PCB5 846 aaPredicted RBP12.14□□□□□ -0.47
GABRB3-212ENST00000557641 DHX32Q7L7V1 743 aaKnown RBP12.14□□□□□ -0.47
GABRB3-212ENST00000557641 AMOTL1Q8IY63 956 aa12.14□□□□□ -0.47
GABRB3-212ENST00000557641 AGBL3Q8NEM8 1001 aa12.14□□□□□ -0.47
GABRB3-212ENST00000557641 NCOA7Q8NI08 942 aa12.14□□□□□ -0.47
GABRB3-212ENST00000557641 ZSCAN31Q96LW9 406 aaPredicted RBP12.14□□□□□ -0.47
GABRB3-212ENST00000557641 ZDHHC15Q96MV8 337 aa12.14□□□□□ -0.47
GABRB3-212ENST00000557641 TTC14Q96N46 770 aa12.14□□□□□ -0.47
GABRB3-212ENST00000557641 SYT17Q9BSW7 474 aa12.14□□□□□ -0.47
GABRB3-212ENST00000557641 DAGLAQ9Y4D2 1042 aa12.14□□□□□ -0.47
GABRB3-212ENST00000557641 BRCA1P38398 1863 aaKnown RBP12.13□□□□□ -0.47
GABRB3-212ENST00000557641 SLC3A2P08195 630 aaKnown RBP12.13□□□□□ -0.47
GABRB3-212ENST00000557641 USP5P45974 858 aa12.13□□□□□ -0.47
GABRB3-212ENST00000557641 RALYLQ86SE5 291 aaKnown RBP12.13□□□□□ -0.47
GABRB3-212ENST00000557641 FBXL16Q8N461 479 aa12.13□□□□□ -0.47
GABRB3-212ENST00000557641 SDR42E1Q8WUS8 393 aa12.13□□□□□ -0.47
GABRB3-212ENST00000557641 MTA3Q9BTC8 594 aa12.13□□□□□ -0.47
GABRB3-212ENST00000557641 KRT23Q9C075 422 aa12.13□□□□□ -0.47
GABRB3-212ENST00000557641 DCP1AQ9NPI6 582 aaPredicted RBP12.13□□□□□ -0.47
GABRB3-212ENST00000557641 KCNQ5Q9NR82 932 aa12.13□□□□□ -0.47
GABRB3-212ENST00000557641 HDAC9Q9UKV0 1011 aa12.13□□□□□ -0.47
GABRB3-212ENST00000557641 RPS12P25398 132 aaKnown RBP12.12□□□□□ -0.47
GABRB3-212ENST00000557641 MCM5P33992 734 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 CRKP46108 304 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 RHBDL3P58872 404 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 EXOSC10Q01780 885 aaKnown RBP12.12□□□□□ -0.47
GABRB3-212ENST00000557641 PPARAQ07869 468 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 AKNAD1Q5T1N1 836 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 CIAPIN1Q6FI81 312 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 CTR9Q6PD62 1173 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 MFSD6Q6ZSS7 791 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 STOX1Q6ZVD7 989 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 TEX11Q8IYF3 940 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 OGFOD1Q8N543 542 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 EFCAB3Q8N7B9 438 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 SH3RF3Q8TEJ3 882 aaPredicted RBP12.12□□□□□ -0.47
GABRB3-212ENST00000557641 STAG1Q8WVM7 1258 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 CHMP4CQ96CF2 233 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 GMLQ99445 158 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 MKRN1Q9UHC7 482 aaKnown RBP12.12□□□□□ -0.47
GABRB3-212ENST00000557641 LIMCH1Q9UPQ0 1083 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 CCDC88AQ3V6T2 1871 aa12.12□□□□□ -0.47
GABRB3-212ENST00000557641 MYO5AQ9Y4I1 1855 aaKnown RBP12.11□□□□□ -0.47
GABRB3-212ENST00000557641 USP17L12C9JPN9 530 aa12.11□□□□□ -0.47
GABRB3-212ENST00000557641 USP17L21D6R901 530 aa12.11□□□□□ -0.47
GABRB3-212ENST00000557641 F8W031 263 aaPredicted RBP12.11□□□□□ -0.47
GABRB3-212ENST00000557641 PSMD14O00487 310 aa12.11□□□□□ -0.47
GABRB3-212ENST00000557641 CD2BP2O95400 341 aaKnown RBP12.11□□□□□ -0.47
GABRB3-212ENST00000557641 AK2P54819 239 aa12.11□□□□□ -0.47
GABRB3-212ENST00000557641 EIF6P56537 245 aaKnown RBP12.11□□□□□ -0.47
GABRB3-212ENST00000557641 HAND2P61296 217 aa12.11□□□□□ -0.47
GABRB3-212ENST00000557641 KIAA0825Q8IV33 1275 aa12.11□□□□□ -0.47
GABRB3-212ENST00000557641 ZNF287Q9HBT7 754 aa12.11□□□□□ -0.47
GABRB3-212ENST00000557641 SH2B1Q9NRF2 756 aaPredicted RBP12.11□□□□□ -0.47
GABRB3-212ENST00000557641 TAF6LQ9Y6J9 622 aa12.11□□□□□ -0.47
GABRB3-212ENST00000557641 FZD9O00144 591 aa12.1□□□□□ -0.47
GABRB3-212ENST00000557641 RAD17O75943 681 aa12.1□□□□□ -0.47
GABRB3-212ENST00000557641 HSP90AA1P07900 732 aaKnown RBP12.1□□□□□ -0.47
GABRB3-212ENST00000557641 FGRP09769 529 aa12.1□□□□□ -0.47
GABRB3-212ENST00000557641 SCNN1DP51172 638 aa12.1□□□□□ -0.47
GABRB3-212ENST00000557641 FGD1P98174 961 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms