RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 RFX7Q2KHR2 1363 aa29.96■■■□□ 2.39
PRKCH-216ENST00000555542 WDHD1O75717 1129 aaPredicted RBP29.96■■■□□ 2.39
PRKCH-216ENST00000555542 PPATQ06203 517 aa29.96■■■□□ 2.39
PRKCH-216ENST00000555542 TAF1CQ15572 869 aaPredicted RBP29.96■■■□□ 2.39
PRKCH-216ENST00000555542 ZNF384Q8TF68 577 aa29.96■■■□□ 2.39
PRKCH-216ENST00000555542 ZFYVE28Q9HCC9 887 aa29.95■■■□□ 2.39
PRKCH-216ENST00000555542 DDX4Q9NQI0 724 aaKnown RBP29.95■■■□□ 2.39
PRKCH-216ENST00000555542 ZNF112Q9UJU3 913 aa29.95■■■□□ 2.39
PRKCH-216ENST00000555542 DBNLQ9UJU6 430 aaKnown RBP29.95■■■□□ 2.39
PRKCH-216ENST00000555542 MAST2Q6P0Q8 1798 aa29.95■■■□□ 2.38
PRKCH-216ENST00000555542 HSP90AB4PQ58FF6 505 aa29.94■■■□□ 2.38
PRKCH-216ENST00000555542 NAA16Q6N069 864 aaPredicted RBP29.94■■■□□ 2.38
PRKCH-216ENST00000555542 ERO1AQ96HE7 468 aa29.94■■■□□ 2.38
PRKCH-216ENST00000555542 CHMP4BQ9H444 224 aaKnown RBP29.94■■■□□ 2.38
PRKCH-216ENST00000555542 TLR7Q9NYK1 1049 aaKnown RBP29.94■■■□□ 2.38
PRKCH-216ENST00000555542 HPS5Q9UPZ3 1129 aa29.94■■■□□ 2.38
PRKCH-216ENST00000555542 RHBDL3P58872 404 aa29.93■■■□□ 2.38
PRKCH-216ENST00000555542 FAM43AQ8N2R8 423 aa29.93■■■□□ 2.38
PRKCH-216ENST00000555542 EAF2Q96CJ1 260 aaPredicted RBP29.93■■■□□ 2.38
PRKCH-216ENST00000555542 TRIM17Q9Y577 477 aa29.93■■■□□ 2.38
PRKCH-216ENST00000555542 DDTLA6NHG4 134 aaPredicted RBP29.92■■■□□ 2.38
PRKCH-216ENST00000555542 HMMRO75330 724 aa29.92■■■□□ 2.38
PRKCH-216ENST00000555542 MAP4K4O95819 1239 aaPredicted RBP29.92■■■□□ 2.38
PRKCH-216ENST00000555542 FBXO46Q6PJ61 603 aaPredicted RBP29.92■■■□□ 2.38
PRKCH-216ENST00000555542 SH3BP5LQ7L8J4 393 aa29.92■■■□□ 2.38
PRKCH-216ENST00000555542 AACSQ86V21 672 aa29.92■■■□□ 2.38
PRKCH-216ENST00000555542 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.92■■■□□ 2.38
PRKCH-216ENST00000555542 ZNF512BQ96KM6 892 aaPredicted RBP29.92■■■□□ 2.38
PRKCH-216ENST00000555542 ZAP70P43403 619 aa29.91■■■□□ 2.38
PRKCH-216ENST00000555542 SP3Q02447 781 aa29.91■■■□□ 2.38
PRKCH-216ENST00000555542 NOL9Q5SY16 702 aaKnown RBP29.91■■■□□ 2.38
PRKCH-216ENST00000555542 TEX11Q8IYF3 940 aa29.91■■■□□ 2.38
PRKCH-216ENST00000555542 PICK1Q9NRD5 415 aa29.91■■■□□ 2.38
PRKCH-216ENST00000555542 ATRNL1Q5VV63 1379 aa29.9■■■□□ 2.38
PRKCH-216ENST00000555542 BAG3O95817 575 aa29.9■■■□□ 2.38
PRKCH-216ENST00000555542 CYP2E1P05181 493 aaPredicted RBP29.9■■■□□ 2.38
PRKCH-216ENST00000555542 RPAP2Q8IXW5 612 aaPredicted RBP29.9■■■□□ 2.38
PRKCH-216ENST00000555542 CD99L2Q8TCZ2 262 aa29.9■■■□□ 2.38
PRKCH-216ENST00000555542 BTBD19C9JJ37 291 aa29.89■■■□□ 2.38
PRKCH-216ENST00000555542 APBB1O00213 710 aa29.89■■■□□ 2.38
PRKCH-216ENST00000555542 SOX10P56693 466 aa29.89■■■□□ 2.38
PRKCH-216ENST00000555542 BCL11AQ9H165 835 aa29.89■■■□□ 2.38
PRKCH-216ENST00000555542 AATFQ9NY61 560 aaKnown RBP eCLIP29.89■■■□□ 2.38
PRKCH-216ENST00000555542 MLLT1Q03111 559 aaPredicted RBP29.88■■■□□ 2.37
PRKCH-216ENST00000555542 SCYL3Q8IZE3 742 aa29.88■■■□□ 2.37
PRKCH-216ENST00000555542 IL1RAPL2Q9NP60 686 aa29.88■■■□□ 2.37
PRKCH-216ENST00000555542 ZBTB40Q9NUA8 1239 aa29.88■■■□□ 2.37
PRKCH-216ENST00000555542 MYO5AQ9Y4I1 1855 aaKnown RBP29.87■■■□□ 2.37
PRKCH-216ENST00000555542 NPM3O75607 178 aaKnown RBP29.87■■■□□ 2.37
PRKCH-216ENST00000555542 PLCG2P16885 1265 aa29.87■■■□□ 2.37
PRKCH-216ENST00000555542 OTOP1Q7RTM1 612 aa29.87■■■□□ 2.37
PRKCH-216ENST00000555542 RHPN1Q8TCX5 695 aa29.87■■■□□ 2.37
PRKCH-216ENST00000555542 SH3RF3Q8TEJ3 882 aaPredicted RBP29.87■■■□□ 2.37
PRKCH-216ENST00000555542 ZCCHC17Q9NP64 241 aaKnown RBP29.87■■■□□ 2.37
PRKCH-216ENST00000555542 PHF20L1A8MW92 1017 aa29.86■■■□□ 2.37
PRKCH-216ENST00000555542 OSBPL5Q9H0X9 879 aaPredicted RBP29.86■■■□□ 2.37
PRKCH-216ENST00000555542 PIH1D3Q9NQM4 214 aaKnown RBP29.86■■■□□ 2.37
PRKCH-216ENST00000555542 IDH1O75874 414 aaKnown RBP29.85■■■□□ 2.37
PRKCH-216ENST00000555542 CLASRPQ8N2M8 674 aaKnown RBP29.85■■■□□ 2.37
PRKCH-216ENST00000555542 EFCC1Q9HA90 598 aa29.85■■■□□ 2.37
PRKCH-216ENST00000555542 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.85■■■□□ 2.37
PRKCH-216ENST00000555542 KCNH4Q9UQ05 1017 aa29.85■■■□□ 2.37
PRKCH-216ENST00000555542 ZHX2Q9Y6X8 837 aa29.85■■■□□ 2.37
PRKCH-216ENST00000555542 DOCK1Q14185 1865 aa29.85■■■□□ 2.37
PRKCH-216ENST00000555542 SLURP2P0DP57 97 aa29.84■■■□□ 2.37
PRKCH-216ENST00000555542 RGS19P49795 217 aa29.84■■■□□ 2.37
PRKCH-216ENST00000555542 KIF1BPQ96EK5 621 aa29.84■■■□□ 2.37
PRKCH-216ENST00000555542 COL2A1P02458 1487 aaPredicted RBP29.83■■■□□ 2.37
PRKCH-216ENST00000555542 CTNND1O60716 968 aaKnown RBP29.83■■■□□ 2.37
PRKCH-216ENST00000555542 IGSF3O75054 1194 aa29.83■■■□□ 2.37
PRKCH-216ENST00000555542 MAP3K10Q02779 954 aa29.83■■■□□ 2.37
PRKCH-216ENST00000555542 ARHGEF6Q15052 776 aa29.83■■■□□ 2.37
PRKCH-216ENST00000555542 FAM196BA6NMK8 535 aa29.82■■■□□ 2.36
PRKCH-216ENST00000555542 TLR2O60603 784 aa29.82■■■□□ 2.36
PRKCH-216ENST00000555542 PTPRAP18433 802 aa29.82■■■□□ 2.36
PRKCH-216ENST00000555542 CYP7A1P22680 504 aa29.82■■■□□ 2.36
PRKCH-216ENST00000555542 PDE3AQ14432 1141 aa29.82■■■□□ 2.36
PRKCH-216ENST00000555542 ANKRD23Q86SG2 305 aa29.82■■■□□ 2.36
PRKCH-216ENST00000555542 ADGRA1Q86SQ6 560 aa29.82■■■□□ 2.36
PRKCH-216ENST00000555542 NDUFB9Q9Y6M9 179 aa29.82■■■□□ 2.36
PRKCH-216ENST00000555542 PDHXO00330 501 aa29.81■■■□□ 2.36
PRKCH-216ENST00000555542 CXCL11O14625 94 aa29.81■■■□□ 2.36
PRKCH-216ENST00000555542 TBC1D12O60347 775 aa29.81■■■□□ 2.36
PRKCH-216ENST00000555542 IFIT2P09913 472 aaKnown RBP29.81■■■□□ 2.36
PRKCH-216ENST00000555542 C20orf194Q5TEA3 1177 aa29.81■■■□□ 2.36
PRKCH-216ENST00000555542 TGFBRAP1Q8WUH2 860 aa29.81■■■□□ 2.36
PRKCH-216ENST00000555542 PPP4CP60510 307 aa29.8■■■□□ 2.36
PRKCH-216ENST00000555542 KIF22Q14807 665 aa29.8■■■□□ 2.36
PRKCH-216ENST00000555542 MAPKAPK5Q8IW41 473 aa29.8■■■□□ 2.36
PRKCH-216ENST00000555542 SIRT2Q8IXJ6 389 aa29.8■■■□□ 2.36
PRKCH-216ENST00000555542 RAB11FIP3O75154 756 aa29.79■■■□□ 2.36
PRKCH-216ENST00000555542 MAP3K12Q12852 859 aa29.79■■■□□ 2.36
PRKCH-216ENST00000555542 MAGEB6Q8N7X4 407 aa29.79■■■□□ 2.36
PRKCH-216ENST00000555542 DHX36Q9H2U1 1008 aaKnown RBP29.79■■■□□ 2.36
PRKCH-216ENST00000555542 PTPN22Q9Y2R2 807 aa29.79■■■□□ 2.36
PRKCH-216ENST00000555542 GADL1Q6ZQY3 521 aa29.78■■■□□ 2.36
PRKCH-216ENST00000555542 FASTKD5Q7L8L6 764 aaKnown RBP29.78■■■□□ 2.36
PRKCH-216ENST00000555542 TRIM34Q9BYJ4 488 aa29.78■■■□□ 2.36
PRKCH-216ENST00000555542 ANTXR1Q9H6X2 564 aa29.78■■■□□ 2.36
PRKCH-216ENST00000555542 CDK5RAP2Q96SN8 1893 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms