RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 TREML2Q5T2D2 321 aa8.38□□□□□ -1.07
PCNX4-208ENST00000554534 TBC1D9Q6ZT07 1266 aa8.38□□□□□ -1.07
PCNX4-208ENST00000554534 ANKRD13CQ8N6S4 541 aa8.38□□□□□ -1.07
PCNX4-208ENST00000554534 SLC17A8Q8NDX2 589 aa8.38□□□□□ -1.07
PCNX4-208ENST00000554534 WDR66Q8TBY9 1149 aa8.38□□□□□ -1.07
PCNX4-208ENST00000554534 PAWRQ96IZ0 340 aaKnown RBP8.38□□□□□ -1.07
PCNX4-208ENST00000554534 ABCF2Q9UG63 623 aa8.38□□□□□ -1.07
PCNX4-208ENST00000554534 ZMYND8Q9ULU4 1186 aaPredicted RBP8.38□□□□□ -1.07
PCNX4-208ENST00000554534 ALPK3Q96L96 1907 aa8.38□□□□□ -1.07
PCNX4-208ENST00000554534 A0A0C4DFX4 3053 aa8.37□□□□□ -1.07
PCNX4-208ENST00000554534 DLL1O00548 723 aa8.37□□□□□ -1.07
PCNX4-208ENST00000554534 SGPL1O95470 568 aa8.37□□□□□ -1.07
PCNX4-208ENST00000554534 SYN1P17600 705 aa8.37□□□□□ -1.07
PCNX4-208ENST00000554534 PTPRAP18433 802 aa8.37□□□□□ -1.07
PCNX4-208ENST00000554534 HOXD10P28358 340 aa8.37□□□□□ -1.07
PCNX4-208ENST00000554534 FCGRTP55899 365 aa8.37□□□□□ -1.07
PCNX4-208ENST00000554534 SHROOM1Q2M3G4 852 aaPredicted RBP8.37□□□□□ -1.07
PCNX4-208ENST00000554534 FKBP1CQ5VVH2 108 aa8.37□□□□□ -1.07
PCNX4-208ENST00000554534 PI16Q6UXB8 463 aa8.37□□□□□ -1.07
PCNX4-208ENST00000554534 Q7L0L9 218 aa8.37□□□□□ -1.07
PCNX4-208ENST00000554534 UBE2Q1Q7Z7E8 422 aa8.37□□□□□ -1.07
PCNX4-208ENST00000554534 LPIN2Q92539 896 aa8.37□□□□□ -1.07
PCNX4-208ENST00000554534 MRIQ9BWK5 157 aa8.37□□□□□ -1.07
PCNX4-208ENST00000554534 AFG3L2Q9Y4W6 797 aa8.37□□□□□ -1.07
PCNX4-208ENST00000554534 LRRFIP2Q9Y608 721 aaKnown RBP8.37□□□□□ -1.07
PCNX4-208ENST00000554534 COL6A3P12111 3177 aa8.37□□□□□ -1.07
PCNX4-208ENST00000554534 PHIPQ8WWQ0 1821 aa8.36□□□□□ -1.07
PCNX4-208ENST00000554534 TNPO2O14787 897 aaKnown RBP8.36□□□□□ -1.07
PCNX4-208ENST00000554534 EVI5O60447 810 aa8.36□□□□□ -1.07
PCNX4-208ENST00000554534 BTDP43251 543 aa8.36□□□□□ -1.07
PCNX4-208ENST00000554534 UBXN2AP68543 259 aa8.36□□□□□ -1.07
PCNX4-208ENST00000554534 C7orf61Q8IZ16 206 aa8.36□□□□□ -1.07
PCNX4-208ENST00000554534 SCYL3Q8IZE3 742 aa8.36□□□□□ -1.07
PCNX4-208ENST00000554534 HOOK2Q96ED9 719 aa8.36□□□□□ -1.07
PCNX4-208ENST00000554534 PARK7Q99497 189 aaKnown RBP8.36□□□□□ -1.07
PCNX4-208ENST00000554534 PICK1Q9NRD5 415 aa8.36□□□□□ -1.07
PCNX4-208ENST00000554534 CEP126Q9P2H0 1117 aa8.36□□□□□ -1.07
PCNX4-208ENST00000554534 TNNQ9UQP3 1299 aa8.36□□□□□ -1.07
PCNX4-208ENST00000554534 DOCK2Q92608 1830 aa8.36□□□□□ -1.07
PCNX4-208ENST00000554534 MAST3O60307 1309 aa8.35□□□□□ -1.07
PCNX4-208ENST00000554534 PTPRFP10586 1907 aa8.35□□□□□ -1.07
PCNX4-208ENST00000554534 A0A0G2JLL6 359 aaPredicted RBP8.35□□□□□ -1.07
PCNX4-208ENST00000554534 CXCL11O14625 94 aa8.35□□□□□ -1.07
PCNX4-208ENST00000554534 GNRH1P01148 92 aa8.35□□□□□ -1.07
PCNX4-208ENST00000554534 PRMT2P55345 433 aa8.35□□□□□ -1.07
PCNX4-208ENST00000554534 JAG1P78504 1218 aa8.35□□□□□ -1.07
PCNX4-208ENST00000554534 TFCP2Q12800 502 aa8.35□□□□□ -1.07
PCNX4-208ENST00000554534 SPP2Q13103 211 aa8.35□□□□□ -1.07
PCNX4-208ENST00000554534 NOL9Q5SY16 702 aaKnown RBP8.35□□□□□ -1.07
PCNX4-208ENST00000554534 CCDC102BQ68D86 513 aa8.35□□□□□ -1.07
PCNX4-208ENST00000554534 PRRT2Q7Z6L0 340 aaPredicted RBP8.35□□□□□ -1.07
PCNX4-208ENST00000554534 SMCR8Q8TEV9 937 aaPredicted RBP8.35□□□□□ -1.07
PCNX4-208ENST00000554534 ZNF384Q8TF68 577 aa8.35□□□□□ -1.07
PCNX4-208ENST00000554534 NEUROD6Q96NK8 337 aa8.35□□□□□ -1.07
PCNX4-208ENST00000554534 HTATIP2Q9BUP3 242 aa8.35□□□□□ -1.07
PCNX4-208ENST00000554534 PRO3102Q9H379 93 aa8.35□□□□□ -1.07
PCNX4-208ENST00000554534 ZCCHC17Q9NP64 241 aaKnown RBP8.35□□□□□ -1.07
PCNX4-208ENST00000554534 NOB1Q9ULX3 412 aaKnown RBP8.35□□□□□ -1.07
PCNX4-208ENST00000554534 ATRNL1Q5VV63 1379 aa8.35□□□□□ -1.07
PCNX4-208ENST00000554534 UBTFL1P0CB47 393 aaPredicted RBP8.34□□□□□ -1.07
PCNX4-208ENST00000554534 CYP2B6P20813 491 aa8.34□□□□□ -1.07
PCNX4-208ENST00000554534 HMGCS2P54868 508 aa8.34□□□□□ -1.07
PCNX4-208ENST00000554534 MECOMQ03112 1051 aa8.34□□□□□ -1.07
PCNX4-208ENST00000554534 RASGRF1Q13972 1273 aa8.34□□□□□ -1.07
PCNX4-208ENST00000554534 FASTKD5Q7L8L6 764 aaKnown RBP8.34□□□□□ -1.07
PCNX4-208ENST00000554534 DZIP1Q86YF9 867 aaKnown RBP8.34□□□□□ -1.07
PCNX4-208ENST00000554534 SLAIN1Q8ND83 568 aa8.34□□□□□ -1.07
PCNX4-208ENST00000554534 MEIS3Q99687 375 aa8.34□□□□□ -1.07
PCNX4-208ENST00000554534 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.34□□□□□ -1.07
PCNX4-208ENST00000554534 SNRKQ9NRH2 765 aa8.34□□□□□ -1.07
PCNX4-208ENST00000554534 SMC4Q9NTJ3 1288 aa8.34□□□□□ -1.07
PCNX4-208ENST00000554534 GNL3LQ9NVN8 582 aaKnown RBP8.34□□□□□ -1.07
PCNX4-208ENST00000554534 SUGT1Q9Y2Z0 365 aa8.34□□□□□ -1.07
PCNX4-208ENST00000554534 NR2E3Q9Y5X4 410 aa8.34□□□□□ -1.07
PCNX4-208ENST00000554534 NDUFB9Q9Y6M9 179 aa8.34□□□□□ -1.07
PCNX4-208ENST00000554534 DOCK1Q14185 1865 aa8.33□□□□□ -1.08
PCNX4-208ENST00000554534 NCBP3Q53F19 620 aaKnown RBP8.33□□□□□ -1.08
PCNX4-208ENST00000554534 NKX2-3Q8TAU0 364 aa8.33□□□□□ -1.08
PCNX4-208ENST00000554534 XAGE2Q96GT9 111 aa8.33□□□□□ -1.08
PCNX4-208ENST00000554534 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.33□□□□□ -1.08
PCNX4-208ENST00000554534 DENND2AQ9ULE3 1009 aa8.33□□□□□ -1.08
PCNX4-208ENST00000554534 ATAD5Q96QE3 1844 aa8.33□□□□□ -1.08
PCNX4-208ENST00000554534 RPAP1Q9BWH6 1393 aaPredicted RBP8.33□□□□□ -1.08
PCNX4-208ENST00000554534 ZNF521Q96K83 1311 aa8.32□□□□□ -1.08
PCNX4-208ENST00000554534 LAMA3Q16787 3333 aa8.32□□□□□ -1.08
PCNX4-208ENST00000554534 PLXNB2O15031 1838 aa8.32□□□□□ -1.08
PCNX4-208ENST00000554534 A0A1B0GUL7 405 aa8.32□□□□□ -1.08
PCNX4-208ENST00000554534 CTNND1O60716 968 aaKnown RBP8.32□□□□□ -1.08
PCNX4-208ENST00000554534 ENTPD3O75355 529 aa8.32□□□□□ -1.08
PCNX4-208ENST00000554534 GDF11O95390 407 aa8.32□□□□□ -1.08
PCNX4-208ENST00000554534 MNX1P50219 401 aaPredicted RBP8.32□□□□□ -1.08
PCNX4-208ENST00000554534 RHBDL3P58872 404 aa8.32□□□□□ -1.08
PCNX4-208ENST00000554534 SLFN5Q08AF3 891 aa8.32□□□□□ -1.08
PCNX4-208ENST00000554534 SH3RF3Q8TEJ3 882 aaPredicted RBP8.32□□□□□ -1.08
PCNX4-208ENST00000554534 COA7Q96BR5 231 aa8.32□□□□□ -1.08
PCNX4-208ENST00000554534 P2RX7Q99572 595 aaKnown RBP8.32□□□□□ -1.08
PCNX4-208ENST00000554534 IDI2Q9BXS1 227 aa8.32□□□□□ -1.08
PCNX4-208ENST00000554534 ASCC2Q9H1I8 757 aaPredicted RBP8.32□□□□□ -1.08
PCNX4-208ENST00000554534 RAI14Q9P0K7 980 aa8.32□□□□□ -1.08
PCNX4-208ENST00000554534 HMG20BQ9P0W2 317 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms