RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 PARP10Q53GL7 1025 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 RC3H1Q5TC82 1133 aaKnown RBP9.36□□□□□ -0.91
LINC00641-202ENST00000555688 CLEC4GQ6UXB4 293 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 LDHAL6AQ6ZMR3 332 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 ZNF589Q86UQ0 364 aaPredicted RBP9.36□□□□□ -0.91
LINC00641-202ENST00000555688 KBTBD3Q8NAB2 608 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 XAGE2Q96GT9 111 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 UTP14AQ9BVJ6 771 aaKnown RBP9.36□□□□□ -0.91
LINC00641-202ENST00000555688 AKAP2Q9Y2D5 859 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 SH3TC1Q8TE82 1336 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 BCORQ6W2J9 1755 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 USP17L3A6NCW0 530 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 USP17L4A6NCW7 530 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 PDIA4P13667 645 aaKnown RBP9.35□□□□□ -0.91
LINC00641-202ENST00000555688 MCM2P49736 904 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 MYT1Q01538 1121 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 TAF7LQ5H9L4 462 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 MEX3CQ5U5Q3 659 aaKnown RBP9.35□□□□□ -0.91
LINC00641-202ENST00000555688 RNF20Q5VTR2 975 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 USP17L2Q6R6M4 530 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 LIAT1Q6ZQX7 453 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 DDX46Q7L014 1031 aaKnown RBP9.35□□□□□ -0.91
LINC00641-202ENST00000555688 USP17L1Q7RTZ2 530 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 TICAM2Q86XR7 235 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 PLPP7Q8NBV4 271 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 RETREG2Q8NC44 543 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 TMX3Q96JJ7 454 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 TTC14Q96N46 770 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 DNAJC2Q99543 621 aaKnown RBP9.35□□□□□ -0.91
LINC00641-202ENST00000555688 UPF3BQ9BZI7 483 aaKnown RBP9.35□□□□□ -0.91
LINC00641-202ENST00000555688 VRTNQ9H8Y1 702 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 NIP7Q9Y221 180 aaKnown RBP eCLIP9.35□□□□□ -0.91
LINC00641-202ENST00000555688 DDX60Q8IY21 1712 aaKnown RBP9.35□□□□□ -0.91
LINC00641-202ENST00000555688 SBF2Q86WG5 1849 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 TAF5LO75529 589 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 HSP90AA1P07900 732 aaKnown RBP9.35□□□□□ -0.91
LINC00641-202ENST00000555688 CUL4AQ13619 759 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 PRPF40BQ6NWY9 871 aaKnown RBP9.35□□□□□ -0.91
LINC00641-202ENST00000555688 SMIM5Q71RC9 77 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 CCDC125Q86Z20 511 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 ZGPATQ8N5A5 531 aaKnown RBP9.35□□□□□ -0.91
LINC00641-202ENST00000555688 PAG1Q9NWQ8 432 aa9.35□□□□□ -0.91
LINC00641-202ENST00000555688 RBM8AQ9Y5S9 174 aaKnown RBP9.35□□□□□ -0.91
LINC00641-202ENST00000555688 LRP5O75197 1615 aa9.34□□□□□ -0.91
LINC00641-202ENST00000555688 FAM177BA6PVY3 158 aa9.34□□□□□ -0.91
LINC00641-202ENST00000555688 ESPNB1AK53 854 aa9.34□□□□□ -0.91
LINC00641-202ENST00000555688 GOLIM4O00461 696 aa9.34□□□□□ -0.91
LINC00641-202ENST00000555688 RPS6KA4O75676 772 aa9.34□□□□□ -0.91
LINC00641-202ENST00000555688 ATG7O95352 703 aa9.34□□□□□ -0.91
LINC00641-202ENST00000555688 IFIT1P09914 478 aaKnown RBP9.34□□□□□ -0.91
LINC00641-202ENST00000555688 MCM4P33991 863 aa9.34□□□□□ -0.91
LINC00641-202ENST00000555688 ADCK5Q3MIX3 580 aa9.34□□□□□ -0.91
LINC00641-202ENST00000555688 USPL1Q5W0Q7 1092 aa9.34□□□□□ -0.91
LINC00641-202ENST00000555688 CREB3L3Q68CJ9 461 aa9.34□□□□□ -0.91
LINC00641-202ENST00000555688 TRAF7Q6Q0C0 670 aa9.34□□□□□ -0.91
LINC00641-202ENST00000555688 SEPT12Q8IYM1 358 aa9.34□□□□□ -0.91
LINC00641-202ENST00000555688 TNPO1Q92973 898 aaKnown RBP9.34□□□□□ -0.91
LINC00641-202ENST00000555688 EMID1Q96A84 441 aaPredicted RBP9.34□□□□□ -0.91
LINC00641-202ENST00000555688 SEC62Q99442 399 aaKnown RBP9.34□□□□□ -0.91
LINC00641-202ENST00000555688 TM6SF1Q9BZW5 370 aa9.34□□□□□ -0.91
LINC00641-202ENST00000555688 TRPC5Q9UL62 973 aaPredicted RBP9.34□□□□□ -0.91
LINC00641-202ENST00000555688 RTL9Q8NET4 1388 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 SLC27A2O14975 620 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 PDE8BO95263 885 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 CYP2E1P05181 493 aaPredicted RBP9.33□□□□□ -0.92
LINC00641-202ENST00000555688 FGFR2P21802 821 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 PDE4CQ08493 712 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 SCARF1Q14162 830 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 ATP2B3Q16720 1220 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 TSGA10IPQ3SY00 556 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 MCMDC2Q4G0Z9 681 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 METTL24Q5JXM2 366 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 AMIGO3Q86WK7 504 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 TRAIPQ9BWF2 469 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 CWC22Q9HCG8 908 aaKnown RBP9.33□□□□□ -0.92
LINC00641-202ENST00000555688 SEC31BQ9NQW1 1179 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 CNNM1Q9NRU3 951 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 MAP4K5Q9Y4K4 846 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 AKAP11Q9UKA4 1901 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 SPEF2Q9C093 1822 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 LY75O60449 1722 aa9.33□□□□□ -0.92
LINC00641-202ENST00000555688 COL9A3Q14050 684 aaPredicted RBP9.32□□□□□ -0.92
LINC00641-202ENST00000555688 CCDC158Q5M9N0 1113 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 ZMYM1Q5SVZ6 1142 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 CCDC129Q6ZRS4 1044 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 CLEC17AQ6ZS10 378 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 ZNF512BQ96KM6 892 aaPredicted RBP9.32□□□□□ -0.92
LINC00641-202ENST00000555688 NARFQ9UHQ1 456 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 ZNF652Q9Y2D9 606 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 TAF6LQ9Y6J9 622 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 TAF1LQ8IZX4 1826 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 LAMB2P55268 1798 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 CPA1P15085 419 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 SSFA2P28290 1259 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 SLC19A1P41440 591 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 AK2P54819 239 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 NCOA4Q13772 614 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 TTC39AQ5SRH9 613 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 TBC1D9BQ66K14 1250 aa9.32□□□□□ -0.92
LINC00641-202ENST00000555688 RUFY3Q7L099 469 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms