RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 FAM53CQ9NYF3 392 aa7.72□□□□□ -1.17
SNX6-204ENST00000555541 RAP1GAPP47736 663 aa7.71□□□□□ -1.18
SNX6-204ENST00000555541 MLANAQ16655 118 aa7.71□□□□□ -1.18
SNX6-204ENST00000555541 TTLL10Q6ZVT0 673 aa7.71□□□□□ -1.18
SNX6-204ENST00000555541 PRDM7Q9NQW5 492 aa7.71□□□□□ -1.18
SNX6-204ENST00000555541 TMEM265A0A087WTH1 108 aa7.7□□□□□ -1.18
SNX6-204ENST00000555541 ZNF862O60290 1169 aa7.7□□□□□ -1.18
SNX6-204ENST00000555541 ANGEL2Q5VTE6 544 aaKnown RBP7.7□□□□□ -1.18
SNX6-204ENST00000555541 LRRC56Q8IYG6 542 aaPredicted RBP7.7□□□□□ -1.18
SNX6-204ENST00000555541 CCDC86Q9H6F5 360 aaKnown RBP7.7□□□□□ -1.18
SNX6-204ENST00000555541 ABCB6Q9NP58 842 aa7.7□□□□□ -1.18
SNX6-204ENST00000555541 RAPGEFL1Q9UHV5 662 aa7.7□□□□□ -1.18
SNX6-204ENST00000555541 CTNND2Q9UQB3 1225 aa7.7□□□□□ -1.18
SNX6-204ENST00000555541 PTPN12Q05209 780 aaKnown RBP7.69□□□□□ -1.18
SNX6-204ENST00000555541 FYB2Q5VWT5 728 aa7.69□□□□□ -1.18
SNX6-204ENST00000555541 LIN37Q96GY3 246 aaPredicted RBP7.69□□□□□ -1.18
SNX6-204ENST00000555541 NPHS2Q9NP85 383 aa7.69□□□□□ -1.18
SNX6-204ENST00000555541 BRPF3Q9ULD4 1205 aa7.69□□□□□ -1.18
SNX6-204ENST00000555541 H3BRB1 525 aa7.68□□□□□ -1.18
SNX6-204ENST00000555541 LIG1P18858 919 aa7.68□□□□□ -1.18
SNX6-204ENST00000555541 FAAP100Q0VG06 881 aa7.68□□□□□ -1.18
SNX6-204ENST00000555541 SMYD4Q8IYR2 804 aaPredicted RBP7.68□□□□□ -1.18
SNX6-204ENST00000555541 HEXIM2Q96MH2 286 aaKnown RBP7.68□□□□□ -1.18
SNX6-204ENST00000555541 TUT1Q9H6E5 874 aaKnown RBP7.68□□□□□ -1.18
SNX6-204ENST00000555541 LMCD1Q9NZU5 365 aa7.68□□□□□ -1.18
SNX6-204ENST00000555541 USTQ9Y2C2 406 aa7.68□□□□□ -1.18
SNX6-204ENST00000555541 SNX11Q9Y5W9 270 aa7.68□□□□□ -1.18
SNX6-204ENST00000555541 CPNE3O75131 537 aaKnown RBP7.67□□□□□ -1.18
SNX6-204ENST00000555541 BUD31P41223 144 aaPredicted RBP7.67□□□□□ -1.18
SNX6-204ENST00000555541 AP3B2Q13367 1082 aa7.67□□□□□ -1.18
SNX6-204ENST00000555541 PDE3AQ14432 1141 aa7.67□□□□□ -1.18
SNX6-204ENST00000555541 KCNMB1Q16558 191 aa7.67□□□□□ -1.18
SNX6-204ENST00000555541 KIF4BQ2VIQ3 1234 aa7.67□□□□□ -1.18
SNX6-204ENST00000555541 PRPF40BQ6NWY9 871 aaKnown RBP7.67□□□□□ -1.18
SNX6-204ENST00000555541 TXNDC2Q86VQ3 553 aa7.67□□□□□ -1.18
SNX6-204ENST00000555541 EHD4Q9H223 541 aa7.67□□□□□ -1.18
SNX6-204ENST00000555541 ATXN3LQ9H3M9 355 aa7.67□□□□□ -1.18
SNX6-204ENST00000555541 B8ZZF3 427 aa7.66□□□□□ -1.18
SNX6-204ENST00000555541 GPR182O15218 404 aa7.66□□□□□ -1.18
SNX6-204ENST00000555541 NEFMP07197 916 aa7.66□□□□□ -1.18
SNX6-204ENST00000555541 ZSCAN22P10073 491 aaPredicted RBP7.66□□□□□ -1.18
SNX6-204ENST00000555541 ID3Q02535 119 aa7.66□□□□□ -1.18
SNX6-204ENST00000555541 AMIGO3Q86WK7 504 aa7.66□□□□□ -1.18
SNX6-204ENST00000555541 DDX54Q8TDD1 881 aaKnown RBP7.66□□□□□ -1.18
SNX6-204ENST00000555541 CCDC74AQ96AQ1 378 aa7.66□□□□□ -1.18
SNX6-204ENST00000555541 TMEM238LA0A1B0GVL6 79 aa7.65□□□□□ -1.18
SNX6-204ENST00000555541 NEFLP07196 543 aa7.65□□□□□ -1.18
SNX6-204ENST00000555541 TTLL4Q14679 1199 aa7.65□□□□□ -1.18
SNX6-204ENST00000555541 RPS26P11Q5JNZ5 115 aaPredicted RBP7.65□□□□□ -1.18
SNX6-204ENST00000555541 GLYCTKQ8IVS8 523 aa7.65□□□□□ -1.18
SNX6-204ENST00000555541 ZSCAN18Q8TBC5 510 aaPredicted RBP7.65□□□□□ -1.18
SNX6-204ENST00000555541 CITED4Q96RK1 184 aa7.65□□□□□ -1.18
SNX6-204ENST00000555541 PPP1R16BQ96T49 567 aa7.65□□□□□ -1.18
SNX6-204ENST00000555541 EIF1AYO14602 144 aaKnown RBP7.64□□□□□ -1.19
SNX6-204ENST00000555541 PRR23BQ6ZRT6 265 aa7.64□□□□□ -1.19
SNX6-204ENST00000555541 SPACA3Q8IXA5 215 aa7.64□□□□□ -1.19
SNX6-204ENST00000555541 NIF3L1Q9GZT8 377 aa7.64□□□□□ -1.19
SNX6-204ENST00000555541 DNAJC25Q9H1X3 360 aa7.64□□□□□ -1.19
SNX6-204ENST00000555541 PIDD1Q9HB75 910 aa7.64□□□□□ -1.19
SNX6-204ENST00000555541 C1QTNF9P0C862 333 aa7.63□□□□□ -1.19
SNX6-204ENST00000555541 PDE3BQ13370 1112 aa7.63□□□□□ -1.19
SNX6-204ENST00000555541 GRM2Q14416 872 aa7.63□□□□□ -1.19
SNX6-204ENST00000555541 SYDE1Q6ZW31 735 aaPredicted RBP7.63□□□□□ -1.19
SNX6-204ENST00000555541 C19orf73Q9NVV2 129 aa7.63□□□□□ -1.19
SNX6-204ENST00000555541 PCOLCE2Q9UKZ9 415 aa7.63□□□□□ -1.19
SNX6-204ENST00000555541 NDUFB5O43674 189 aa7.62□□□□□ -1.19
SNX6-204ENST00000555541 ZNF157P51786 506 aaPredicted RBP7.62□□□□□ -1.19
SNX6-204ENST00000555541 PDZD3Q86UT5 571 aa7.62□□□□□ -1.19
SNX6-204ENST00000555541 ANKLE2Q86XL3 938 aa7.62□□□□□ -1.19
SNX6-204ENST00000555541 KRT82Q9NSB4 513 aa7.62□□□□□ -1.19
SNX6-204ENST00000555541 GLI1P08151 1106 aa7.61□□□□□ -1.19
SNX6-204ENST00000555541 SLFN14P0C7P3 912 aa7.61□□□□□ -1.19
SNX6-204ENST00000555541 HCLS1P14317 486 aaPredicted RBP7.61□□□□□ -1.19
SNX6-204ENST00000555541 ITIH2P19823 946 aa7.61□□□□□ -1.19
SNX6-204ENST00000555541 ZP2Q05996 745 aa7.61□□□□□ -1.19
SNX6-204ENST00000555541 NKPD1Q17RQ9 610 aa7.61□□□□□ -1.19
SNX6-204ENST00000555541 TOP6BLQ8N6T0 577 aa7.61□□□□□ -1.19
SNX6-204ENST00000555541 EPS8L3Q8TE67 593 aaKnown RBP7.61□□□□□ -1.19
SNX6-204ENST00000555541 ASB11Q8WXH4 323 aa7.61□□□□□ -1.19
SNX6-204ENST00000555541 ISL2Q96A47 359 aa7.61□□□□□ -1.19
SNX6-204ENST00000555541 IGF2BP3O00425 579 aaKnown RBP eCLIP7.6□□□□□ -1.19
SNX6-204ENST00000555541 KRTAP5-3Q6L8H2 238 aa7.6□□□□□ -1.19
SNX6-204ENST00000555541 B4GALNT3Q6L9W6 998 aa7.6□□□□□ -1.19
SNX6-204ENST00000555541 STK35Q8TDR2 534 aa7.6□□□□□ -1.19
SNX6-204ENST00000555541 ALKBH8Q96BT7 664 aaKnown RBP7.6□□□□□ -1.19
SNX6-204ENST00000555541 CSRNP1Q96S65 589 aa7.6□□□□□ -1.19
SNX6-204ENST00000555541 ZC3H12CQ9C0D7 883 aaKnown RBP7.6□□□□□ -1.19
SNX6-204ENST00000555541 PITPNM2Q9BZ72 1349 aa7.59□□□□□ -1.19
SNX6-204ENST00000555541 GSTP1P09211 210 aaKnown RBP7.59□□□□□ -1.19
SNX6-204ENST00000555541 AFMP43652 599 aa7.59□□□□□ -1.19
SNX6-204ENST00000555541 RBCK1Q9BYM8 510 aa7.59□□□□□ -1.19
SNX6-204ENST00000555541 IKZF1Q13422 519 aa7.58□□□□□ -1.2
SNX6-204ENST00000555541 PI16Q6UXB8 463 aa7.58□□□□□ -1.2
SNX6-204ENST00000555541 CD320Q9NPF0 282 aa7.58□□□□□ -1.2
SNX6-204ENST00000555541 RNGTTO60942 597 aaKnown RBP7.57□□□□□ -1.2
SNX6-204ENST00000555541 GADD45BO75293 160 aaPredicted RBP7.57□□□□□ -1.2
SNX6-204ENST00000555541 NTF4P34130 210 aa7.57□□□□□ -1.2
SNX6-204ENST00000555541 ZC3H12AQ5D1E8 599 aaKnown RBP7.57□□□□□ -1.2
SNX6-204ENST00000555541 TRAK1Q9UPV9 953 aa7.57□□□□□ -1.2
SNX6-204ENST00000555541 ARHGAP27Q6ZUM4 889 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms