RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 AKNAD1Q5T1N1 836 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 CTR9Q6PD62 1173 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 STOX1Q6ZVD7 989 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 RALYLQ86SE5 291 aaKnown RBP9.07□□□□□ -0.96
TDP1-209ENST00000554180 TBC1D10CQ8IV04 446 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 NCOA7Q8NI08 942 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 TTC14Q96N46 770 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 IDI2Q9BXS1 227 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 UPF3BQ9BZI7 483 aaKnown RBP9.07□□□□□ -0.96
TDP1-209ENST00000554180 NBPF3Q9H094 633 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 MCM9Q9NXL9 1143 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 TAF6LQ9Y6J9 622 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 DDX60LQ5H9U9 1706 aaKnown RBP9.06□□□□□ -0.96
TDP1-209ENST00000554180 USP17L12C9JPN9 530 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 USP17L21D6R901 530 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 K7ELQ4 463 aaPredicted RBP9.06□□□□□ -0.96
TDP1-209ENST00000554180 WDHD1O75717 1129 aaPredicted RBP9.06□□□□□ -0.96
TDP1-209ENST00000554180 FGRP09769 529 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 RBM5P52756 815 aaKnown RBP eCLIP9.06□□□□□ -0.96
TDP1-209ENST00000554180 HAND2P61296 217 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 ANKRD1Q15327 319 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 DLGAP5Q15398 846 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 FKBP1CQ5VVH2 108 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 CDC42EP5Q6NZY7 148 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 MFSD6Q6ZSS7 791 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 DHX32Q7L7V1 743 aaKnown RBP9.06□□□□□ -0.96
TDP1-209ENST00000554180 GPC2Q8N158 579 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 FBXL16Q8N461 479 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 TGFBRAP1Q8WUH2 860 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 ZBED3Q96IU2 234 aaPredicted RBP9.06□□□□□ -0.96
TDP1-209ENST00000554180 MTA3Q9BTC8 594 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 TBC1D2Q9BYX2 928 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 KRT23Q9C075 422 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 PDRG1Q9NUG6 133 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 USP40Q9NVE5 1235 aa9.06□□□□□ -0.96
TDP1-209ENST00000554180 DAXXQ9UER7 740 aaPredicted RBP9.06□□□□□ -0.96
TDP1-209ENST00000554180 COL2A1P02458 1487 aaPredicted RBP9.06□□□□□ -0.96
TDP1-209ENST00000554180 ZNF541Q9H0D2 1346 aa9.05□□□□□ -0.96
TDP1-209ENST00000554180 DICER1Q9UPY3 1922 aaKnown RBP9.05□□□□□ -0.96
TDP1-209ENST00000554180 ORC4O43929 436 aa9.05□□□□□ -0.96
TDP1-209ENST00000554180 ENTPD3O75355 529 aa9.05□□□□□ -0.96
TDP1-209ENST00000554180 MCM5P33992 734 aa9.05□□□□□ -0.96
TDP1-209ENST00000554180 EXOSC10Q01780 885 aaKnown RBP9.05□□□□□ -0.96
TDP1-209ENST00000554180 PDE4BQ07343 736 aa9.05□□□□□ -0.96
TDP1-209ENST00000554180 GPR162Q16538 588 aa9.05□□□□□ -0.96
TDP1-209ENST00000554180 C12orf60Q5U649 245 aa9.05□□□□□ -0.96
TDP1-209ENST00000554180 TTC6Q86TZ1 520 aa9.05□□□□□ -0.96
TDP1-209ENST00000554180 MAPKAPK5Q8IW41 473 aa9.05□□□□□ -0.96
TDP1-209ENST00000554180 MB21D2Q8IYB1 491 aaPredicted RBP9.05□□□□□ -0.96
TDP1-209ENST00000554180 AGXT2Q9BYV1 514 aa9.05□□□□□ -0.96
TDP1-209ENST00000554180 DHX36Q9H2U1 1008 aaKnown RBP9.05□□□□□ -0.96
TDP1-209ENST00000554180 ZNF287Q9HBT7 754 aa9.05□□□□□ -0.96
TDP1-209ENST00000554180 TMOD2Q9NZR1 351 aa9.05□□□□□ -0.96
TDP1-209ENST00000554180 RNF181Q9P0P0 153 aa9.05□□□□□ -0.96
TDP1-209ENST00000554180 ZBTB12Q9Y330 459 aaPredicted RBP9.05□□□□□ -0.96
TDP1-209ENST00000554180 NEDD4P46934 1319 aa9.05□□□□□ -0.96
TDP1-209ENST00000554180 NAV1Q8NEY1 1877 aa9.04□□□□□ -0.96
TDP1-209ENST00000554180 ATRNL1Q5VV63 1379 aa9.04□□□□□ -0.96
TDP1-209ENST00000554180 MINDY4BA8MYZ0 360 aa9.04□□□□□ -0.96
TDP1-209ENST00000554180 MYO1BO43795 1136 aa9.04□□□□□ -0.96
TDP1-209ENST00000554180 CD2BP2O95400 341 aaKnown RBP9.04□□□□□ -0.96
TDP1-209ENST00000554180 GMPSP49915 693 aaPredicted RBP9.04□□□□□ -0.96
TDP1-209ENST00000554180 AK2P54819 239 aa9.04□□□□□ -0.96
TDP1-209ENST00000554180 CTDSPL2Q05D32 466 aa9.04□□□□□ -0.96
TDP1-209ENST00000554180 SPDYE2Q495Y8 402 aa9.04□□□□□ -0.96
TDP1-209ENST00000554180 ESR2Q92731 530 aa9.04□□□□□ -0.96
TDP1-209ENST00000554180 OSBPL5Q9H0X9 879 aaPredicted RBP9.04□□□□□ -0.96
TDP1-209ENST00000554180 EHD4Q9H223 541 aa9.04□□□□□ -0.96
TDP1-209ENST00000554180 MYOZ2Q9NPC6 264 aa9.04□□□□□ -0.96
TDP1-209ENST00000554180 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.04□□□□□ -0.96
TDP1-209ENST00000554180 LAMB1P07942 1786 aa9.04□□□□□ -0.96
TDP1-209ENST00000554180 FOCADQ5VW36 1801 aa9.03□□□□□ -0.96
TDP1-209ENST00000554180 H7C1D1 291 aa9.03□□□□□ -0.96
TDP1-209ENST00000554180 WNT10BO00744 389 aa9.03□□□□□ -0.96
TDP1-209ENST00000554180 POLR3DP05423 398 aaPredicted RBP9.03□□□□□ -0.96
TDP1-209ENST00000554180 HLA-DOAP06340 250 aa9.03□□□□□ -0.96
TDP1-209ENST00000554180 SART3Q15020 963 aaKnown RBP9.03□□□□□ -0.96
TDP1-209ENST00000554180 C9orf131Q5VYM1 1079 aa9.03□□□□□ -0.96
TDP1-209ENST00000554180 C16orf86Q6ZW13 317 aa9.03□□□□□ -0.96
TDP1-209ENST00000554180 MICALL2Q8IY33 904 aa9.03□□□□□ -0.96
TDP1-209ENST00000554180 TMEM87BQ96K49 555 aa9.03□□□□□ -0.96
TDP1-209ENST00000554180 PRMT6Q96LA8 375 aaPredicted RBP9.03□□□□□ -0.96
TDP1-209ENST00000554180 ZSCAN31Q96LW9 406 aaPredicted RBP9.03□□□□□ -0.96
TDP1-209ENST00000554180 DDX4Q9NQI0 724 aaKnown RBP9.03□□□□□ -0.96
TDP1-209ENST00000554180 SH2B1Q9NRF2 756 aaPredicted RBP9.03□□□□□ -0.96
TDP1-209ENST00000554180 GPRC5DQ9NZD1 345 aa9.03□□□□□ -0.96
TDP1-209ENST00000554180 ZNF70Q9UC06 446 aaPredicted RBP9.03□□□□□ -0.96
TDP1-209ENST00000554180 SWAP70Q9UH65 585 aa9.03□□□□□ -0.96
TDP1-209ENST00000554180 LIMCH1Q9UPQ0 1083 aa9.03□□□□□ -0.96
TDP1-209ENST00000554180 GJA3Q9Y6H8 435 aa9.03□□□□□ -0.96
TDP1-209ENST00000554180 SBF1O95248 1867 aa9.02□□□□□ -0.96
TDP1-209ENST00000554180 ADAMTSL1Q8N6G6 1762 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 CYP2D7A0A087X1C5 515 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 B4E1Z4 1266 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 PRC1O43663 620 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 KDM4AO75164 1064 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 CYP2D6P10635 497 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 CPA1P15085 419 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 EVCP57679 992 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 ANTXR2P58335 489 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms