RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 NFIAQ12857 509 aa11.06□□□□□ -0.64
CCDC59-207ENST00000552606 SLFNL1Q499Z3 407 aa11.06□□□□□ -0.64
CCDC59-207ENST00000552606 SLC9C2Q5TAH2 1124 aa11.06□□□□□ -0.64
CCDC59-207ENST00000552606 USP48Q86UV5 1035 aa11.06□□□□□ -0.64
CCDC59-207ENST00000552606 SKAP1Q86WV1 359 aa11.06□□□□□ -0.64
CCDC59-207ENST00000552606 CDAN1Q8IWY9 1227 aa11.06□□□□□ -0.64
CCDC59-207ENST00000552606 CDCA5Q96FF9 252 aa11.06□□□□□ -0.64
CCDC59-207ENST00000552606 TEPSINQ96N21 525 aa11.06□□□□□ -0.64
CCDC59-207ENST00000552606 RIOK1Q9BRS2 568 aaKnown RBP11.06□□□□□ -0.64
CCDC59-207ENST00000552606 IDI2Q9BXS1 227 aa11.06□□□□□ -0.64
CCDC59-207ENST00000552606 VEZTQ9HBM0 779 aa11.06□□□□□ -0.64
CCDC59-207ENST00000552606 DDX4Q9NQI0 724 aaKnown RBP11.06□□□□□ -0.64
CCDC59-207ENST00000552606 FAM198AQ9UFP1 575 aa11.06□□□□□ -0.64
CCDC59-207ENST00000552606 PPP2R3BQ9Y5P8 575 aa11.06□□□□□ -0.64
CCDC59-207ENST00000552606 TNFAIP1Q13829 316 aa11.05□□□□□ -0.64
CCDC59-207ENST00000552606 UBE3CQ15386 1083 aa11.05□□□□□ -0.64
CCDC59-207ENST00000552606 TTC22Q5TAA0 569 aa11.05□□□□□ -0.64
CCDC59-207ENST00000552606 FAM83AQ86UY5 434 aa11.05□□□□□ -0.64
CCDC59-207ENST00000552606 SH3RF3Q8TEJ3 882 aaPredicted RBP11.05□□□□□ -0.64
CCDC59-207ENST00000552606 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.05□□□□□ -0.64
CCDC59-207ENST00000552606 DEFB129Q9H1M3 183 aa11.05□□□□□ -0.64
CCDC59-207ENST00000552606 AATFQ9NY61 560 aaKnown RBP eCLIP11.05□□□□□ -0.64
CCDC59-207ENST00000552606 TMOD2Q9NZR1 351 aa11.05□□□□□ -0.64
CCDC59-207ENST00000552606 PCDH10Q9P2E7 1040 aa11.05□□□□□ -0.64
CCDC59-207ENST00000552606 TCP10L2B9ZVM9 353 aa11.04□□□□□ -0.64
CCDC59-207ENST00000552606 APLP1P51693 650 aa11.04□□□□□ -0.64
CCDC59-207ENST00000552606 DYNLL1P63167 89 aaKnown RBP11.04□□□□□ -0.64
CCDC59-207ENST00000552606 RASA3Q14644 834 aa11.04□□□□□ -0.64
CCDC59-207ENST00000552606 CST9Q5W186 159 aa11.04□□□□□ -0.64
CCDC59-207ENST00000552606 MIGA1Q8NAN2 632 aa11.04□□□□□ -0.64
CCDC59-207ENST00000552606 EVI5LQ96CN4 794 aa11.04□□□□□ -0.64
CCDC59-207ENST00000552606 FSD1Q9BTV5 496 aa11.04□□□□□ -0.64
CCDC59-207ENST00000552606 TMEM39BQ9GZU3 492 aa11.04□□□□□ -0.64
CCDC59-207ENST00000552606 USP40Q9NVE5 1235 aa11.04□□□□□ -0.64
CCDC59-207ENST00000552606 FLT1P17948 1338 aa11.04□□□□□ -0.64
CCDC59-207ENST00000552606 ENTPD3O75355 529 aa11.03□□□□□ -0.64
CCDC59-207ENST00000552606 ZFYP08048 801 aaPredicted RBP11.03□□□□□ -0.64
CCDC59-207ENST00000552606 PLCG2P16885 1265 aa11.03□□□□□ -0.64
CCDC59-207ENST00000552606 HSPA6P17066 643 aa11.03□□□□□ -0.64
CCDC59-207ENST00000552606 RGS3P49796 1198 aa11.03□□□□□ -0.64
CCDC59-207ENST00000552606 PRAMEF18Q5VWM3 479 aa11.03□□□□□ -0.64
CCDC59-207ENST00000552606 ZSCAN25Q6NSZ9 544 aa11.03□□□□□ -0.64
CCDC59-207ENST00000552606 SH3BP5LQ7L8J4 393 aa11.03□□□□□ -0.64
CCDC59-207ENST00000552606 CERS3Q8IU89 383 aa11.03□□□□□ -0.64
CCDC59-207ENST00000552606 LCORLQ8N3X6 602 aa11.03□□□□□ -0.64
CCDC59-207ENST00000552606 FAM151AQ8WW52 585 aa11.03□□□□□ -0.64
CCDC59-207ENST00000552606 APPBP2Q92624 585 aa11.03□□□□□ -0.64
CCDC59-207ENST00000552606 MAGEB6P1A0A0J9YX57 407 aa11.02□□□□□ -0.65
CCDC59-207ENST00000552606 RNF113AO15541 343 aaKnown RBP11.02□□□□□ -0.65
CCDC59-207ENST00000552606 CELF2O95319 508 aaKnown RBP11.02□□□□□ -0.65
CCDC59-207ENST00000552606 BAG3O95817 575 aa11.02□□□□□ -0.65
CCDC59-207ENST00000552606 TNNI2P48788 182 aa11.02□□□□□ -0.65
CCDC59-207ENST00000552606 ZMYM1Q5SVZ6 1142 aa11.02□□□□□ -0.65
CCDC59-207ENST00000552606 NBPF12Q5TAG4 269 aaPredicted RBP11.02□□□□□ -0.65
CCDC59-207ENST00000552606 TICAM2Q86XR7 235 aa11.02□□□□□ -0.65
CCDC59-207ENST00000552606 ZFPM1Q8IX07 1006 aa11.02□□□□□ -0.65
CCDC59-207ENST00000552606 TEX11Q8IYF3 940 aa11.02□□□□□ -0.65
CCDC59-207ENST00000552606 OSBP2Q969R2 916 aa11.02□□□□□ -0.65
CCDC59-207ENST00000552606 NOL10Q9BSC4 688 aaKnown RBP11.02□□□□□ -0.65
CCDC59-207ENST00000552606 PUS7LQ9H0K6 701 aaKnown RBP11.02□□□□□ -0.65
CCDC59-207ENST00000552606 OSBPL5Q9H0X9 879 aaPredicted RBP11.02□□□□□ -0.65
CCDC59-207ENST00000552606 MKRN1Q9UHC7 482 aaKnown RBP11.02□□□□□ -0.65
CCDC59-207ENST00000552606 LOC285556D6RIA3 1793 aa11.02□□□□□ -0.65
CCDC59-207ENST00000552606 TMEM88BA6NKF7 163 aa11.01□□□□□ -0.65
CCDC59-207ENST00000552606 M0R2C6 588 aa11.01□□□□□ -0.65
CCDC59-207ENST00000552606 MBD4O95243 580 aa11.01□□□□□ -0.65
CCDC59-207ENST00000552606 TCP10Q12799 353 aa11.01□□□□□ -0.65
CCDC59-207ENST00000552606 ZNF408Q9H9D4 720 aa11.01□□□□□ -0.65
CCDC59-207ENST00000552606 MYH4Q9Y623 1939 aa11□□□□□ -0.65
CCDC59-207ENST00000552606 A0A0D9SFI3 127 aa11□□□□□ -0.65
CCDC59-207ENST00000552606 DDTLA6NHG4 134 aaPredicted RBP11□□□□□ -0.65
CCDC59-207ENST00000552606 TRIM6-TRIM34B2RNG4 842 aa11□□□□□ -0.65
CCDC59-207ENST00000552606 SDSP20132 328 aa11□□□□□ -0.65
CCDC59-207ENST00000552606 PICALMQ13492 652 aa11□□□□□ -0.65
CCDC59-207ENST00000552606 MAP3K11Q16584 847 aa11□□□□□ -0.65
CCDC59-207ENST00000552606 TGFBRAP1Q8WUH2 860 aa11□□□□□ -0.65
CCDC59-207ENST00000552606 SEC62Q99442 399 aaKnown RBP11□□□□□ -0.65
CCDC59-207ENST00000552606 ARMT1Q9H993 441 aa11□□□□□ -0.65
CCDC59-207ENST00000552606 GBA2Q9HCG7 927 aaPredicted RBP11□□□□□ -0.65
CCDC59-207ENST00000552606 METRNQ9UJH8 293 aa11□□□□□ -0.65
CCDC59-207ENST00000552606 TLL2Q9Y6L7 1015 aa11□□□□□ -0.65
CCDC59-207ENST00000552606 FOXP2O15409 715 aa10.99□□□□□ -0.65
CCDC59-207ENST00000552606 GPAA1O43292 621 aa10.99□□□□□ -0.65
CCDC59-207ENST00000552606 FKBP1BP68106 108 aa10.99□□□□□ -0.65
CCDC59-207ENST00000552606 HTRA3P83110 453 aa10.99□□□□□ -0.65
CCDC59-207ENST00000552606 LRRFIP1Q32MZ4 808 aaKnown RBP10.99□□□□□ -0.65
CCDC59-207ENST00000552606 MOB2Q70IA6 237 aa10.99□□□□□ -0.65
CCDC59-207ENST00000552606 SAPCD2Q86UD0 394 aa10.99□□□□□ -0.65
CCDC59-207ENST00000552606 MAPKAPK5Q8IW41 473 aa10.99□□□□□ -0.65
CCDC59-207ENST00000552606 SDR42E1Q8WUS8 393 aa10.99□□□□□ -0.65
CCDC59-207ENST00000552606 RILPL2Q969X0 211 aa10.99□□□□□ -0.65
CCDC59-207ENST00000552606 AIDAQ96BJ3 306 aa10.99□□□□□ -0.65
CCDC59-207ENST00000552606 FAM227BQ96M60 508 aa10.99□□□□□ -0.65
CCDC59-207ENST00000552606 STRBPQ96SI9 672 aaKnown RBP10.99□□□□□ -0.65
CCDC59-207ENST00000552606 CRNKL1Q9BZJ0 848 aaKnown RBP10.99□□□□□ -0.65
CCDC59-207ENST00000552606 EPB41L4AQ9HCS5 686 aaPredicted RBP10.99□□□□□ -0.65
CCDC59-207ENST00000552606 DCP1AQ9NPI6 582 aaPredicted RBP10.99□□□□□ -0.65
CCDC59-207ENST00000552606 FZD1Q9UP38 647 aa10.99□□□□□ -0.65
CCDC59-207ENST00000552606 PARP14Q460N5 1801 aa10.99□□□□□ -0.65
CCDC59-207ENST00000552606 RASSF10A6NK89 507 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms