RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 HAND2P61296 217 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 EXOSC10Q01780 885 aaKnown RBP13.36□□□□□ -0.27
CACNB3-224ENST00000552812 CCDC93Q567U6 631 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 RTKN2Q8IZC4 609 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 FBXL16Q8N461 479 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 NCOA7Q8NI08 942 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 PRKAB2O43741 272 aa13.35□□□□□ -0.27
CACNB3-224ENST00000552812 BAG3O95817 575 aa13.35□□□□□ -0.27
CACNB3-224ENST00000552812 PPP4CP60510 307 aa13.35□□□□□ -0.27
CACNB3-224ENST00000552812 GTF2IP78347 998 aa13.35□□□□□ -0.27
CACNB3-224ENST00000552812 TRDNQ13061 729 aa13.35□□□□□ -0.27
CACNB3-224ENST00000552812 MKRN3Q13064 507 aaKnown RBP13.35□□□□□ -0.27
CACNB3-224ENST00000552812 SOGA3Q5TF21 947 aa13.35□□□□□ -0.27
CACNB3-224ENST00000552812 NOL8Q76FK4 1167 aaKnown RBP13.35□□□□□ -0.27
CACNB3-224ENST00000552812 AGXT2Q9BYV1 514 aa13.35□□□□□ -0.27
CACNB3-224ENST00000552812 CRNKL1Q9BZJ0 848 aaKnown RBP13.35□□□□□ -0.27
CACNB3-224ENST00000552812 AATFQ9NY61 560 aaKnown RBP eCLIP13.35□□□□□ -0.27
CACNB3-224ENST00000552812 MROH7-TTC4A0A0A0MT08 1334 aa13.34□□□□□ -0.27
CACNB3-224ENST00000552812 C21orf2O43822 256 aa13.34□□□□□ -0.27
CACNB3-224ENST00000552812 DYNLL1P63167 89 aaKnown RBP13.34□□□□□ -0.27
CACNB3-224ENST00000552812 KIAA2012Q0VF49 1180 aa13.34□□□□□ -0.27
CACNB3-224ENST00000552812 COL9A3Q14050 684 aaPredicted RBP13.34□□□□□ -0.27
CACNB3-224ENST00000552812 TOB2Q14106 344 aaPredicted RBP13.34□□□□□ -0.27
CACNB3-224ENST00000552812 RALYLQ86SE5 291 aaKnown RBP13.34□□□□□ -0.27
CACNB3-224ENST00000552812 PSMD1Q99460 953 aa13.34□□□□□ -0.27
CACNB3-224ENST00000552812 NOL10Q9BSC4 688 aaKnown RBP13.34□□□□□ -0.27
CACNB3-224ENST00000552812 NBPF3Q9H094 633 aa13.34□□□□□ -0.27
CACNB3-224ENST00000552812 ATP8A2Q9NTI2 1148 aa13.34□□□□□ -0.27
CACNB3-224ENST00000552812 MYH2Q9UKX2 1941 aa13.34□□□□□ -0.27
CACNB3-224ENST00000552812 MCM5P33992 734 aa13.33□□□□□ -0.27
CACNB3-224ENST00000552812 FKBP1AP62942 108 aaKnown RBP13.33□□□□□ -0.27
CACNB3-224ENST00000552812 GRIK5Q16478 980 aa13.33□□□□□ -0.27
CACNB3-224ENST00000552812 DOK7Q18PE1 504 aa13.33□□□□□ -0.27
CACNB3-224ENST00000552812 TBC1D10CQ8IV04 446 aa13.33□□□□□ -0.27
CACNB3-224ENST00000552812 MB21D2Q8IYB1 491 aaPredicted RBP13.33□□□□□ -0.27
CACNB3-224ENST00000552812 SDR42E1Q8WUS8 393 aa13.33□□□□□ -0.27
CACNB3-224ENST00000552812 CNNM2Q9H8M5 875 aa13.33□□□□□ -0.27
CACNB3-224ENST00000552812 PIM2Q9P1W9 311 aa13.33□□□□□ -0.27
CACNB3-224ENST00000552812 ANAPC4Q9UJX5 808 aa13.33□□□□□ -0.27
CACNB3-224ENST00000552812 CD2APQ9Y5K6 639 aa13.33□□□□□ -0.27
CACNB3-224ENST00000552812 GAKO14976 1311 aa13.33□□□□□ -0.28
CACNB3-224ENST00000552812 Q6ZUG5 572 aa13.33□□□□□ -0.28
CACNB3-224ENST00000552812 STAG1Q8WVM7 1258 aa13.33□□□□□ -0.28
CACNB3-224ENST00000552812 TCEANC2Q96MN5 208 aa13.33□□□□□ -0.28
CACNB3-224ENST00000552812 VPS33BQ9H267 617 aa13.33□□□□□ -0.28
CACNB3-224ENST00000552812 RNF41Q9H4P4 317 aaPredicted RBP13.33□□□□□ -0.28
CACNB3-224ENST00000552812 TPCN1Q9ULQ1 816 aa13.33□□□□□ -0.28
CACNB3-224ENST00000552812 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.33□□□□□ -0.28
CACNB3-224ENST00000552812 BRCA1P38398 1863 aaKnown RBP13.32□□□□□ -0.28
CACNB3-224ENST00000552812 GPR75-ASB3A0A0A6YYF3 556 aa13.32□□□□□ -0.28
CACNB3-224ENST00000552812 PCP11498 1178 aaKnown RBP13.32□□□□□ -0.28
CACNB3-224ENST00000552812 FGD1P98174 961 aa13.32□□□□□ -0.28
CACNB3-224ENST00000552812 PPARAQ07869 468 aa13.32□□□□□ -0.28
CACNB3-224ENST00000552812 DIXDC1Q155Q3 683 aa13.32□□□□□ -0.28
CACNB3-224ENST00000552812 ME3Q16798 604 aa13.32□□□□□ -0.28
CACNB3-224ENST00000552812 AKNAD1Q5T1N1 836 aa13.32□□□□□ -0.28
CACNB3-224ENST00000552812 STRIP1Q5VSL9 837 aa13.32□□□□□ -0.28
CACNB3-224ENST00000552812 KRT23Q9C075 422 aa13.32□□□□□ -0.28
CACNB3-224ENST00000552812 DBNDD1Q9H9R9 158 aa13.32□□□□□ -0.28
CACNB3-224ENST00000552812 DCP1AQ9NPI6 582 aaPredicted RBP13.32□□□□□ -0.28
CACNB3-224ENST00000552812 ECE2O60344 883 aa13.31□□□□□ -0.28
CACNB3-224ENST00000552812 NUCB2P80303 420 aa13.31□□□□□ -0.28
CACNB3-224ENST00000552812 MFSD6Q6ZSS7 791 aa13.31□□□□□ -0.28
CACNB3-224ENST00000552812 ARPP21Q9UBL0 812 aaPredicted RBP13.31□□□□□ -0.28
CACNB3-224ENST00000552812 LAMB1P07942 1786 aa13.31□□□□□ -0.28
CACNB3-224ENST00000552812 LARGE1O95461 756 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 EVCP57679 992 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 AOC3Q16853 763 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 SBK1Q52WX2 424 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 CERS5Q8N5B7 392 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 BRF1Q92994 677 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 LARP6Q9BRS8 491 aaKnown RBP13.3□□□□□ -0.28
CACNB3-224ENST00000552812 ZNF646O15015 1829 aaPredicted RBP13.3□□□□□ -0.28
CACNB3-224ENST00000552812 BAZ2AQ9UIF9 1905 aaKnown RBP13.3□□□□□ -0.28
CACNB3-224ENST00000552812 NEDD4P46934 1319 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 PPIP5K2O43314 1243 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 PRC1O43663 620 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 PTGER2P43116 358 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 BTDP43251 543 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 CTDSPL2Q05D32 466 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 RAB3GAP1Q15042 981 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 DALRD3Q5D0E6 543 aaKnown RBP13.3□□□□□ -0.28
CACNB3-224ENST00000552812 CTR9Q6PD62 1173 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 FBXW7Q969H0 707 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 TMEM87BQ96K49 555 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 MTA3Q9BTC8 594 aa13.3□□□□□ -0.28
CACNB3-224ENST00000552812 MKRN1Q9UHC7 482 aaKnown RBP13.3□□□□□ -0.28
CACNB3-224ENST00000552812 SCN9AQ15858 1988 aa13.29□□□□□ -0.28
CACNB3-224ENST00000552812 PSDA5PKW4 1024 aaPredicted RBP13.29□□□□□ -0.28
CACNB3-224ENST00000552812 USP17L3A6NCW0 530 aa13.29□□□□□ -0.28
CACNB3-224ENST00000552812 USP17L4A6NCW7 530 aa13.29□□□□□ -0.28
CACNB3-224ENST00000552812 FGRP09769 529 aa13.29□□□□□ -0.28
CACNB3-224ENST00000552812 NT5C2P49902 561 aa13.29□□□□□ -0.28
CACNB3-224ENST00000552812 ANTXR2P58335 489 aa13.29□□□□□ -0.28
CACNB3-224ENST00000552812 DACT2Q5SW24 774 aa13.29□□□□□ -0.28
CACNB3-224ENST00000552812 USP17L1Q7RTZ2 530 aa13.29□□□□□ -0.28
CACNB3-224ENST00000552812 CHMP4CQ96CF2 233 aa13.29□□□□□ -0.28
CACNB3-224ENST00000552812 ZNF274Q96GC6 653 aaPredicted RBP13.29□□□□□ -0.28
CACNB3-224ENST00000552812 MRIQ9BWK5 157 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms