RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 EIF6P56537 245 aaKnown RBP12.92□□□□□ -0.34
LINC00661-206ENST00000552608 CTDSPL2Q05D32 466 aa12.92□□□□□ -0.34
LINC00661-206ENST00000552608 PDE4BQ07343 736 aa12.92□□□□□ -0.34
LINC00661-206ENST00000552608 DDX60LQ5H9U9 1706 aaKnown RBP12.92□□□□□ -0.34
LINC00661-206ENST00000552608 CIAPIN1Q6FI81 312 aa12.92□□□□□ -0.34
LINC00661-206ENST00000552608 Q6ZUG5 572 aa12.92□□□□□ -0.34
LINC00661-206ENST00000552608 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
LINC00661-206ENST00000552608 OGFOD1Q8N543 542 aa12.92□□□□□ -0.34
LINC00661-206ENST00000552608 AGBL3Q8NEM8 1001 aa12.92□□□□□ -0.34
LINC00661-206ENST00000552608 TGFBRAP1Q8WUH2 860 aa12.92□□□□□ -0.34
LINC00661-206ENST00000552608 INTS4Q96HW7 963 aaKnown RBP12.92□□□□□ -0.34
LINC00661-206ENST00000552608 MTA3Q9BTC8 594 aa12.92□□□□□ -0.34
LINC00661-206ENST00000552608 MXD3Q9BW11 206 aa12.92□□□□□ -0.34
LINC00661-206ENST00000552608 ZNF287Q9HBT7 754 aa12.92□□□□□ -0.34
LINC00661-206ENST00000552608 KCNQ5Q9NR82 932 aa12.92□□□□□ -0.34
LINC00661-206ENST00000552608 MCM9Q9NXL9 1143 aa12.92□□□□□ -0.34
LINC00661-206ENST00000552608 TAF6LQ9Y6J9 622 aa12.92□□□□□ -0.34
LINC00661-206ENST00000552608 ERICH2A1L162 156 aa12.91□□□□□ -0.34
LINC00661-206ENST00000552608 USP17L12C9JPN9 530 aa12.91□□□□□ -0.34
LINC00661-206ENST00000552608 USP17L21D6R901 530 aa12.91□□□□□ -0.34
LINC00661-206ENST00000552608 PRC1O43663 620 aa12.91□□□□□ -0.34
LINC00661-206ENST00000552608 POLR3DP05423 398 aaPredicted RBP12.91□□□□□ -0.34
LINC00661-206ENST00000552608 SCNN1DP51172 638 aa12.91□□□□□ -0.34
LINC00661-206ENST00000552608 SART3Q15020 963 aaKnown RBP12.91□□□□□ -0.34
LINC00661-206ENST00000552608 CTR9Q6PD62 1173 aa12.91□□□□□ -0.34
LINC00661-206ENST00000552608 TBC1D10CQ8IV04 446 aa12.91□□□□□ -0.34
LINC00661-206ENST00000552608 FBXL16Q8N461 479 aa12.91□□□□□ -0.34
LINC00661-206ENST00000552608 SPRYD3Q8NCJ5 442 aa12.91□□□□□ -0.34
LINC00661-206ENST00000552608 ESR2Q92731 530 aa12.91□□□□□ -0.34
LINC00661-206ENST00000552608 TMEM87BQ96K49 555 aa12.91□□□□□ -0.34
LINC00661-206ENST00000552608 ZDHHC15Q96MV8 337 aa12.91□□□□□ -0.34
LINC00661-206ENST00000552608 CWC22Q9HCG8 908 aaKnown RBP12.91□□□□□ -0.34
LINC00661-206ENST00000552608 USP40Q9NVE5 1235 aa12.91□□□□□ -0.34
LINC00661-206ENST00000552608 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.91□□□□□ -0.34
LINC00661-206ENST00000552608 PSMD14O00487 310 aa12.9□□□□□ -0.34
LINC00661-206ENST00000552608 RAD17O75943 681 aa12.9□□□□□ -0.34
LINC00661-206ENST00000552608 RPS12P25398 132 aaKnown RBP12.9□□□□□ -0.34
LINC00661-206ENST00000552608 RHBDL3P58872 404 aa12.9□□□□□ -0.34
LINC00661-206ENST00000552608 EXOSC10Q01780 885 aaKnown RBP12.9□□□□□ -0.34
LINC00661-206ENST00000552608 CUL4AQ13619 759 aa12.9□□□□□ -0.34
LINC00661-206ENST00000552608 RRP12Q5JTH9 1297 aaKnown RBP12.9□□□□□ -0.34
LINC00661-206ENST00000552608 MAPKAPK5Q8IW41 473 aa12.9□□□□□ -0.34
LINC00661-206ENST00000552608 SYT17Q9BSW7 474 aa12.9□□□□□ -0.34
LINC00661-206ENST00000552608 AGXT2Q9BYV1 514 aa12.9□□□□□ -0.34
LINC00661-206ENST00000552608 SLKQ9H2G2 1235 aaPredicted RBP12.9□□□□□ -0.34
LINC00661-206ENST00000552608 TMOD2Q9NZR1 351 aa12.9□□□□□ -0.34
LINC00661-206ENST00000552608 CIZ1Q9ULV3 898 aaPredicted RBP12.9□□□□□ -0.34
LINC00661-206ENST00000552608 ROBO3Q96MS0 1386 aa12.9□□□□□ -0.34
LINC00661-206ENST00000552608 COL4A5P29400 1685 aa12.89□□□□□ -0.35
LINC00661-206ENST00000552608 FLT1P17948 1338 aa12.89□□□□□ -0.35
LINC00661-206ENST00000552608 NEDD4P46934 1319 aa12.89□□□□□ -0.35
LINC00661-206ENST00000552608 B4E1Z4 1266 aa12.89□□□□□ -0.35
LINC00661-206ENST00000552608 TOB2Q14106 344 aaPredicted RBP12.89□□□□□ -0.35
LINC00661-206ENST00000552608 C12orf60Q5U649 245 aa12.89□□□□□ -0.35
LINC00661-206ENST00000552608 ARHGAP27Q6ZUM4 889 aa12.89□□□□□ -0.35
LINC00661-206ENST00000552608 TTC6Q86TZ1 520 aa12.89□□□□□ -0.35
LINC00661-206ENST00000552608 BRF1Q92994 677 aa12.89□□□□□ -0.35
LINC00661-206ENST00000552608 TCEANC2Q96MN5 208 aa12.89□□□□□ -0.35
LINC00661-206ENST00000552608 NBPF3Q9H094 633 aa12.89□□□□□ -0.35
LINC00661-206ENST00000552608 CHMP5Q9NZZ3 219 aa12.89□□□□□ -0.35
LINC00661-206ENST00000552608 SBF1O95248 1867 aa12.89□□□□□ -0.35
LINC00661-206ENST00000552608 ORC4O43929 436 aa12.88□□□□□ -0.35
LINC00661-206ENST00000552608 KDM4AO75164 1064 aa12.88□□□□□ -0.35
LINC00661-206ENST00000552608 HLA-DOAP06340 250 aa12.88□□□□□ -0.35
LINC00661-206ENST00000552608 USP17L8P0C7I0 530 aa12.88□□□□□ -0.35
LINC00661-206ENST00000552608 RASSF7Q02833 373 aa12.88□□□□□ -0.35
LINC00661-206ENST00000552608 DLGAP5Q15398 846 aa12.88□□□□□ -0.35
LINC00661-206ENST00000552608 CFAP100Q494V2 611 aa12.88□□□□□ -0.35
LINC00661-206ENST00000552608 CCDC178Q5BJE1 867 aa12.88□□□□□ -0.35
LINC00661-206ENST00000552608 IQCA1Q86XH1 822 aa12.88□□□□□ -0.35
LINC00661-206ENST00000552608 TMTC2Q8N394 836 aa12.88□□□□□ -0.35
LINC00661-206ENST00000552608 ZNF274Q96GC6 653 aaPredicted RBP12.88□□□□□ -0.35
LINC00661-206ENST00000552608 MKRN1Q9UHC7 482 aaKnown RBP12.88□□□□□ -0.35
LINC00661-206ENST00000552608 TAOK2Q9UL54 1235 aa12.88□□□□□ -0.35
LINC00661-206ENST00000552608 MYO1BO43795 1136 aa12.87□□□□□ -0.35
LINC00661-206ENST00000552608 NPM3O75607 178 aaKnown RBP12.87□□□□□ -0.35
LINC00661-206ENST00000552608 FGRP09769 529 aa12.87□□□□□ -0.35
LINC00661-206ENST00000552608 LMNB1P20700 586 aa12.87□□□□□ -0.35
LINC00661-206ENST00000552608 CXCL9Q07325 125 aa12.87□□□□□ -0.35
LINC00661-206ENST00000552608 PICALMQ13492 652 aa12.87□□□□□ -0.35
LINC00661-206ENST00000552608 APOBEC3HQ6NTF7 200 aaKnown RBP12.87□□□□□ -0.35
LINC00661-206ENST00000552608 CDC42EP5Q6NZY7 148 aa12.87□□□□□ -0.35
LINC00661-206ENST00000552608 SYNE3Q6ZMZ3 975 aa12.87□□□□□ -0.35
LINC00661-206ENST00000552608 CHST3Q7LGC8 479 aa12.87□□□□□ -0.35
LINC00661-206ENST00000552608 UBAC1Q9BSL1 405 aa12.87□□□□□ -0.35
LINC00661-206ENST00000552608 DHX36Q9H2U1 1008 aaKnown RBP12.87□□□□□ -0.35
LINC00661-206ENST00000552608 MKNK2Q9HBH9 465 aa12.87□□□□□ -0.35
LINC00661-206ENST00000552608 FOXD4L1Q9NU39 408 aa12.87□□□□□ -0.35
LINC00661-206ENST00000552608 TPCN1Q9ULQ1 816 aa12.87□□□□□ -0.35
LINC00661-206ENST00000552608 ANGEL1Q9UNK9 670 aaKnown RBP12.87□□□□□ -0.35
LINC00661-206ENST00000552608 CYP2D7A0A087X1C5 515 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 CCDC69A6NI79 296 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 SH2B2O14492 632 aaPredicted RBP12.86□□□□□ -0.35
LINC00661-206ENST00000552608 IFIT3O14879 490 aaKnown RBP12.86□□□□□ -0.35
LINC00661-206ENST00000552608 DHX16O60231 1041 aaKnown RBP12.86□□□□□ -0.35
LINC00661-206ENST00000552608 RANBP6O60518 1105 aaKnown RBP12.86□□□□□ -0.35
LINC00661-206ENST00000552608 PDIA4P13667 645 aaKnown RBP12.86□□□□□ -0.35
LINC00661-206ENST00000552608 LIFRP42702 1097 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 ANTXR2P58335 489 aa12.86□□□□□ -0.35
LINC00661-206ENST00000552608 NUCB2P80303 420 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms