RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TRIM56Q9BRZ2 755 aaKnown RBP7.67□□□□□ -1.18
SYNE2-216ENST00000555002 VCX3AQ9NNX9 186 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 KRT3P12035 628 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 XPAP23025 273 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-216ENST00000555002 GBP6Q6ZN66 633 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 CEP128Q6ZU80 1094 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 SPDL1Q96EA4 605 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 TEX13AQ9BXU3 409 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-216ENST00000555002 AZI2Q9H6S1 392 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 ABCF3Q9NUQ8 709 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 PPFIA2O75334 1257 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 UFL1O94874 794 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 MYCP01106 439 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-216ENST00000555002 ZNF174Q15697 407 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 TSNAXIP1Q2TAA8 658 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 USH1GQ495M9 461 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 CCDC26Q8TAB7 109 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 MORC4Q8TE76 937 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 PAGR1Q9BTK6 254 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 RBM28Q9NW13 759 aaKnown RBP7.67□□□□□ -1.18
SYNE2-216ENST00000555002 PIK3R4Q99570 1358 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 ARHGEF35A5YM69 484 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 RXRAP19793 462 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 NCAPH2Q6IBW4 605 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 ZNF365Q70YC5 407 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 DNAJC25Q9H1X3 360 aa7.67□□□□□ -1.18
SYNE2-216ENST00000555002 VWA3AA6NCI4 1184 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 RAPGEF3O95398 923 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 FBXW4P57775 412 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 NBPF11Q86T75 865 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 PDZD8Q8NEN9 1154 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 CCNT1O60563 726 aaKnown RBP7.66□□□□□ -1.18
SYNE2-216ENST00000555002 TBC1D8O95759 1140 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 TCIRG1Q13488 830 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 ZSCAN23Q3MJ62 389 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 HELBQ8NG08 1087 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-216ENST00000555002 ARHGEF10LQ9HCE6 1279 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 RPL13P26373 211 aaKnown RBP7.66□□□□□ -1.18
SYNE2-216ENST00000555002 SLC12A1Q13621 1099 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 RUFY3Q7L099 469 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 XAGE3Q8WTP9 111 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 NLRP3Q96P20 1036 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 SLC9C2Q5TAH2 1124 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 TBC1D9Q6ZT07 1266 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 CHPF2Q9P2E5 772 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 HDAC11Q96DB2 347 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 VPS37BQ9H9H4 285 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 SYNJ2O15056 1496 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 A0A1B0GUL7 405 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 ARHGAP42A6NI28 874 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 PHEXP78562 749 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 PPP4R1Q8TF05 950 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 HVCN1Q96D96 273 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 RILPQ96NA2 401 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 EYA3Q99504 573 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 NYXQ9GZU5 481 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 BAG5Q9UL15 447 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 CALUO43852 315 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-216ENST00000555002 KIF22Q14807 665 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 ATICP31939 592 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 RAD51AP2Q09MP3 1159 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 FAM193BQ96PV7 902 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-216ENST00000555002 ZKSCAN3Q9BRR0 538 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 EXOC7Q9UPT5 735 aa7.66□□□□□ -1.18
SYNE2-216ENST00000555002 TRIM50Q86XT4 487 aa7.65□□□□□ -1.18
SYNE2-216ENST00000555002 STK25O00506 426 aa7.65□□□□□ -1.18
SYNE2-216ENST00000555002 KRT28Q7Z3Y7 464 aa7.65□□□□□ -1.18
SYNE2-216ENST00000555002 ZC3H12CQ9C0D7 883 aaKnown RBP7.65□□□□□ -1.18
SYNE2-216ENST00000555002 GNA11P29992 359 aa7.65□□□□□ -1.18
SYNE2-216ENST00000555002 BRD3Q15059 726 aa7.65□□□□□ -1.18
SYNE2-216ENST00000555002 LETM2Q2VYF4 491 aa7.65□□□□□ -1.18
SYNE2-216ENST00000555002 ACRBPQ8NEB7 543 aa7.65□□□□□ -1.18
SYNE2-216ENST00000555002 NSFL1CQ9UNZ2 370 aaKnown RBP7.65□□□□□ -1.18
SYNE2-216ENST00000555002 PI4KAP2A4QPH2 592 aa7.65□□□□□ -1.18
SYNE2-216ENST00000555002 SNRPA1P09661 255 aaKnown RBP7.65□□□□□ -1.18
SYNE2-216ENST00000555002 IRX3P78415 501 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-216ENST00000555002 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.65□□□□□ -1.18
SYNE2-216ENST00000555002 HP1BP3Q5SSJ5 553 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-216ENST00000555002 PI4KAP1Q8N8J0 262 aa7.65□□□□□ -1.18
SYNE2-216ENST00000555002 SPDYE1Q8NFV5 336 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-216ENST00000555002 SLC9A5Q14940 896 aa7.65□□□□□ -1.18
SYNE2-216ENST00000555002 RMDN2Q96LZ7 410 aa7.65□□□□□ -1.18
SYNE2-216ENST00000555002 PLEKHA4Q9H4M7 779 aa7.65□□□□□ -1.18
SYNE2-216ENST00000555002 SH2D4AQ9H788 454 aa7.65□□□□□ -1.18
SYNE2-216ENST00000555002 GNPATO15228 680 aa7.65□□□□□ -1.19
SYNE2-216ENST00000555002 YARSP54577 528 aaKnown RBP7.65□□□□□ -1.19
SYNE2-216ENST00000555002 ANKRD35Q8N283 1001 aa7.65□□□□□ -1.19
SYNE2-216ENST00000555002 IFNKQ9P0W0 207 aa7.65□□□□□ -1.19
SYNE2-216ENST00000555002 SESN3P58005 492 aa7.65□□□□□ -1.19
SYNE2-216ENST00000555002 DTHD1Q6ZMT9 781 aa7.65□□□□□ -1.19
SYNE2-216ENST00000555002 SMCR8Q8TEV9 937 aaPredicted RBP7.65□□□□□ -1.19
SYNE2-216ENST00000555002 NVLO15381 856 aaKnown RBP7.65□□□□□ -1.19
SYNE2-216ENST00000555002 DNM2P50570 870 aa7.65□□□□□ -1.19
SYNE2-216ENST00000555002 PHLDB2Q86SQ0 1253 aa7.65□□□□□ -1.19
SYNE2-216ENST00000555002 HAUS8Q9BT25 410 aa7.65□□□□□ -1.19
SYNE2-216ENST00000555002 NUB1Q9Y5A7 615 aa7.65□□□□□ -1.19
SYNE2-216ENST00000555002 EMILIN1Q9Y6C2 1016 aa7.65□□□□□ -1.19
SYNE2-216ENST00000555002 SND1Q7KZF4 910 aaKnown RBP eCLIP7.64□□□□□ -1.19
SYNE2-216ENST00000555002 HACE1Q8IYU2 909 aa7.64□□□□□ -1.19
SYNE2-216ENST00000555002 CCDC94Q9BW85 323 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms