RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 MCM9Q9NXL9 1143 aa17.06■□□□□ 0.32
SHOX2-206ENST00000554685 CNOT7Q9UIV1 285 aaKnown RBP17.06■□□□□ 0.32
SHOX2-206ENST00000554685 FLT1P17948 1338 aa17.05■□□□□ 0.32
SHOX2-206ENST00000554685 LMOD1P29536 600 aaPredicted RBP17.05■□□□□ 0.32
SHOX2-206ENST00000554685 NT5C2P49902 561 aa17.05■□□□□ 0.32
SHOX2-206ENST00000554685 PPARAQ07869 468 aa17.05■□□□□ 0.32
SHOX2-206ENST00000554685 TRDNQ13061 729 aa17.05■□□□□ 0.32
SHOX2-206ENST00000554685 MAPKAPK5Q8IW41 473 aa17.05■□□□□ 0.32
SHOX2-206ENST00000554685 RASEFQ8IZ41 740 aa17.05■□□□□ 0.32
SHOX2-206ENST00000554685 JAKMIP1Q96N16 626 aaKnown RBP17.05■□□□□ 0.32
SHOX2-206ENST00000554685 KIF2CQ99661 725 aa17.05■□□□□ 0.32
SHOX2-206ENST00000554685 GPRC5DQ9NZD1 345 aa17.05■□□□□ 0.32
SHOX2-206ENST00000554685 MKRN1Q9UHC7 482 aaKnown RBP17.05■□□□□ 0.32
SHOX2-206ENST00000554685 ANAPC4Q9UJX5 808 aa17.05■□□□□ 0.32
SHOX2-206ENST00000554685 MINDY4BA8MYZ0 360 aa17.04■□□□□ 0.32
SHOX2-206ENST00000554685 USP17L12C9JPN9 530 aa17.04■□□□□ 0.32
SHOX2-206ENST00000554685 USP17L21D6R901 530 aa17.04■□□□□ 0.32
SHOX2-206ENST00000554685 ST18O60284 1047 aa17.04■□□□□ 0.32
SHOX2-206ENST00000554685 ENTPD3O75355 529 aa17.04■□□□□ 0.32
SHOX2-206ENST00000554685 WDHD1O75717 1129 aaPredicted RBP17.04■□□□□ 0.32
SHOX2-206ENST00000554685 POLR3DP05423 398 aaPredicted RBP17.04■□□□□ 0.32
SHOX2-206ENST00000554685 HAND2P61296 217 aa17.04■□□□□ 0.32
SHOX2-206ENST00000554685 CTR9Q6PD62 1173 aa17.04■□□□□ 0.32
SHOX2-206ENST00000554685 ZBED3Q96IU2 234 aaPredicted RBP17.04■□□□□ 0.32
SHOX2-206ENST00000554685 PRMT6Q96LA8 375 aaPredicted RBP17.04■□□□□ 0.32
SHOX2-206ENST00000554685 TDRD3Q9H7E2 651 aaKnown RBP17.04■□□□□ 0.32
SHOX2-206ENST00000554685 CNNM2Q9H8M5 875 aa17.04■□□□□ 0.32
SHOX2-206ENST00000554685 TAOK2Q9UL54 1235 aa17.04■□□□□ 0.32
SHOX2-206ENST00000554685 E7EWF7 191 aa17.03■□□□□ 0.32
SHOX2-206ENST00000554685 SPDYE2Q495Y8 402 aa17.03■□□□□ 0.32
SHOX2-206ENST00000554685 FKBP1CQ5VVH2 108 aa17.03■□□□□ 0.32
SHOX2-206ENST00000554685 BLOC1S2Q6QNY1 142 aa17.03■□□□□ 0.32
SHOX2-206ENST00000554685 RALYLQ86SE5 291 aaKnown RBP17.03■□□□□ 0.32
SHOX2-206ENST00000554685 TTC6Q86TZ1 520 aa17.03■□□□□ 0.32
SHOX2-206ENST00000554685 NEK1Q96PY6 1258 aa17.03■□□□□ 0.32
SHOX2-206ENST00000554685 OSBPL5Q9H0X9 879 aaPredicted RBP17.03■□□□□ 0.32
SHOX2-206ENST00000554685 DHX36Q9H2U1 1008 aaKnown RBP17.03■□□□□ 0.32
SHOX2-206ENST00000554685 ZNF287Q9HBT7 754 aa17.03■□□□□ 0.32
SHOX2-206ENST00000554685 CYP46A1Q9Y6A2 500 aa17.03■□□□□ 0.32
SHOX2-206ENST00000554685 HLA-DOAP06340 250 aa17.02■□□□□ 0.32
SHOX2-206ENST00000554685 CASTP20810 708 aaKnown RBP17.02■□□□□ 0.32
SHOX2-206ENST00000554685 PICALMQ13492 652 aa17.02■□□□□ 0.32
SHOX2-206ENST00000554685 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.32
SHOX2-206ENST00000554685 AKNAD1Q5T1N1 836 aa17.02■□□□□ 0.32
SHOX2-206ENST00000554685 C12orf60Q5U649 245 aa17.02■□□□□ 0.32
SHOX2-206ENST00000554685 MFSD6Q6ZSS7 791 aa17.02■□□□□ 0.32
SHOX2-206ENST00000554685 NCOA7Q8NI08 942 aa17.02■□□□□ 0.32
SHOX2-206ENST00000554685 STAG1Q8WVM7 1258 aa17.02■□□□□ 0.32
SHOX2-206ENST00000554685 KRT23Q9C075 422 aa17.02■□□□□ 0.32
SHOX2-206ENST00000554685 ZSWIM6Q9HCJ5 1215 aa17.02■□□□□ 0.32
SHOX2-206ENST00000554685 ZNF70Q9UC06 446 aaPredicted RBP17.02■□□□□ 0.32
SHOX2-206ENST00000554685 LAMA4Q16363 1823 aa17.02■□□□□ 0.31
SHOX2-206ENST00000554685 ADAMTSL1Q8N6G6 1762 aa17.02■□□□□ 0.31
SHOX2-206ENST00000554685 NAV1Q8NEY1 1877 aa17.01■□□□□ 0.31
SHOX2-206ENST00000554685 COL2A1P02458 1487 aaPredicted RBP17.01■□□□□ 0.31
SHOX2-206ENST00000554685 WNT10BO00744 389 aa17.01■□□□□ 0.31
SHOX2-206ENST00000554685 DDNO94850 711 aaPredicted RBP17.01■□□□□ 0.31
SHOX2-206ENST00000554685 TNNI2P48788 182 aa17.01■□□□□ 0.31
SHOX2-206ENST00000554685 PDE4BQ07343 736 aa17.01■□□□□ 0.31
SHOX2-206ENST00000554685 TNFAIP1Q13829 316 aa17.01■□□□□ 0.31
SHOX2-206ENST00000554685 L3MBTL3Q96JM7 780 aaPredicted RBP17.01■□□□□ 0.31
SHOX2-206ENST00000554685 PCDHAC2Q9Y5I4 1007 aa17.01■□□□□ 0.31
SHOX2-206ENST00000554685 ROBO3Q96MS0 1386 aa17.01■□□□□ 0.31
SHOX2-206ENST00000554685 GLTPD2A6NH11 291 aa17■□□□□ 0.31
SHOX2-206ENST00000554685 MCM2P49736 904 aa17■□□□□ 0.31
SHOX2-206ENST00000554685 NEK4P51957 841 aa17■□□□□ 0.31
SHOX2-206ENST00000554685 CACNB1Q02641 598 aaPredicted RBP17■□□□□ 0.31
SHOX2-206ENST00000554685 BECN1Q14457 450 aa17■□□□□ 0.31
SHOX2-206ENST00000554685 ADCK5Q3MIX3 580 aa17■□□□□ 0.31
SHOX2-206ENST00000554685 RUFY3Q7L099 469 aa17■□□□□ 0.31
SHOX2-206ENST00000554685 FAM83AQ86UY5 434 aa17■□□□□ 0.31
SHOX2-206ENST00000554685 TBC1D10CQ8IV04 446 aa17■□□□□ 0.31
SHOX2-206ENST00000554685 DDX4Q9NQI0 724 aaKnown RBP17■□□□□ 0.31
SHOX2-206ENST00000554685 ADARB2Q9NS39 739 aaKnown RBP17■□□□□ 0.31
SHOX2-206ENST00000554685 SAP30BPQ9UHR5 308 aaKnown RBP17■□□□□ 0.31
SHOX2-206ENST00000554685 GOLGB1Q14789 3259 aaKnown RBP17■□□□□ 0.31
SHOX2-206ENST00000554685 WDR19Q8NEZ3 1342 aa16.99■□□□□ 0.31
SHOX2-206ENST00000554685 FOCADQ5VW36 1801 aa16.99■□□□□ 0.31
SHOX2-206ENST00000554685 CLRN2A0PK11 232 aa16.99■□□□□ 0.31
SHOX2-206ENST00000554685 RPS6KB1P23443 525 aa16.99■□□□□ 0.31
SHOX2-206ENST00000554685 CTDSPL2Q05D32 466 aa16.99■□□□□ 0.31
SHOX2-206ENST00000554685 NFIAQ12857 509 aa16.99■□□□□ 0.31
SHOX2-206ENST00000554685 TBC1D10BQ4KMP7 808 aaPredicted RBP16.99■□□□□ 0.31
SHOX2-206ENST00000554685 RBM26Q5T8P6 1007 aaKnown RBP16.99■□□□□ 0.31
SHOX2-206ENST00000554685 STOX1Q6ZVD7 989 aa16.99■□□□□ 0.31
SHOX2-206ENST00000554685 DHX32Q7L7V1 743 aaKnown RBP16.99■□□□□ 0.31
SHOX2-206ENST00000554685 SAMD7Q7Z3H4 446 aa16.99■□□□□ 0.31
SHOX2-206ENST00000554685 FAM151AQ8WW52 585 aa16.99■□□□□ 0.31
SHOX2-206ENST00000554685 SNX21Q969T3 373 aa16.99■□□□□ 0.31
SHOX2-206ENST00000554685 NBPF3Q9H094 633 aa16.99■□□□□ 0.31
SHOX2-206ENST00000554685 VEZTQ9HBM0 779 aa16.99■□□□□ 0.31
SHOX2-206ENST00000554685 FAM198AQ9UFP1 575 aa16.99■□□□□ 0.31
SHOX2-206ENST00000554685 LAMB1P07942 1786 aa16.99■□□□□ 0.31
SHOX2-206ENST00000554685 DDX60LQ5H9U9 1706 aaKnown RBP16.99■□□□□ 0.31
SHOX2-206ENST00000554685 SHTN1A0MZ66 631 aa16.98■□□□□ 0.31
SHOX2-206ENST00000554685 IQCA1LA6NCM1 817 aa16.98■□□□□ 0.31
SHOX2-206ENST00000554685 ORC4O43929 436 aa16.98■□□□□ 0.31
SHOX2-206ENST00000554685 MCM5P33992 734 aa16.98■□□□□ 0.31
SHOX2-206ENST00000554685 ANKRD1Q15327 319 aa16.98■□□□□ 0.31
SHOX2-206ENST00000554685 NBPF9Q3BBW0 867 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms