RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 NPHS2Q9NP85 383 aa7.4□□□□□ -1.22
FCF1-204ENST00000553673 VAV3Q9UKW4 847 aa7.4□□□□□ -1.22
FCF1-204ENST00000553673 ID3Q02535 119 aa7.39□□□□□ -1.23
FCF1-204ENST00000553673 PRKCQQ04759 706 aa7.39□□□□□ -1.23
FCF1-204ENST00000553673 SMYD4Q8IYR2 804 aaPredicted RBP7.39□□□□□ -1.23
FCF1-204ENST00000553673 TMEM40Q8WWA1 233 aa7.39□□□□□ -1.23
FCF1-204ENST00000553673 LEFTY1O75610 366 aa7.38□□□□□ -1.23
FCF1-204ENST00000553673 NEFLP07196 543 aa7.38□□□□□ -1.23
FCF1-204ENST00000553673 ZNF157P51786 506 aaPredicted RBP7.38□□□□□ -1.23
FCF1-204ENST00000553673 IFI16Q16666 785 aaKnown RBP7.38□□□□□ -1.23
FCF1-204ENST00000553673 ARHGAP27Q6ZUM4 889 aa7.38□□□□□ -1.23
FCF1-204ENST00000553673 ABCB6Q9NP58 842 aa7.38□□□□□ -1.23
FCF1-204ENST00000553673 ZNF862O60290 1169 aa7.37□□□□□ -1.23
FCF1-204ENST00000553673 SLFN14P0C7P3 912 aa7.37□□□□□ -1.23
FCF1-204ENST00000553673 PTPN12Q05209 780 aaKnown RBP7.37□□□□□ -1.23
FCF1-204ENST00000553673 ORC1Q13415 861 aa7.37□□□□□ -1.23
FCF1-204ENST00000553673 TTLL4Q14679 1199 aa7.37□□□□□ -1.23
FCF1-204ENST00000553673 AOC3Q16853 763 aa7.37□□□□□ -1.23
FCF1-204ENST00000553673 HRASLS5Q96KN8 279 aa7.37□□□□□ -1.23
FCF1-204ENST00000553673 FAM129BQ96TA1 746 aa7.37□□□□□ -1.23
FCF1-204ENST00000553673 DISC1Q9NRI5 854 aa7.37□□□□□ -1.23
FCF1-204ENST00000553673 RNGTTO60942 597 aaKnown RBP7.36□□□□□ -1.23
FCF1-204ENST00000553673 CEACAM5P06731 702 aa7.36□□□□□ -1.23
FCF1-204ENST00000553673 HCLS1P14317 486 aaPredicted RBP7.36□□□□□ -1.23
FCF1-204ENST00000553673 ERCC3P19447 782 aa7.36□□□□□ -1.23
FCF1-204ENST00000553673 ASB16Q96NS5 453 aa7.36□□□□□ -1.23
FCF1-204ENST00000553673 SLC38A3Q99624 504 aa7.36□□□□□ -1.23
FCF1-204ENST00000553673 KRTAP4-2Q9BYR5 136 aa7.36□□□□□ -1.23
FCF1-204ENST00000553673 CPNE3O75131 537 aaKnown RBP7.35□□□□□ -1.23
FCF1-204ENST00000553673 OXCT1P55809 520 aa7.35□□□□□ -1.23
FCF1-204ENST00000553673 FAAP100Q0VG06 881 aa7.35□□□□□ -1.23
FCF1-204ENST00000553673 KIF4BQ2VIQ3 1234 aa7.35□□□□□ -1.23
FCF1-204ENST00000553673 RPS26P11Q5JNZ5 115 aaPredicted RBP7.35□□□□□ -1.23
FCF1-204ENST00000553673 TMC7Q7Z402 723 aa7.35□□□□□ -1.23
FCF1-204ENST00000553673 ALKBH8Q96BT7 664 aaKnown RBP7.35□□□□□ -1.23
FCF1-204ENST00000553673 DUSP23Q9BVJ7 150 aa7.35□□□□□ -1.23
FCF1-204ENST00000553673 MKNK2Q9HBH9 465 aa7.35□□□□□ -1.23
FCF1-204ENST00000553673 PLAGL2Q9UPG8 496 aa7.35□□□□□ -1.23
FCF1-204ENST00000553673 PCDHGC5Q9Y5F6 944 aa7.35□□□□□ -1.23
FCF1-204ENST00000553673 TMEM265A0A087WTH1 108 aa7.34□□□□□ -1.23
FCF1-204ENST00000553673 GSTP1P09211 210 aaKnown RBP7.34□□□□□ -1.23
FCF1-204ENST00000553673 ITIH2P19823 946 aa7.34□□□□□ -1.23
FCF1-204ENST00000553673 ANGEL2Q5VTE6 544 aaKnown RBP7.34□□□□□ -1.23
FCF1-204ENST00000553673 PRPF40BQ6NWY9 871 aaKnown RBP7.34□□□□□ -1.23
FCF1-204ENST00000553673 TMEM238LA0A1B0GVL6 79 aa7.33□□□□□ -1.24
FCF1-204ENST00000553673 MFAP1P55081 439 aaKnown RBP7.33□□□□□ -1.24
FCF1-204ENST00000553673 MESP2Q0VG99 397 aa7.33□□□□□ -1.24
FCF1-204ENST00000553673 PRDM7Q9NQW5 492 aa7.33□□□□□ -1.24
FCF1-204ENST00000553673 KRT82Q9NSB4 513 aa7.33□□□□□ -1.24
FCF1-204ENST00000553673 PCOLCE2Q9UKZ9 415 aa7.33□□□□□ -1.24
FCF1-204ENST00000553673 LRRC10BA6NIK2 292 aa7.32□□□□□ -1.24
FCF1-204ENST00000553673 TREHO43280 583 aa7.32□□□□□ -1.24
FCF1-204ENST00000553673 GADD45BO75293 160 aaPredicted RBP7.32□□□□□ -1.24
FCF1-204ENST00000553673 NEFMP07197 916 aa7.32□□□□□ -1.24
FCF1-204ENST00000553673 HNRNPUQ00839 825 aaKnown RBP eCLIP7.32□□□□□ -1.24
FCF1-204ENST00000553673 PLCB3Q01970 1234 aa7.32□□□□□ -1.24
FCF1-204ENST00000553673 SLC23A3Q6PIS1 610 aa7.32□□□□□ -1.24
FCF1-204ENST00000553673 TOP6BLQ8N6T0 577 aa7.32□□□□□ -1.24
FCF1-204ENST00000553673 CCDC74AQ96AQ1 378 aa7.32□□□□□ -1.24
FCF1-204ENST00000553673 FAM84AQ96KN4 292 aa7.32□□□□□ -1.24
FCF1-204ENST00000553673 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.32□□□□□ -1.24
FCF1-204ENST00000553673 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
FCF1-204ENST00000553673 GPR182O15218 404 aa7.31□□□□□ -1.24
FCF1-204ENST00000553673 IGHA2P01877 340 aa7.31□□□□□ -1.24
FCF1-204ENST00000553673 ZSWIM9Q86XI8 627 aa7.31□□□□□ -1.24
FCF1-204ENST00000553673 FLAD1Q8NFF5 587 aa7.31□□□□□ -1.24
FCF1-204ENST00000553673 NIF3L1Q9GZT8 377 aa7.31□□□□□ -1.24
FCF1-204ENST00000553673 DNAJC25Q9H1X3 360 aa7.31□□□□□ -1.24
FCF1-204ENST00000553673 ANKRD33BA6NCL7 494 aa7.3□□□□□ -1.24
FCF1-204ENST00000553673 DNAJC14Q6Y2X3 702 aaPredicted RBP7.3□□□□□ -1.24
FCF1-204ENST00000553673 KCNB2Q92953 911 aa7.3□□□□□ -1.24
FCF1-204ENST00000553673 ISL2Q96A47 359 aa7.3□□□□□ -1.24
FCF1-204ENST00000553673 TNKS2Q9H2K2 1166 aa7.3□□□□□ -1.24
FCF1-204ENST00000553673 SSU72Q9NP77 194 aaKnown RBP7.3□□□□□ -1.24
FCF1-204ENST00000553673 PODXL2Q9NZ53 605 aa7.3□□□□□ -1.24
FCF1-204ENST00000553673 GPN3Q9UHW5 284 aaPredicted RBP7.3□□□□□ -1.24
FCF1-204ENST00000553673 TRAK1Q9UPV9 953 aa7.3□□□□□ -1.24
FCF1-204ENST00000553673 EIF1AYO14602 144 aaKnown RBP7.29□□□□□ -1.24
FCF1-204ENST00000553673 FGD1P98174 961 aa7.29□□□□□ -1.24
FCF1-204ENST00000553673 GRM2Q14416 872 aa7.29□□□□□ -1.24
FCF1-204ENST00000553673 DSC3Q14574 896 aa7.29□□□□□ -1.24
FCF1-204ENST00000553673 KCNMB1Q16558 191 aa7.29□□□□□ -1.24
FCF1-204ENST00000553673 MLANAQ16655 118 aa7.29□□□□□ -1.24
FCF1-204ENST00000553673 PDZD3Q86UT5 571 aa7.29□□□□□ -1.24
FCF1-204ENST00000553673 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.29□□□□□ -1.24
FCF1-204ENST00000553673 HEXIM2Q96MH2 286 aaKnown RBP7.29□□□□□ -1.24
FCF1-204ENST00000553673 ZNF503-AS2A6NEH8 195 aa7.28□□□□□ -1.24
FCF1-204ENST00000553673 KRTAP19-4Q3LI73 84 aa7.28□□□□□ -1.24
FCF1-204ENST00000553673 DTHD1Q6ZMT9 781 aa7.28□□□□□ -1.24
FCF1-204ENST00000553673 BHLHE22Q8NFJ8 381 aaPredicted RBP7.28□□□□□ -1.24
FCF1-204ENST00000553673 SNX11Q9Y5W9 270 aa7.28□□□□□ -1.24
FCF1-204ENST00000553673 ATP2B2Q01814 1243 aa7.27□□□□□ -1.25
FCF1-204ENST00000553673 ZP2Q05996 745 aa7.27□□□□□ -1.25
FCF1-204ENST00000553673 PPP2R3AQ06190 1150 aa7.27□□□□□ -1.25
FCF1-204ENST00000553673 FMR1Q06787 632 aaKnown RBP eCLIP7.27□□□□□ -1.25
FCF1-204ENST00000553673 IKZF1Q13422 519 aa7.27□□□□□ -1.25
FCF1-204ENST00000553673 CILP2Q8IUL8 1156 aa7.27□□□□□ -1.25
FCF1-204ENST00000553673 ASB11Q8WXH4 323 aa7.27□□□□□ -1.25
FCF1-204ENST00000553673 CSRNP1Q96S65 589 aa7.27□□□□□ -1.25
FCF1-204ENST00000553673 TMEM39AQ9NV64 488 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms