RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-209ENST00000553889 ME1P48163 572 aa10.71□□□□□ -0.69
PRKCH-209ENST00000553889 ZNF75DP51815 510 aa10.71□□□□□ -0.69
PRKCH-209ENST00000553889 PPARAQ07869 468 aa10.71□□□□□ -0.69
PRKCH-209ENST00000553889 SSRP1Q08945 709 aaKnown RBP10.71□□□□□ -0.69
PRKCH-209ENST00000553889 DHX8Q14562 1220 aaKnown RBP10.71□□□□□ -0.69
PRKCH-209ENST00000553889 STK38Q15208 465 aa10.71□□□□□ -0.69
PRKCH-209ENST00000553889 PTPAQ15257 358 aa10.71□□□□□ -0.69
PRKCH-209ENST00000553889 CAMK4Q16566 473 aa10.71□□□□□ -0.69
PRKCH-209ENST00000553889 FAM98CQ17RN3 349 aaKnown RBP10.71□□□□□ -0.69
PRKCH-209ENST00000553889 SBK1Q52WX2 424 aa10.71□□□□□ -0.69
PRKCH-209ENST00000553889 TPTE2Q6XPS3 522 aa10.71□□□□□ -0.69
PRKCH-209ENST00000553889 CASZ1Q86V15 1759 aa10.71□□□□□ -0.69
PRKCH-209ENST00000553889 VPS37DQ86XT2 251 aa10.71□□□□□ -0.69
PRKCH-209ENST00000553889 NKX2-3Q8TAU0 364 aa10.71□□□□□ -0.69
PRKCH-209ENST00000553889 ESR2Q92731 530 aa10.71□□□□□ -0.69
PRKCH-209ENST00000553889 NLRP3Q96P20 1036 aa10.71□□□□□ -0.69
PRKCH-209ENST00000553889 FOXP1Q9H334 677 aaPredicted RBP10.71□□□□□ -0.69
PRKCH-209ENST00000553889 SLC12A7Q9Y666 1083 aa10.71□□□□□ -0.69
PRKCH-209ENST00000553889 DUOX1Q9NRD9 1551 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 NUTM2BA6NNL0 878 aaPredicted RBP10.7□□□□□ -0.7
PRKCH-209ENST00000553889 NUTM2EB1AL46 878 aaPredicted RBP10.7□□□□□ -0.7
PRKCH-209ENST00000553889 SNAP23O00161 211 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 MYO1BO43795 1136 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 NEMFO60524 1076 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 CUTAO60888 179 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 DEXIO95424 95 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 TDO2P48775 406 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 WTAPQ15007 396 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 TBC1D9BQ66K14 1250 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 C3orf67Q6ZVT6 689 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 NBPF11Q86T75 865 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 CERS3Q8IU89 383 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 NUTM2AQ8IVF1 878 aaPredicted RBP10.7□□□□□ -0.7
PRKCH-209ENST00000553889 CKAP2LQ8IYA6 745 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 FAM177A1Q8N128 213 aaPredicted RBP10.7□□□□□ -0.7
PRKCH-209ENST00000553889 CRACR2BQ8N4Y2 399 aaPredicted RBP10.7□□□□□ -0.7
PRKCH-209ENST00000553889 KIAA1524Q8TCG1 905 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 SETDB2Q96T68 719 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 MAP3K14Q99558 947 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.7□□□□□ -0.7
PRKCH-209ENST00000553889 RNF26Q9BY78 433 aaPredicted RBP10.7□□□□□ -0.7
PRKCH-209ENST00000553889 FTOQ9C0B1 505 aaKnown RBP eCLIP10.7□□□□□ -0.7
PRKCH-209ENST00000553889 NAT10Q9H0A0 1025 aaKnown RBP10.7□□□□□ -0.7
PRKCH-209ENST00000553889 ATP8A2Q9NTI2 1148 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 KIAA1468Q9P260 1216 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 NAP1L2Q9ULW6 460 aaPredicted RBP10.7□□□□□ -0.7
PRKCH-209ENST00000553889 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.7□□□□□ -0.7
PRKCH-209ENST00000553889 CLIC4Q9Y696 253 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 TAF1LQ8IZX4 1826 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 MAST2Q6P0Q8 1798 aa10.7□□□□□ -0.7
PRKCH-209ENST00000553889 ERICH2A1L162 156 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 PRKAB2O43741 272 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 MMP1P03956 469 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 CALM1P0DP23 149 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 CALM2P0DP24 149 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 CALM3P0DP25 149 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 GUCY1B3Q02153 619 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 CTDSPL2Q05D32 466 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 TRIM29Q14134 588 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 RTN1Q16799 776 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 RESP18Q5W5W9 173 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 SPTY2D1Q68D10 685 aaPredicted RBP10.69□□□□□ -0.7
PRKCH-209ENST00000553889 OTUD7BQ6GQQ9 843 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 TRIM22Q8IYM9 498 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 CEP57L1Q8IYX8 460 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 ZNF579Q8NAF0 562 aaKnown RBP10.69□□□□□ -0.7
PRKCH-209ENST00000553889 FANCBQ8NB91 859 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 ZNF384Q8TF68 577 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 CELF1Q92879 486 aaKnown RBP10.69□□□□□ -0.7
PRKCH-209ENST00000553889 NSUN4Q96CB9 384 aaKnown RBP10.69□□□□□ -0.7
PRKCH-209ENST00000553889 NGLY1Q96IV0 654 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 SENP2Q9HC62 589 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 TUBE1Q9UJT0 475 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 LEMD3Q9Y2U8 911 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 RTCBQ9Y3I0 505 aaKnown RBP10.69□□□□□ -0.7
PRKCH-209ENST00000553889 DLEC1Q9Y238 1755 aa10.69□□□□□ -0.7
PRKCH-209ENST00000553889 IKBKBO14920 756 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 ZPR1O75312 459 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 DDAH1O94760 285 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 ZNF202O95125 648 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 HIBADHP31937 336 aaKnown RBP10.68□□□□□ -0.7
PRKCH-209ENST00000553889 GYG1P46976 350 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 FUT2Q10981 343 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 NOLC1Q14978 699 aaKnown RBP eCLIP10.68□□□□□ -0.7
PRKCH-209ENST00000553889 SF3A1Q15459 793 aaKnown RBP10.68□□□□□ -0.7
PRKCH-209ENST00000553889 RILPL1Q5EBL4 403 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 NFXL1Q6ZNB6 911 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 ADGRA1Q86SQ6 560 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 LUZP1Q86V48 1076 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 MICU3Q86XE3 530 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 NOSTRINQ8IVI9 506 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 ZNF654Q8IZM8 581 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 CERKQ8TCT0 537 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 ANKS1AQ92625 1134 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 DNAJC25Q9H1X3 360 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 KCND1Q9NSA2 647 aa10.68□□□□□ -0.7
PRKCH-209ENST00000553889 RBM28Q9NW13 759 aaKnown RBP10.68□□□□□ -0.7
PRKCH-209ENST00000553889 FAM177BA6PVY3 158 aa10.67□□□□□ -0.7
PRKCH-209ENST00000553889 PRPF3O43395 683 aaKnown RBP10.67□□□□□ -0.7
PRKCH-209ENST00000553889 BMP15O95972 392 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms