RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 COL19A1Q14993 1142 aa7.33□□□□□ -1.24
SRP54-211ENST00000556445 AKAP4Q5JQC9 854 aa7.33□□□□□ -1.24
SRP54-211ENST00000556445 FBLIM1Q8WUP2 373 aa7.33□□□□□ -1.24
SRP54-211ENST00000556445 EZH1Q92800 747 aaPredicted RBP7.33□□□□□ -1.24
SRP54-211ENST00000556445 WDR89Q96FK6 387 aaPredicted RBP7.33□□□□□ -1.24
SRP54-211ENST00000556445 IGSF5Q9NSI5 407 aa7.33□□□□□ -1.24
SRP54-211ENST00000556445 FYCO1Q9BQS8 1478 aa7.32□□□□□ -1.24
SRP54-211ENST00000556445 HYAL3O43820 417 aaPredicted RBP7.32□□□□□ -1.24
SRP54-211ENST00000556445 LIG1P18858 919 aa7.32□□□□□ -1.24
SRP54-211ENST00000556445 USP11P51784 963 aa7.32□□□□□ -1.24
SRP54-211ENST00000556445 DNAJC14Q6Y2X3 702 aaPredicted RBP7.32□□□□□ -1.24
SRP54-211ENST00000556445 SULF2Q8IWU5 870 aa7.32□□□□□ -1.24
SRP54-211ENST00000556445 ANKRD24Q8TF21 1146 aa7.32□□□□□ -1.24
SRP54-211ENST00000556445 NECAB3Q96P71 396 aaPredicted RBP7.32□□□□□ -1.24
SRP54-211ENST00000556445 ZC3H12CQ9C0D7 883 aaKnown RBP7.32□□□□□ -1.24
SRP54-211ENST00000556445 C12orf49Q9H741 205 aa7.32□□□□□ -1.24
SRP54-211ENST00000556445 ZFP64Q9NPA5 681 aa7.32□□□□□ -1.24
SRP54-211ENST00000556445 RAD18Q9NS91 495 aa7.32□□□□□ -1.24
SRP54-211ENST00000556445 KRT82Q9NSB4 513 aa7.32□□□□□ -1.24
SRP54-211ENST00000556445 FAM105AQ9NUU6 356 aa7.32□□□□□ -1.24
SRP54-211ENST00000556445 PPP1R9AQ9ULJ8 1098 aa7.32□□□□□ -1.24
SRP54-211ENST00000556445 PPM1HQ9ULR3 514 aa7.32□□□□□ -1.24
SRP54-211ENST00000556445 SPG7Q9UQ90 795 aa7.32□□□□□ -1.24
SRP54-211ENST00000556445 FAM95CA0A1B0GW59 222 aa7.31□□□□□ -1.24
SRP54-211ENST00000556445 PRR19A6NJB7 356 aa7.31□□□□□ -1.24
SRP54-211ENST00000556445 EIF4G3O43432 1585 aaKnown RBP7.31□□□□□ -1.24
SRP54-211ENST00000556445 TGFB1P01137 390 aa7.31□□□□□ -1.24
SRP54-211ENST00000556445 RXRBP28702 533 aa7.31□□□□□ -1.24
SRP54-211ENST00000556445 IQGAP2Q13576 1575 aa7.31□□□□□ -1.24
SRP54-211ENST00000556445 CCDC27Q2M243 656 aa7.31□□□□□ -1.24
SRP54-211ENST00000556445 SAMD9Q5K651 1589 aa7.31□□□□□ -1.24
SRP54-211ENST00000556445 DYMQ7RTS9 669 aa7.31□□□□□ -1.24
SRP54-211ENST00000556445 NPAS4Q8IUM7 802 aa7.31□□□□□ -1.24
SRP54-211ENST00000556445 SHKBP1Q8TBC3 707 aa7.31□□□□□ -1.24
SRP54-211ENST00000556445 CASKIN1Q8WXD9 1431 aa7.31□□□□□ -1.24
SRP54-211ENST00000556445 ACSS3Q9H6R3 686 aa7.31□□□□□ -1.24
SRP54-211ENST00000556445 AP4E1Q9UPM8 1137 aa7.31□□□□□ -1.24
SRP54-211ENST00000556445 PCDHGC5Q9Y5F6 944 aa7.31□□□□□ -1.24
SRP54-211ENST00000556445 TIAM1Q13009 1591 aa7.3□□□□□ -1.24
SRP54-211ENST00000556445 ENC1O14682 589 aa7.3□□□□□ -1.24
SRP54-211ENST00000556445 TMPRSS2O15393 492 aa7.3□□□□□ -1.24
SRP54-211ENST00000556445 PRPF40AO75400 957 aaKnown RBP7.3□□□□□ -1.24
SRP54-211ENST00000556445 NME2P22392 152 aa7.3□□□□□ -1.24
SRP54-211ENST00000556445 ARNTP27540 789 aa7.3□□□□□ -1.24
SRP54-211ENST00000556445 KIF4BQ2VIQ3 1234 aa7.3□□□□□ -1.24
SRP54-211ENST00000556445 TPTE2Q6XPS3 522 aa7.3□□□□□ -1.24
SRP54-211ENST00000556445 MFSD14AQ96MC6 490 aa7.3□□□□□ -1.24
SRP54-211ENST00000556445 RNF19AQ9NV58 838 aa7.3□□□□□ -1.24
SRP54-211ENST00000556445 KIAA0586Q9BVV6 1533 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.29□□□□□ -1.24
SRP54-211ENST00000556445 FBXO24O75426 580 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 PAGE1O75459 146 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 MED26O95402 600 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 USP17L7P0C7H9 530 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 GNA15P30679 374 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 CD97P48960 835 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 ZNF252P-AS1Q0IIN9 211 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 PAOXQ6QHF9 649 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 SHISA5Q8N114 240 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 FRMD6Q96NE9 622 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 CEP44Q9C0F1 390 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 SEMA6CQ9H3T2 930 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 CACNA2D2Q9NY47 1150 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 CRIM1Q9NZV1 1036 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 FAM8A1Q9UBU6 413 aa7.29□□□□□ -1.24
SRP54-211ENST00000556445 CFAP43Q8NDM7 1665 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 FHOD3Q2V2M9 1422 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 ZNF608Q9ULD9 1512 aaPredicted RBP7.28□□□□□ -1.24
SRP54-211ENST00000556445 UNCXA6NJT0 531 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 F13BP05160 661 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 NFICP08651 508 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 RAB6AP20340 208 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 BMP6P22004 513 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 ADMP35318 185 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 ASPAP45381 313 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 NFKBIBQ15653 356 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 EAPPQ56P03 285 aaPredicted RBP7.28□□□□□ -1.24
SRP54-211ENST00000556445 GATA6Q92908 595 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 KCNB2Q92953 911 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 DUSP9Q99956 384 aaKnown RBP7.28□□□□□ -1.24
SRP54-211ENST00000556445 YIPF2Q9BWQ6 316 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 PRKAG2Q9UGJ0 569 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 SYNJ2O15056 1496 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 GRIN2AQ12879 1464 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 SNAPC4Q5SXM2 1469 aa7.28□□□□□ -1.24
SRP54-211ENST00000556445 UGGT2Q9NYU1 1516 aa7.27□□□□□ -1.25
SRP54-211ENST00000556445 WDR64B1ANS9 1081 aa7.27□□□□□ -1.25
SRP54-211ENST00000556445 SSTR4P31391 388 aa7.27□□□□□ -1.25
SRP54-211ENST00000556445 ID3Q02535 119 aa7.27□□□□□ -1.25
SRP54-211ENST00000556445 RASIP1Q5U651 963 aa7.27□□□□□ -1.25
SRP54-211ENST00000556445 SEZ6L2Q6UXD5 910 aa7.27□□□□□ -1.25
SRP54-211ENST00000556445 EMILIN2Q9BXX0 1053 aa7.27□□□□□ -1.25
SRP54-211ENST00000556445 DISC1Q9NRI5 854 aa7.27□□□□□ -1.25
SRP54-211ENST00000556445 LRRC9Q6ZRR7 1453 aa7.27□□□□□ -1.25
SRP54-211ENST00000556445 PCF11O94913 1555 aaKnown RBP7.27□□□□□ -1.25
SRP54-211ENST00000556445 RRBP1Q9P2E9 1410 aaKnown RBP7.27□□□□□ -1.25
SRP54-211ENST00000556445 KIAA1324LA8MWY0 1029 aaPredicted RBP7.26□□□□□ -1.25
SRP54-211ENST00000556445 COBLO75128 1261 aa7.26□□□□□ -1.25
SRP54-211ENST00000556445 CELA3AP09093 270 aa7.26□□□□□ -1.25
SRP54-211ENST00000556445 SLFN14P0C7P3 912 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms