RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 GTF2IRD1Q9UHL9 959 aa4.01□□□□□ -1.77
PTPN21-209ENST00000557249 B8ZZF3 427 aa4□□□□□ -1.77
PTPN21-209ENST00000557249 FZD6O60353 706 aa4□□□□□ -1.77
PTPN21-209ENST00000557249 LEFTY1O75610 366 aa4□□□□□ -1.77
PTPN21-209ENST00000557249 ABL1P00519 1130 aa4□□□□□ -1.77
PTPN21-209ENST00000557249 NPR3P17342 541 aa4□□□□□ -1.77
PTPN21-209ENST00000557249 KIAA0319Q5VV43 1072 aa4□□□□□ -1.77
PTPN21-209ENST00000557249 PHF6Q8IWS0 365 aaKnown RBP eCLIP4□□□□□ -1.77
PTPN21-209ENST00000557249 TOP6BLQ8N6T0 577 aa4□□□□□ -1.77
PTPN21-209ENST00000557249 LIN37Q96GY3 246 aaPredicted RBP4□□□□□ -1.77
PTPN21-209ENST00000557249 CCDC86Q9H6F5 360 aaKnown RBP4□□□□□ -1.77
PTPN21-209ENST00000557249 PRDM7Q9NQW5 492 aa4□□□□□ -1.77
PTPN21-209ENST00000557249 CCDC87Q9NVE4 849 aa4□□□□□ -1.77
PTPN21-209ENST00000557249 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4□□□□□ -1.77
PTPN21-209ENST00000557249 ZNF503-AS2A6NEH8 195 aa3.99□□□□□ -1.77
PTPN21-209ENST00000557249 PRRG2O14669 202 aa3.99□□□□□ -1.77
PTPN21-209ENST00000557249 ITPKAP23677 461 aa3.99□□□□□ -1.77
PTPN21-209ENST00000557249 ZNF157P51786 506 aaPredicted RBP3.99□□□□□ -1.77
PTPN21-209ENST00000557249 PTPN12Q05209 780 aaKnown RBP3.99□□□□□ -1.77
PTPN21-209ENST00000557249 PPP2R3AQ06190 1150 aa3.99□□□□□ -1.77
PTPN21-209ENST00000557249 TMEM67Q5HYA8 995 aa3.99□□□□□ -1.77
PTPN21-209ENST00000557249 KCNB2Q92953 911 aa3.99□□□□□ -1.77
PTPN21-209ENST00000557249 WDR89Q96FK6 387 aaPredicted RBP3.99□□□□□ -1.77
PTPN21-209ENST00000557249 DISC1Q9NRI5 854 aa3.99□□□□□ -1.77
PTPN21-209ENST00000557249 KRT82Q9NSB4 513 aa3.99□□□□□ -1.77
PTPN21-209ENST00000557249 PLAGL2Q9UPG8 496 aa3.99□□□□□ -1.77
PTPN21-209ENST00000557249 NCANO14594 1321 aa3.98□□□□□ -1.77
PTPN21-209ENST00000557249 GNAT3A8MTJ3 354 aa3.98□□□□□ -1.77
PTPN21-209ENST00000557249 GADD45BO75293 160 aaPredicted RBP3.98□□□□□ -1.77
PTPN21-209ENST00000557249 GLI1P08151 1106 aa3.98□□□□□ -1.77
PTPN21-209ENST00000557249 GSTP1P09211 210 aaKnown RBP3.98□□□□□ -1.77
PTPN21-209ENST00000557249 TMEM253P0C7T8 217 aa3.98□□□□□ -1.77
PTPN21-209ENST00000557249 KIF4BQ2VIQ3 1234 aa3.98□□□□□ -1.77
PTPN21-209ENST00000557249 RPS26P11Q5JNZ5 115 aaPredicted RBP3.98□□□□□ -1.77
PTPN21-209ENST00000557249 CYFIP1Q7L576 1253 aa3.98□□□□□ -1.77
PTPN21-209ENST00000557249 KIRREL1Q96J84 757 aa3.98□□□□□ -1.77
PTPN21-209ENST00000557249 PICK1Q9NRD5 415 aa3.98□□□□□ -1.77
PTPN21-209ENST00000557249 LMCD1Q9NZU5 365 aa3.98□□□□□ -1.77
PTPN21-209ENST00000557249 SERPINA10Q9UK55 444 aa3.98□□□□□ -1.77
PTPN21-209ENST00000557249 BRPF3Q9ULD4 1205 aa3.98□□□□□ -1.77
PTPN21-209ENST00000557249 CTNND2Q9UQB3 1225 aa3.98□□□□□ -1.77
PTPN21-209ENST00000557249 ZNF862O60290 1169 aa3.97□□□□□ -1.77
PTPN21-209ENST00000557249 CPNE3O75131 537 aaKnown RBP3.97□□□□□ -1.77
PTPN21-209ENST00000557249 SSFA2P28290 1259 aa3.97□□□□□ -1.77
PTPN21-209ENST00000557249 PRR23BQ6ZRT6 265 aa3.97□□□□□ -1.77
PTPN21-209ENST00000557249 LCNL1Q6ZST4 164 aa3.97□□□□□ -1.77
PTPN21-209ENST00000557249 FBXO15Q8NCQ5 510 aaPredicted RBP3.97□□□□□ -1.77
PTPN21-209ENST00000557249 KRTAP4-5Q9BYR2 181 aa3.97□□□□□ -1.77
PTPN21-209ENST00000557249 TNKS2Q9H2K2 1166 aa3.97□□□□□ -1.77
PTPN21-209ENST00000557249 NPHS2Q9NP85 383 aa3.97□□□□□ -1.77
PTPN21-209ENST00000557249 ANO2Q9NQ90 1003 aa3.97□□□□□ -1.77
PTPN21-209ENST00000557249 PPP4R2Q9NY27 417 aa3.97□□□□□ -1.77
PTPN21-209ENST00000557249 GPN3Q9UHW5 284 aaPredicted RBP3.97□□□□□ -1.77
PTPN21-209ENST00000557249 TRAK1Q9UPV9 953 aa3.97□□□□□ -1.77
PTPN21-209ENST00000557249 U3KQE9 123 aa3.97□□□□□ -1.77
PTPN21-209ENST00000557249 TMEM238LA0A1B0GVL6 79 aa3.96□□□□□ -1.78
PTPN21-209ENST00000557249 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
PTPN21-209ENST00000557249 IGF2BP3O00425 579 aaKnown RBP eCLIP3.96□□□□□ -1.78
PTPN21-209ENST00000557249 C1QTNF9P0C862 333 aa3.96□□□□□ -1.78
PTPN21-209ENST00000557249 PDE3BQ13370 1112 aa3.96□□□□□ -1.78
PTPN21-209ENST00000557249 ECM1Q16610 540 aa3.96□□□□□ -1.78
PTPN21-209ENST00000557249 USPL1Q5W0Q7 1092 aa3.96□□□□□ -1.78
PTPN21-209ENST00000557249 ISL2Q96A47 359 aa3.96□□□□□ -1.78
PTPN21-209ENST00000557249 CCDC120Q96HB5 630 aa3.96□□□□□ -1.78
PTPN21-209ENST00000557249 RAPGEFL1Q9UHV5 662 aa3.96□□□□□ -1.78
PTPN21-209ENST00000557249 TCAF2A6NFQ2 919 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 NPIPB6E9PJ23 425 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 NDUFB5O43674 189 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 CLCN7P51798 805 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 ZNF211Q13398 564 aaPredicted RBP3.95□□□□□ -1.78
PTPN21-209ENST00000557249 FYB2Q5VWT5 728 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 CIAPIN1Q6FI81 312 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 DTHD1Q6ZMT9 781 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 TTLL10Q6ZVT0 673 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 CDC37L1Q7L3B6 337 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 C1QL4Q86Z23 238 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 CILP2Q8IUL8 1156 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 RNF214Q8ND24 703 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 ACSBG1Q96GR2 724 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 HEXIM2Q96MH2 286 aaKnown RBP3.95□□□□□ -1.78
PTPN21-209ENST00000557249 DIRC2Q96SL1 478 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 NSUN3Q9H649 340 aaKnown RBP3.95□□□□□ -1.78
PTPN21-209ENST00000557249 ABCB6Q9NP58 842 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 PRDM10Q9NQV6 1147 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 TMEM39AQ9NV64 488 aa3.95□□□□□ -1.78
PTPN21-209ENST00000557249 FAM155AB1AL88 458 aaPredicted RBP3.94□□□□□ -1.78
PTPN21-209ENST00000557249 NEFMP07197 916 aa3.94□□□□□ -1.78
PTPN21-209ENST00000557249 RAC2P15153 192 aa3.94□□□□□ -1.78
PTPN21-209ENST00000557249 BUD31P41223 144 aaPredicted RBP3.94□□□□□ -1.78
PTPN21-209ENST00000557249 CTSWP56202 376 aa3.94□□□□□ -1.78
PTPN21-209ENST00000557249 ERVK-24P63145 666 aa3.94□□□□□ -1.78
PTPN21-209ENST00000557249 PRPF40BQ6NWY9 871 aaKnown RBP3.94□□□□□ -1.78
PTPN21-209ENST00000557249 SPACA3Q8IXA5 215 aa3.94□□□□□ -1.78
PTPN21-209ENST00000557249 TMC1Q8TDI8 760 aa3.94□□□□□ -1.78
PTPN21-209ENST00000557249 EMILIN2Q9BXX0 1053 aa3.94□□□□□ -1.78
PTPN21-209ENST00000557249 FOXQ1Q9C009 403 aa3.94□□□□□ -1.78
PTPN21-209ENST00000557249 CARS2Q9HA77 564 aaKnown RBP3.94□□□□□ -1.78
PTPN21-209ENST00000557249 PCDHGC5Q9Y5F6 944 aa3.94□□□□□ -1.78
PTPN21-209ENST00000557249 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.93□□□□□ -1.78
PTPN21-209ENST00000557249 INHBBP09529 407 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms