RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 SIRT2Q8IXJ6 389 aa14.56□□□□□ -0.08
SYNE2-226ENST00000557084 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.56□□□□□ -0.08
SYNE2-226ENST00000557084 ZKSCAN4Q969J2 545 aaPredicted RBP14.56□□□□□ -0.08
SYNE2-226ENST00000557084 OTUD5Q96G74 571 aa14.56□□□□□ -0.08
SYNE2-226ENST00000557084 IDI2Q9BXS1 227 aa14.56□□□□□ -0.08
SYNE2-226ENST00000557084 IDH1O75874 414 aaKnown RBP14.55□□□□□ -0.08
SYNE2-226ENST00000557084 TBC1D8O95759 1140 aa14.55□□□□□ -0.08
SYNE2-226ENST00000557084 CYP2E1P05181 493 aaPredicted RBP14.55□□□□□ -0.08
SYNE2-226ENST00000557084 PLCG2P16885 1265 aa14.55□□□□□ -0.08
SYNE2-226ENST00000557084 TEX11Q8IYF3 940 aa14.55□□□□□ -0.08
SYNE2-226ENST00000557084 WDHD1O75717 1129 aaPredicted RBP14.54□□□□□ -0.08
SYNE2-226ENST00000557084 GTF2A2P52657 109 aa14.54□□□□□ -0.08
SYNE2-226ENST00000557084 ERO1BQ86YB8 467 aa14.54□□□□□ -0.08
SYNE2-226ENST00000557084 IFNL1Q8IU54 200 aa14.54□□□□□ -0.08
SYNE2-226ENST00000557084 ZFPM1Q8IX07 1006 aa14.54□□□□□ -0.08
SYNE2-226ENST00000557084 AKAP11Q9UKA4 1901 aa14.54□□□□□ -0.08
SYNE2-226ENST00000557084 MYH2Q9UKX2 1941 aa14.54□□□□□ -0.08
SYNE2-226ENST00000557084 AK9Q5TCS8 1911 aa14.53□□□□□ -0.08
SYNE2-226ENST00000557084 IGSF3O75054 1194 aa14.53□□□□□ -0.08
SYNE2-226ENST00000557084 GJA5P36382 358 aa14.53□□□□□ -0.08
SYNE2-226ENST00000557084 RRP1P56182 461 aaKnown RBP14.53□□□□□ -0.08
SYNE2-226ENST00000557084 RHBDL3P58872 404 aa14.53□□□□□ -0.08
SYNE2-226ENST00000557084 MAP3K12Q12852 859 aa14.53□□□□□ -0.08
SYNE2-226ENST00000557084 MKRN4PQ13434 485 aaPredicted RBP14.53□□□□□ -0.08
SYNE2-226ENST00000557084 DGKZQ13574 1117 aa14.53□□□□□ -0.08
SYNE2-226ENST00000557084 ZNF384Q8TF68 577 aa14.53□□□□□ -0.08
SYNE2-226ENST00000557084 PIH1D3Q9NQM4 214 aaKnown RBP14.53□□□□□ -0.08
SYNE2-226ENST00000557084 AATFQ9NY61 560 aaKnown RBP eCLIP14.53□□□□□ -0.08
SYNE2-226ENST00000557084 CCL15-CCL14A0A0B4J2E2 113 aa14.52□□□□□ -0.09
SYNE2-226ENST00000557084 SPDYE5A6NIY4 337 aa14.52□□□□□ -0.09
SYNE2-226ENST00000557084 CYP7A1P22680 504 aa14.52□□□□□ -0.09
SYNE2-226ENST00000557084 INPP5BP32019 993 aa14.52□□□□□ -0.09
SYNE2-226ENST00000557084 SNAPC2Q13487 334 aa14.52□□□□□ -0.09
SYNE2-226ENST00000557084 TTF1Q15361 905 aaPredicted RBP14.52□□□□□ -0.09
SYNE2-226ENST00000557084 CCL15Q16663 113 aa14.52□□□□□ -0.09
SYNE2-226ENST00000557084 SH3RF3Q8TEJ3 882 aaPredicted RBP14.52□□□□□ -0.09
SYNE2-226ENST00000557084 LRRCC1Q9C099 1032 aa14.52□□□□□ -0.09
SYNE2-226ENST00000557084 DDX4Q9NQI0 724 aaKnown RBP14.52□□□□□ -0.09
SYNE2-226ENST00000557084 PICK1Q9NRD5 415 aa14.52□□□□□ -0.09
SYNE2-226ENST00000557084 SNCAIPQ9Y6H5 919 aa14.52□□□□□ -0.09
SYNE2-226ENST00000557084 NDUFB9Q9Y6M9 179 aa14.52□□□□□ -0.09
SYNE2-226ENST00000557084 CASP8AP2Q9UKL3 1982 aa14.52□□□□□ -0.09
SYNE2-226ENST00000557084 DDTLA6NHG4 134 aaPredicted RBP14.51□□□□□ -0.09
SYNE2-226ENST00000557084 IGF2BP3O00425 579 aaKnown RBP eCLIP14.51□□□□□ -0.09
SYNE2-226ENST00000557084 CETPP11597 493 aa14.51□□□□□ -0.09
SYNE2-226ENST00000557084 MAGEB6Q8N7X4 407 aa14.51□□□□□ -0.09
SYNE2-226ENST00000557084 DNAJC2Q99543 621 aaKnown RBP14.51□□□□□ -0.09
SYNE2-226ENST00000557084 GPR25O00155 361 aa14.5□□□□□ -0.09
SYNE2-226ENST00000557084 PPATQ06203 517 aa14.5□□□□□ -0.09
SYNE2-226ENST00000557084 PPIL2Q13356 520 aa14.5□□□□□ -0.09
SYNE2-226ENST00000557084 CERS3Q8IU89 383 aa14.5□□□□□ -0.09
SYNE2-226ENST00000557084 TGFBRAP1Q8WUH2 860 aa14.5□□□□□ -0.09
SYNE2-226ENST00000557084 ZNF296Q8WUU4 475 aaPredicted RBP14.5□□□□□ -0.09
SYNE2-226ENST00000557084 ABHD8Q96I13 439 aa14.5□□□□□ -0.09
SYNE2-226ENST00000557084 TRIM34Q9BYJ4 488 aa14.5□□□□□ -0.09
SYNE2-226ENST00000557084 MCOLN1Q9GZU1 580 aa14.5□□□□□ -0.09
SYNE2-226ENST00000557084 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.5□□□□□ -0.09
SYNE2-226ENST00000557084 ZNF112Q9UJU3 913 aa14.5□□□□□ -0.09
SYNE2-226ENST00000557084 GOLIM4O00461 696 aa14.49□□□□□ -0.09
SYNE2-226ENST00000557084 IRF6O14896 467 aa14.49□□□□□ -0.09
SYNE2-226ENST00000557084 FKTNO75072 461 aa14.49□□□□□ -0.09
SYNE2-226ENST00000557084 PPP4CP60510 307 aa14.49□□□□□ -0.09
SYNE2-226ENST00000557084 TMED8Q6PL24 325 aaPredicted RBP14.49□□□□□ -0.09
SYNE2-226ENST00000557084 SH3BP5LQ7L8J4 393 aa14.49□□□□□ -0.09
SYNE2-226ENST00000557084 ADGRA1Q86SQ6 560 aa14.49□□□□□ -0.09
SYNE2-226ENST00000557084 MAPKAPK5Q8IW41 473 aa14.49□□□□□ -0.09
SYNE2-226ENST00000557084 MIGA1Q8NAN2 632 aa14.49□□□□□ -0.09
SYNE2-226ENST00000557084 BRI3BPQ8WY22 251 aa14.49□□□□□ -0.09
SYNE2-226ENST00000557084 GPATCH3Q96I76 525 aa14.49□□□□□ -0.09
SYNE2-226ENST00000557084 MS4A4AQ96JQ5 239 aa14.49□□□□□ -0.09
SYNE2-226ENST00000557084 CFHR5Q9BXR6 569 aa14.49□□□□□ -0.09
SYNE2-226ENST00000557084 OSBPL5Q9H0X9 879 aaPredicted RBP14.49□□□□□ -0.09
SYNE2-226ENST00000557084 ANTXR1Q9H6X2 564 aa14.49□□□□□ -0.09
SYNE2-226ENST00000557084 RFX7Q2KHR2 1363 aa14.48□□□□□ -0.09
SYNE2-226ENST00000557084 TESPA1A2RU30 521 aaPredicted RBP14.48□□□□□ -0.09
SYNE2-226ENST00000557084 SMARCA5O60264 1052 aaPredicted RBP14.48□□□□□ -0.09
SYNE2-226ENST00000557084 CTNND1O60716 968 aaKnown RBP14.48□□□□□ -0.09
SYNE2-226ENST00000557084 CRHR2Q13324 411 aa14.48□□□□□ -0.09
SYNE2-226ENST00000557084 TAF1CQ15572 869 aaPredicted RBP14.48□□□□□ -0.09
SYNE2-226ENST00000557084 NOM1Q5C9Z4 860 aaKnown RBP14.48□□□□□ -0.09
SYNE2-226ENST00000557084 NOL9Q5SY16 702 aaKnown RBP14.48□□□□□ -0.09
SYNE2-226ENST00000557084 CTU1Q7Z7A3 348 aaKnown RBP14.48□□□□□ -0.09
SYNE2-226ENST00000557084 SCYL3Q8IZE3 742 aa14.48□□□□□ -0.09
SYNE2-226ENST00000557084 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.48□□□□□ -0.09
SYNE2-226ENST00000557084 PTPN18Q99952 460 aa14.48□□□□□ -0.09
SYNE2-226ENST00000557084 DHX36Q9H2U1 1008 aaKnown RBP14.48□□□□□ -0.09
SYNE2-226ENST00000557084 ZFYVE28Q9HCC9 887 aa14.48□□□□□ -0.09
SYNE2-226ENST00000557084 ZBTB47Q9UFB7 747 aaPredicted RBP14.48□□□□□ -0.09
SYNE2-226ENST00000557084 CCDC85CA6NKD9 419 aa14.47□□□□□ -0.09
SYNE2-226ENST00000557084 PHF20L1A8MW92 1017 aa14.47□□□□□ -0.09
SYNE2-226ENST00000557084 TBC1D12O60347 775 aa14.47□□□□□ -0.09
SYNE2-226ENST00000557084 USP5P45974 858 aa14.47□□□□□ -0.09
SYNE2-226ENST00000557084 SLC9C2Q5TAH2 1124 aa14.47□□□□□ -0.09
SYNE2-226ENST00000557084 CRACR2BQ8N4Y2 399 aaPredicted RBP14.47□□□□□ -0.09
SYNE2-226ENST00000557084 BOLA2Q9H3K6 86 aa14.47□□□□□ -0.09
SYNE2-226ENST00000557084 R3HDMLQ9H3Y0 253 aa14.47□□□□□ -0.09
SYNE2-226ENST00000557084 DCTPP1Q9H773 170 aa14.47□□□□□ -0.09
SYNE2-226ENST00000557084 PAG1Q9NWQ8 432 aa14.47□□□□□ -0.09
SYNE2-226ENST00000557084 PI4KBQ9UBF8 816 aa14.47□□□□□ -0.09
SYNE2-226ENST00000557084 ZHX2Q9Y6X8 837 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms