RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-208	ENST00000555094	CHMP5	Q9NZZ3	219 aa		12.85	□□□□□ -0.35
GABRB3-208	ENST00000555094	MKRN1	Q9UHC7	482 aa	Known RBP	12.85	□□□□□ -0.35
GABRB3-208	ENST00000555094	TTF2	Q9UNY4	1162 aa	Known RBP	12.85	□□□□□ -0.35
GABRB3-208	ENST00000555094	ROBO3	Q96MS0	1386 aa		12.84	□□□□□ -0.35
GABRB3-208	ENST00000555094		F8W031	263 aa	Predicted RBP	12.84	□□□□□ -0.35
GABRB3-208	ENST00000555094	SMIM22	K7EJ46	135 aa		12.84	□□□□□ -0.35
GABRB3-208	ENST00000555094	PRC1	O43663	620 aa		12.84	□□□□□ -0.35
GABRB3-208	ENST00000555094	MCM5	P33992	734 aa		12.84	□□□□□ -0.35
GABRB3-208	ENST00000555094	CTR9	Q6PD62	1173 aa		12.84	□□□□□ -0.35
GABRB3-208	ENST00000555094	CYB5R4	Q7L1T6	521 aa		12.84	□□□□□ -0.35
GABRB3-208	ENST00000555094	CHST3	Q7LGC8	479 aa		12.84	□□□□□ -0.35
GABRB3-208	ENST00000555094	FBXL16	Q8N461	479 aa		12.84	□□□□□ -0.35
GABRB3-208	ENST00000555094	BRF1	Q92994	677 aa		12.84	□□□□□ -0.35
GABRB3-208	ENST00000555094	SPON1	Q9HCB6	807 aa		12.84	□□□□□ -0.35
GABRB3-208	ENST00000555094	ARPP21	Q9UBL0	812 aa	Predicted RBP	12.84	□□□□□ -0.35
GABRB3-208	ENST00000555094		B4E1Z4	1266 aa		12.83	□□□□□ -0.36
GABRB3-208	ENST00000555094	NFKBIE	O00221	500 aa		12.83	□□□□□ -0.36
GABRB3-208	ENST00000555094	CYP2D6	P10635	497 aa		12.83	□□□□□ -0.36
GABRB3-208	ENST00000555094	PLCG2	P16885	1265 aa		12.83	□□□□□ -0.36
GABRB3-208	ENST00000555094	EVX2	Q03828	476 aa		12.83	□□□□□ -0.36
GABRB3-208	ENST00000555094	TRDN	Q13061	729 aa		12.83	□□□□□ -0.36
GABRB3-208	ENST00000555094	SBK1	Q52WX2	424 aa		12.83	□□□□□ -0.36
GABRB3-208	ENST00000555094	TEX11	Q8IYF3	940 aa		12.83	□□□□□ -0.36
GABRB3-208	ENST00000555094	LARGE2	Q8N3Y3	721 aa		12.83	□□□□□ -0.36
GABRB3-208	ENST00000555094	CNNM2	Q9H8M5	875 aa		12.83	□□□□□ -0.36
GABRB3-208	ENST00000555094	INCENP	Q9NQS7	918 aa		12.83	□□□□□ -0.36
GABRB3-208	ENST00000555094	GPHN	Q9NQX3	736 aa	Predicted RBP	12.83	□□□□□ -0.36
GABRB3-208	ENST00000555094	MINDY4B	A8MYZ0	360 aa		12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	USP17L12	C9JPN9	530 aa		12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	USP17L21	D6R901	530 aa		12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	IARS	P41252	1262 aa	Known RBP	12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	USP5	P45974	858 aa		12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	SCNN1D	P51172	638 aa		12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	HHIPL2	Q6UWX4	724 aa		12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	MFSD6	Q6ZSS7	791 aa		12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	CCDC83	Q8IWF9	413 aa		12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	TEKT1	Q969V4	418 aa		12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	KRT23	Q9C075	422 aa		12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	TAOK3	Q9H2K8	898 aa		12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	RNF41	Q9H4P4	317 aa	Predicted RBP	12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	CWC22	Q9HCG8	908 aa	Known RBP	12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	GOLGB1	Q14789	3259 aa	Known RBP	12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	FLT1	P17948	1338 aa		12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	LTBP3	Q9NS15	1303 aa		12.82	□□□□□ -0.36
GABRB3-208	ENST00000555094	SH2B2	O14492	632 aa	Predicted RBP	12.81	□□□□□ -0.36
GABRB3-208	ENST00000555094	USP17L8	P0C7I0	530 aa		12.81	□□□□□ -0.36
GABRB3-208	ENST00000555094	CRK	P46108	304 aa		12.81	□□□□□ -0.36
GABRB3-208	ENST00000555094	EVC	P57679	992 aa		12.81	□□□□□ -0.36
GABRB3-208	ENST00000555094	FGD1	P98174	961 aa		12.81	□□□□□ -0.36
GABRB3-208	ENST00000555094	APOBR	Q0VD83	1088 aa		12.81	□□□□□ -0.36
GABRB3-208	ENST00000555094	KIAA0825	Q8IV33	1275 aa		12.81	□□□□□ -0.36
GABRB3-208	ENST00000555094	MAPKAPK5	Q8IW41	473 aa		12.81	□□□□□ -0.36
GABRB3-208	ENST00000555094	NECAB1	Q8N987	351 aa		12.81	□□□□□ -0.36
GABRB3-208	ENST00000555094	TGFBRAP1	Q8WUH2	860 aa		12.81	□□□□□ -0.36
GABRB3-208	ENST00000555094	BCS1L	Q9Y276	419 aa		12.81	□□□□□ -0.36
GABRB3-208	ENST00000555094	SIPA1L1	O43166	1804 aa		12.81	□□□□□ -0.36
GABRB3-208	ENST00000555094	KDM4A	O75164	1064 aa		12.8	□□□□□ -0.36
GABRB3-208	ENST00000555094	FGR	P09769	529 aa		12.8	□□□□□ -0.36
GABRB3-208	ENST00000555094	PC	P11498	1178 aa	Known RBP	12.8	□□□□□ -0.36
GABRB3-208	ENST00000555094	HDLBP	Q00341	1268 aa	Known RBP	12.8	□□□□□ -0.36
GABRB3-208	ENST00000555094	C12orf60	Q5U649	245 aa		12.8	□□□□□ -0.36
GABRB3-208	ENST00000555094	NIM1K	Q8IY84	436 aa		12.8	□□□□□ -0.36
GABRB3-208	ENST00000555094	GTF3C6	Q969F1	213 aa		12.8	□□□□□ -0.36
GABRB3-208	ENST00000555094	ZDHHC15	Q96MV8	337 aa		12.8	□□□□□ -0.36
GABRB3-208	ENST00000555094	MRI	Q9BWK5	157 aa		12.8	□□□□□ -0.36
GABRB3-208	ENST00000555094	MCM9	Q9NXL9	1143 aa		12.8	□□□□□ -0.36
GABRB3-208	ENST00000555094	MYH8	P13535	1937 aa		12.8	□□□□□ -0.36
GABRB3-208	ENST00000555094	DICER1	Q9UPY3	1922 aa	Known RBP	12.8	□□□□□ -0.36
GABRB3-208	ENST00000555094	PSMD14	O00487	310 aa		12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	ORC4	O43929	436 aa		12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	PFKFB2	O60825	505 aa		12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	STK3	Q13188	491 aa		12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	RAB3GAP1	Q15042	981 aa		12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	RRP12	Q5JTH9	1297 aa	Known RBP	12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	APOBEC3H	Q6NTF7	200 aa	Known RBP	12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	STK11IP	Q8N1F8	1099 aa		12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	TMEM87B	Q96K49	555 aa		12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	GML	Q99445	158 aa		12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	ZSWIM5	Q9P217	1185 aa		12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	ZNRF3	Q9ULT6	936 aa		12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	ANGEL1	Q9UNK9	670 aa	Known RBP	12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	MYO3B	Q8WXR4	1341 aa		12.79	□□□□□ -0.36
GABRB3-208	ENST00000555094	WDHD1	O75717	1129 aa	Predicted RBP	12.78	□□□□□ -0.36
GABRB3-208	ENST00000555094	RAD17	O75943	681 aa		12.78	□□□□□ -0.36
GABRB3-208	ENST00000555094	VIL1	P09327	827 aa	Known RBP	12.78	□□□□□ -0.36
GABRB3-208	ENST00000555094	RASSF7	Q02833	373 aa		12.78	□□□□□ -0.36
GABRB3-208	ENST00000555094	CDC42EP5	Q6NZY7	148 aa		12.78	□□□□□ -0.36
GABRB3-208	ENST00000555094	IGDCC4	Q8TDY8	1250 aa		12.78	□□□□□ -0.36
GABRB3-208	ENST00000555094	ZNF274	Q96GC6	653 aa	Predicted RBP	12.78	□□□□□ -0.36
GABRB3-208	ENST00000555094	MTA3	Q9BTC8	594 aa		12.78	□□□□□ -0.36
GABRB3-208	ENST00000555094	LY9	Q9HBG7	655 aa		12.78	□□□□□ -0.36
GABRB3-208	ENST00000555094	TOMM22	Q9NS69	142 aa		12.78	□□□□□ -0.36
GABRB3-208	ENST00000555094	SAP30BP	Q9UHR5	308 aa	Known RBP	12.78	□□□□□ -0.36
GABRB3-208	ENST00000555094	SERPINA10	Q9UK55	444 aa		12.78	□□□□□ -0.36
GABRB3-208	ENST00000555094	BRPF3	Q9ULD4	1205 aa		12.78	□□□□□ -0.36
GABRB3-208	ENST00000555094	PCDHAC2	Q9Y5I4	1007 aa		12.78	□□□□□ -0.36
GABRB3-208	ENST00000555094	KLF18	A0A0U1RQI7	1052 aa		12.78	□□□□□ -0.36

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