RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 TRIM34Q9BYJ4 488 aa12.06□□□□□ -0.48
NEK9-205ENST00000555405 SOCS7O14512 581 aa12.06□□□□□ -0.48
NEK9-205ENST00000555405 APOBRQ0VD83 1088 aa12.06□□□□□ -0.48
NEK9-205ENST00000555405 KRT32Q14532 448 aa12.06□□□□□ -0.48
NEK9-205ENST00000555405 TPRNQ4KMQ1 711 aa12.06□□□□□ -0.48
NEK9-205ENST00000555405 CTR9Q6PD62 1173 aa12.06□□□□□ -0.48
NEK9-205ENST00000555405 RUFY3Q7L099 469 aa12.06□□□□□ -0.48
NEK9-205ENST00000555405 CCDC82Q8N4S0 544 aa12.06□□□□□ -0.48
NEK9-205ENST00000555405 NCOA7Q8NI08 942 aa12.06□□□□□ -0.48
NEK9-205ENST00000555405 ZNF526Q8TF50 670 aaPredicted RBP12.06□□□□□ -0.48
NEK9-205ENST00000555405 TMOD2Q9NZR1 351 aa12.06□□□□□ -0.48
NEK9-205ENST00000555405 CHD4Q14839 1912 aa12.06□□□□□ -0.48
NEK9-205ENST00000555405 K7ELQ4 463 aaPredicted RBP12.05□□□□□ -0.48
NEK9-205ENST00000555405 PRC1O43663 620 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 PLCD1P51178 756 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 ANAPC15P60006 121 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 TNIP1Q15025 636 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 CCDC83Q8IWF9 413 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 ZFPM1Q8IX07 1006 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 CASZ1Q86V15 1759 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 MPHOSPH10O00566 681 aaKnown RBP12.05□□□□□ -0.48
NEK9-205ENST00000555405 IFIT3O14879 490 aaKnown RBP12.05□□□□□ -0.48
NEK9-205ENST00000555405 GRIPAP1Q4V328 841 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 PRAMEF18Q5VWM3 479 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 CRACR2BQ8N4Y2 399 aaPredicted RBP12.05□□□□□ -0.48
NEK9-205ENST00000555405 NKX2-3Q8TAU0 364 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 CNOT7Q9UIV1 285 aaKnown RBP12.05□□□□□ -0.48
NEK9-205ENST00000555405 RFX7Q2KHR2 1363 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 MYH13Q9UKX3 1938 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 GPR75-ASB3A0A0A6YYF3 556 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 EGFRP00533 1210 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 LMNB1P20700 586 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 NBPF9Q3BBW0 867 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 MICALL2Q8IY33 904 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 MYL10Q9BUA6 226 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 DDX4Q9NQI0 724 aaKnown RBP12.05□□□□□ -0.48
NEK9-205ENST00000555405 NRXN2Q9P2S2 1712 aa12.05□□□□□ -0.48
NEK9-205ENST00000555405 TSPY2A6NKD2 308 aa12.04□□□□□ -0.48
NEK9-205ENST00000555405 PLCG2P16885 1265 aa12.04□□□□□ -0.48
NEK9-205ENST00000555405 RPS6KB1P23443 525 aa12.04□□□□□ -0.48
NEK9-205ENST00000555405 AKNAD1Q5T1N1 836 aa12.04□□□□□ -0.48
NEK9-205ENST00000555405 APOBEC3HQ6NTF7 200 aaKnown RBP12.04□□□□□ -0.48
NEK9-205ENST00000555405 NUP133Q8WUM0 1156 aa12.04□□□□□ -0.48
NEK9-205ENST00000555405 TMX3Q96JJ7 454 aa12.04□□□□□ -0.48
NEK9-205ENST00000555405 SALL1Q9NSC2 1324 aa12.04□□□□□ -0.48
NEK9-205ENST00000555405 NEDD4P46934 1319 aa12.04□□□□□ -0.48
NEK9-205ENST00000555405 ZNF541Q9H0D2 1346 aa12.04□□□□□ -0.48
NEK9-205ENST00000555405 PRKG1Q13976 671 aa12.04□□□□□ -0.48
NEK9-205ENST00000555405 ZNF444Q8N0Y2 327 aaPredicted RBP12.04□□□□□ -0.48
NEK9-205ENST00000555405 SLC3A2P08195 630 aaKnown RBP12.04□□□□□ -0.48
NEK9-205ENST00000555405 DHX32Q7L7V1 743 aaKnown RBP12.04□□□□□ -0.48
NEK9-205ENST00000555405 PIBF1Q8WXW3 757 aa12.04□□□□□ -0.48
NEK9-205ENST00000555405 ATP8A2Q9NTI2 1148 aa12.04□□□□□ -0.48
NEK9-205ENST00000555405 VIL1P09327 827 aaKnown RBP12.03□□□□□ -0.48
NEK9-205ENST00000555405 MCM5P33992 734 aa12.03□□□□□ -0.48
NEK9-205ENST00000555405 RHBDL3P58872 404 aa12.03□□□□□ -0.48
NEK9-205ENST00000555405 TMEM67Q5HYA8 995 aa12.03□□□□□ -0.48
NEK9-205ENST00000555405 SAMD1Q6SPF0 538 aaPredicted RBP12.03□□□□□ -0.48
NEK9-205ENST00000555405 UBAC1Q9BSL1 405 aa12.03□□□□□ -0.48
NEK9-205ENST00000555405 ZSWIM6Q9HCJ5 1215 aa12.03□□□□□ -0.48
NEK9-205ENST00000555405 ZSWIM5Q9P217 1185 aa12.03□□□□□ -0.48
NEK9-205ENST00000555405 PDS5AQ29RF7 1337 aaKnown RBP12.03□□□□□ -0.48
NEK9-205ENST00000555405 ERICH2A1L162 156 aa12.03□□□□□ -0.48
NEK9-205ENST00000555405 H7C1D1 291 aa12.03□□□□□ -0.48
NEK9-205ENST00000555405 NMT2O60551 498 aa12.03□□□□□ -0.48
NEK9-205ENST00000555405 LARGE1O95461 756 aa12.03□□□□□ -0.48
NEK9-205ENST00000555405 CYB5R4Q7L1T6 521 aa12.03□□□□□ -0.48
NEK9-205ENST00000555405 MIGA2Q7L4E1 593 aa12.03□□□□□ -0.48
NEK9-205ENST00000555405 DDX11Q96FC9 970 aa12.03□□□□□ -0.48
NEK9-205ENST00000555405 NCOA5Q9HCD5 579 aaKnown RBP12.03□□□□□ -0.48
NEK9-205ENST00000555405 DUOX1Q9NRD9 1551 aa12.02□□□□□ -0.48
NEK9-205ENST00000555405 MYO1BO43795 1136 aa12.02□□□□□ -0.48
NEK9-205ENST00000555405 TACC3Q9Y6A5 838 aa12.02□□□□□ -0.48
NEK9-205ENST00000555405 ASTN2O75129 1339 aaPredicted RBP12.02□□□□□ -0.48
NEK9-205ENST00000555405 FLT1P17948 1338 aa12.02□□□□□ -0.48
NEK9-205ENST00000555405 EPS15P42566 896 aa12.02□□□□□ -0.49
NEK9-205ENST00000555405 MICU3Q86XE3 530 aa12.02□□□□□ -0.49
NEK9-205ENST00000555405 NBPF3Q9H094 633 aa12.02□□□□□ -0.49
NEK9-205ENST00000555405 STX8Q9UNK0 236 aa12.02□□□□□ -0.49
NEK9-205ENST00000555405 LIMCH1Q9UPQ0 1083 aa12.02□□□□□ -0.49
NEK9-205ENST00000555405 PDE4BQ07343 736 aa12.02□□□□□ -0.49
NEK9-205ENST00000555405 EAPPQ56P03 285 aaPredicted RBP12.02□□□□□ -0.49
NEK9-205ENST00000555405 SENP2Q9HC62 589 aa12.02□□□□□ -0.49
NEK9-205ENST00000555405 KLF18A0A0U1RQI7 1052 aa12.01□□□□□ -0.49
NEK9-205ENST00000555405 WDHD1O75717 1129 aaPredicted RBP12.01□□□□□ -0.49
NEK9-205ENST00000555405 PPP4CP60510 307 aa12.01□□□□□ -0.49
NEK9-205ENST00000555405 TFAP4Q01664 338 aa12.01□□□□□ -0.49
NEK9-205ENST00000555405 HHIPL2Q6UWX4 724 aa12.01□□□□□ -0.49
NEK9-205ENST00000555405 RNF41Q9H4P4 317 aaPredicted RBP12.01□□□□□ -0.49
NEK9-205ENST00000555405 TPCN1Q9ULQ1 816 aa12.01□□□□□ -0.49
NEK9-205ENST00000555405 ESR2Q92731 530 aa12.01□□□□□ -0.49
NEK9-205ENST00000555405 MYOZ2Q9NPC6 264 aa12.01□□□□□ -0.49
NEK9-205ENST00000555405 HLA-DOAP06340 250 aa12.01□□□□□ -0.49
NEK9-205ENST00000555405 TSPY3P0CV98 308 aa12.01□□□□□ -0.49
NEK9-205ENST00000555405 TSPY8P0CW00 308 aa12.01□□□□□ -0.49
NEK9-205ENST00000555405 DLK2Q6UY11 383 aa12.01□□□□□ -0.49
NEK9-205ENST00000555405 CLEC10AQ8IUN9 316 aa12.01□□□□□ -0.49
NEK9-205ENST00000555405 ZDHHC15Q96MV8 337 aa12.01□□□□□ -0.49
NEK9-205ENST00000555405 SUGT1Q9Y2Z0 365 aa12.01□□□□□ -0.49
NEK9-205ENST00000555405 ME3Q16798 604 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms