RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 MBD4O95243 580 aa9.12□□□□□ -0.95
PCNX4-211ENST00000555929 VEGFAP15692 232 aaPredicted RBP9.12□□□□□ -0.95
PCNX4-211ENST00000555929 CACNB3P54284 484 aa9.12□□□□□ -0.95
PCNX4-211ENST00000555929 ZNF280AP59817 542 aaPredicted RBP9.12□□□□□ -0.95
PCNX4-211ENST00000555929 HDLBPQ00341 1268 aaKnown RBP9.12□□□□□ -0.95
PCNX4-211ENST00000555929 UBE3CQ15386 1083 aa9.12□□□□□ -0.95
PCNX4-211ENST00000555929 CCDC129Q6ZRS4 1044 aa9.12□□□□□ -0.95
PCNX4-211ENST00000555929 OSBP2Q969R2 916 aa9.12□□□□□ -0.95
PCNX4-211ENST00000555929 PRMT6Q96LA8 375 aaPredicted RBP9.12□□□□□ -0.95
PCNX4-211ENST00000555929 MRIQ9BWK5 157 aa9.12□□□□□ -0.95
PCNX4-211ENST00000555929 PUS7LQ9H0K6 701 aaKnown RBP9.12□□□□□ -0.95
PCNX4-211ENST00000555929 ARMT1Q9H993 441 aa9.12□□□□□ -0.95
PCNX4-211ENST00000555929 TMOD2Q9NZR1 351 aa9.12□□□□□ -0.95
PCNX4-211ENST00000555929 SCAF8Q9UPN6 1271 aaKnown RBP9.12□□□□□ -0.95
PCNX4-211ENST00000555929 GPR75-ASB3A0A0A6YYF3 556 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 A0A0D9SFI3 127 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 TCRBV5S4A2TA0A5A2 114 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 POTECB2RU33 542 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 TCP10L2B9ZVM9 353 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 M0R2C6 588 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 WNT10BO00744 389 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 CDC45O75419 566 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 APPP05067 770 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 CHMLP26374 656 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 USP5P45974 858 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 MMP14P50281 582 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 HIRAP54198 1017 aaPredicted RBP9.11□□□□□ -0.95
PCNX4-211ENST00000555929 PICALMQ13492 652 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 MCMDC2Q4G0Z9 681 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 ZMYM1Q5SVZ6 1142 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 APOBEC3HQ6NTF7 200 aaKnown RBP9.11□□□□□ -0.95
PCNX4-211ENST00000555929 CDC42EP5Q6NZY7 148 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 TEX11Q8IYF3 940 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 LCORLQ8N3X6 602 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 SH3RF3Q8TEJ3 882 aaPredicted RBP9.11□□□□□ -0.95
PCNX4-211ENST00000555929 RUFY2Q8WXA3 655 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 APPBP2Q92624 585 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 MS4A4AQ96JQ5 239 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 ZDHHC15Q96MV8 337 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 TAF1DQ9H5J8 278 aaPredicted RBP9.11□□□□□ -0.95
PCNX4-211ENST00000555929 HELLSQ9NRZ9 838 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 ZNF70Q9UC06 446 aaPredicted RBP9.11□□□□□ -0.95
PCNX4-211ENST00000555929 STK24Q9Y6E0 443 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 SBF1O95248 1867 aa9.11□□□□□ -0.95
PCNX4-211ENST00000555929 ASTN2O75129 1339 aaPredicted RBP9.1□□□□□ -0.95
PCNX4-211ENST00000555929 SCN9AQ15858 1988 aa9.1□□□□□ -0.95
PCNX4-211ENST00000555929 CHD4Q14839 1912 aa9.1□□□□□ -0.95
PCNX4-211ENST00000555929 PRKAB2O43741 272 aa9.1□□□□□ -0.95
PCNX4-211ENST00000555929 IGSF3O75054 1194 aa9.1□□□□□ -0.95
PCNX4-211ENST00000555929 ANGEL2Q5VTE6 544 aaKnown RBP9.1□□□□□ -0.95
PCNX4-211ENST00000555929 USP50Q70EL3 339 aaPredicted RBP9.1□□□□□ -0.95
PCNX4-211ENST00000555929 PNMA8AQ86V59 439 aaPredicted RBP9.1□□□□□ -0.95
PCNX4-211ENST00000555929 TGFBRAP1Q8WUH2 860 aa9.1□□□□□ -0.95
PCNX4-211ENST00000555929 DCPSQ96C86 337 aaKnown RBP9.1□□□□□ -0.95
PCNX4-211ENST00000555929 CRNKL1Q9BZJ0 848 aaKnown RBP9.1□□□□□ -0.95
PCNX4-211ENST00000555929 SLC4A4Q9Y6R1 1079 aa9.1□□□□□ -0.95
PCNX4-211ENST00000555929 CCDC88AQ3V6T2 1871 aa9.1□□□□□ -0.95
PCNX4-211ENST00000555929 GAKO14976 1311 aa9.09□□□□□ -0.95
PCNX4-211ENST00000555929 TIAM2Q8IVF5 1701 aa9.09□□□□□ -0.95
PCNX4-211ENST00000555929 POTEB3A0JP26 581 aa9.09□□□□□ -0.95
PCNX4-211ENST00000555929 GPAA1O43292 621 aa9.09□□□□□ -0.95
PCNX4-211ENST00000555929 MFAP1P55081 439 aaKnown RBP9.09□□□□□ -0.95
PCNX4-211ENST00000555929 TCP10Q12799 353 aa9.09□□□□□ -0.95
PCNX4-211ENST00000555929 SLC4A8Q2Y0W8 1093 aa9.09□□□□□ -0.95
PCNX4-211ENST00000555929 TMED8Q6PL24 325 aaPredicted RBP9.09□□□□□ -0.95
PCNX4-211ENST00000555929 POTEBQ6S5H4 581 aa9.09□□□□□ -0.95
PCNX4-211ENST00000555929 MAPKAPK5Q8IW41 473 aa9.09□□□□□ -0.95
PCNX4-211ENST00000555929 ZSCAN29Q8IWY8 852 aaPredicted RBP9.09□□□□□ -0.95
PCNX4-211ENST00000555929 MTMR14Q8NCE2 650 aa9.09□□□□□ -0.95
PCNX4-211ENST00000555929 RIOK1Q9BRS2 568 aaKnown RBP9.09□□□□□ -0.95
PCNX4-211ENST00000555929 ZSWIM6Q9HCJ5 1215 aa9.09□□□□□ -0.95
PCNX4-211ENST00000555929 GGA3Q9NZ52 723 aa9.09□□□□□ -0.95
PCNX4-211ENST00000555929 STK25O00506 426 aa9.08□□□□□ -0.96
PCNX4-211ENST00000555929 ECM2O94769 699 aaPredicted RBP9.08□□□□□ -0.96
PCNX4-211ENST00000555929 RHBDL3P58872 404 aa9.08□□□□□ -0.96
PCNX4-211ENST00000555929 PPP4CP60510 307 aa9.08□□□□□ -0.96
PCNX4-211ENST00000555929 NFIAQ12857 509 aa9.08□□□□□ -0.96
PCNX4-211ENST00000555929 MAP1SQ66K74 1059 aaPredicted RBP9.08□□□□□ -0.96
PCNX4-211ENST00000555929 KIAA1211Q6ZU35 1233 aa9.08□□□□□ -0.96
PCNX4-211ENST00000555929 ZNF589Q86UQ0 364 aaPredicted RBP9.08□□□□□ -0.96
PCNX4-211ENST00000555929 USP48Q86UV5 1035 aa9.08□□□□□ -0.96
PCNX4-211ENST00000555929 CERS3Q8IU89 383 aa9.08□□□□□ -0.96
PCNX4-211ENST00000555929 SDR42E1Q8WUS8 393 aa9.08□□□□□ -0.96
PCNX4-211ENST00000555929 DDRGK1Q96HY6 314 aa9.08□□□□□ -0.96
PCNX4-211ENST00000555929 ZBED3Q96IU2 234 aaPredicted RBP9.08□□□□□ -0.96
PCNX4-211ENST00000555929 STRBPQ96SI9 672 aaKnown RBP9.08□□□□□ -0.96
PCNX4-211ENST00000555929 KRTAP3-3Q9BYR6 98 aa9.08□□□□□ -0.96
PCNX4-211ENST00000555929 KRTAP3-2Q9BYR7 98 aa9.08□□□□□ -0.96
PCNX4-211ENST00000555929 SAP30BPQ9UHR5 308 aaKnown RBP9.08□□□□□ -0.96
PCNX4-211ENST00000555929 CCDC171Q6TFL3 1326 aa9.07□□□□□ -0.96
PCNX4-211ENST00000555929 AKAP11Q9UKA4 1901 aa9.07□□□□□ -0.96
PCNX4-211ENST00000555929 PATL2C9JE40 543 aaKnown RBP9.07□□□□□ -0.96
PCNX4-211ENST00000555929 POLR3DP05423 398 aaPredicted RBP9.07□□□□□ -0.96
PCNX4-211ENST00000555929 GNAT2P19087 354 aa9.07□□□□□ -0.96
PCNX4-211ENST00000555929 TDO2P48775 406 aa9.07□□□□□ -0.96
PCNX4-211ENST00000555929 TNNI2P48788 182 aa9.07□□□□□ -0.96
PCNX4-211ENST00000555929 TNFAIP1Q13829 316 aa9.07□□□□□ -0.96
PCNX4-211ENST00000555929 VPS53Q5VIR6 699 aa9.07□□□□□ -0.96
PCNX4-211ENST00000555929 PRAMEF18Q5VWM3 479 aa9.07□□□□□ -0.96
PCNX4-211ENST00000555929 DLK2Q6UY11 383 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms