RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 FILIP1Q7Z7B0 1213 aa14.13□□□□□ -0.15
SHMT2-207ENST00000553837 AIFM3Q96NN9 605 aa14.13□□□□□ -0.15
SHMT2-207ENST00000553837 ARGLU1Q9NWB6 273 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-207ENST00000553837 CLIC4Q9Y696 253 aa14.13□□□□□ -0.15
SHMT2-207ENST00000553837 LOC102724428A0A0B4J2F2 783 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 B4E1Z4 1266 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 UQCRFS1P1P0C7P4 283 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 PNMA6AP0CW24 399 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-207ENST00000553837 SIK1P57059 783 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 ERCC6LQ2NKX8 1250 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 FBXO18Q8NFZ0 1043 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 ERCC4Q92889 916 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-207ENST00000553837 C8orf76Q96K31 380 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 ZNF396Q96N95 335 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-207ENST00000553837 UTP14AQ9BVJ6 771 aaKnown RBP14.12□□□□□ -0.15
SHMT2-207ENST00000553837 PCDHA7Q9UN72 937 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 PHLPP1O60346 1717 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 NRAPQ86VF7 1730 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 WDR19Q8NEZ3 1342 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 SH2B2O14492 632 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-207ENST00000553837 CTAGE5O15320 804 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 NTSR2O95665 410 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 CLCN6P51797 869 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 RAD51AP2Q09MP3 1159 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 C11orf57Q6ZUT1 292 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-207ENST00000553837 MAGEB6Q8N7X4 407 aa14.12□□□□□ -0.15
SHMT2-207ENST00000553837 WTIPA6NIX2 430 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-207ENST00000553837 BECN2A8MW95 431 aa14.11□□□□□ -0.15
SHMT2-207ENST00000553837 CDC27P30260 824 aa14.11□□□□□ -0.15
SHMT2-207ENST00000553837 PLA2G4AP47712 749 aa14.11□□□□□ -0.15
SHMT2-207ENST00000553837 ME1P48163 572 aa14.11□□□□□ -0.15
SHMT2-207ENST00000553837 BCAMP50895 628 aa14.11□□□□□ -0.15
SHMT2-207ENST00000553837 MAPK8IP2Q13387 824 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-207ENST00000553837 STX1AQ16623 288 aa14.11□□□□□ -0.15
SHMT2-207ENST00000553837 AK7Q96M32 723 aa14.11□□□□□ -0.15
SHMT2-207ENST00000553837 RTEL1Q9NZ71 1219 aa14.11□□□□□ -0.15
SHMT2-207ENST00000553837 ANGEL1Q9UNK9 670 aaKnown RBP14.11□□□□□ -0.15
SHMT2-207ENST00000553837 RREB1Q92766 1687 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 DOCK2Q92608 1830 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 UBE2Q2LH0YL09 131 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 ATP8B1O43520 1251 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 KCNQ2O43526 872 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 PRKAB2O43741 272 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 SLC5A1P13866 664 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 CTDSPL2Q05D32 466 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 CCDC93Q567U6 631 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 MUM1L1Q5H9M0 696 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 ATL3Q6DD88 541 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 TMCO3Q6UWJ1 677 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 CERS3Q8IU89 383 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 FSIP1Q8NA03 581 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 LINC00301Q8NCQ3 95 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 IGDCC4Q8TDY8 1250 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 TRERF1Q96PN7 1200 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 ARMT1Q9H993 441 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 MBD4O95243 580 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 GPS2Q13227 327 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 DHX8Q14562 1220 aaKnown RBP14.1□□□□□ -0.15
SHMT2-207ENST00000553837 AIDAQ96BJ3 306 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 MPHOSPH8Q99549 860 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 IMPACTQ9P2X3 320 aa14.1□□□□□ -0.15
SHMT2-207ENST00000553837 A0A1B0GVL5 298 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 CPLX1O14810 134 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 TNNT3P45378 269 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-207ENST00000553837 KIF23Q02241 960 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-207ENST00000553837 FAM160A1Q05DH4 1040 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 ARHGAP29Q52LW3 1261 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 C3orf67Q6ZVT6 689 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 IFNL3Q8IZI9 196 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 FMR1NBQ8N0W7 255 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-207ENST00000553837 MYL10Q9BUA6 226 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 FAM217BQ9NTX9 383 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-207ENST00000553837 NIP7Q9Y221 180 aaKnown RBP eCLIP14.09□□□□□ -0.15
SHMT2-207ENST00000553837 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.09□□□□□ -0.15
SHMT2-207ENST00000553837 ZMYM6O95789 1325 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 PSDA5PKW4 1024 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-207ENST00000553837 GSG1L2A8MUP6 293 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 PATL2C9JE40 543 aaKnown RBP14.09□□□□□ -0.15
SHMT2-207ENST00000553837 DHX16O60231 1041 aaKnown RBP14.09□□□□□ -0.15
SHMT2-207ENST00000553837 ZRANB2O95218 330 aaKnown RBP eCLIP14.09□□□□□ -0.151e-7■□□□□ 9.4
SHMT2-207ENST00000553837 TPM1P09493 284 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 TRDNQ13061 729 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 ALX1Q15699 326 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 MYSM1Q5VVJ2 828 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 APOA5Q6Q788 366 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 PHKBQ93100 1093 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 LY9Q9HBG7 655 aa14.09□□□□□ -0.15
SHMT2-207ENST00000553837 BCL9LQ86UU0 1499 aa14.08□□□□□ -0.16
SHMT2-207ENST00000553837 NDUFA8P51970 172 aa14.08□□□□□ -0.16
SHMT2-207ENST00000553837 NTRK3Q16288 839 aa14.08□□□□□ -0.16
SHMT2-207ENST00000553837 SAMD1Q6SPF0 538 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-207ENST00000553837 CCDC73Q6ZRK6 1079 aa14.08□□□□□ -0.16
SHMT2-207ENST00000553837 SMIM5Q71RC9 77 aa14.08□□□□□ -0.16
SHMT2-207ENST00000553837 LCORLQ8N3X6 602 aa14.08□□□□□ -0.16
SHMT2-207ENST00000553837 CHMP4CQ96CF2 233 aa14.08□□□□□ -0.16
SHMT2-207ENST00000553837 OSBPL5Q9H0X9 879 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-207ENST00000553837 ECM29Q5VYK3 1845 aa14.08□□□□□ -0.16
SHMT2-207ENST00000553837 RANBP6O60518 1105 aaKnown RBP14.07□□□□□ -0.16
SHMT2-207ENST00000553837 METAP2P50579 478 aaKnown RBP eCLIP14.07□□□□□ -0.161e-6■■■□□ 16.1
SHMT2-207ENST00000553837 KCNQ4P56696 695 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms