RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 CBX8Q9HC52 389 aa9.22□□□□□ -0.93
LETMD1-233ENST00000552433 KRT82Q9NSB4 513 aa9.22□□□□□ -0.93
LETMD1-233ENST00000552433 BSDC1Q9NW68 430 aaPredicted RBP9.22□□□□□ -0.93
LETMD1-233ENST00000552433 ADGRE2Q9UHX3 823 aa9.22□□□□□ -0.93
LETMD1-233ENST00000552433 C3orf58Q8NDZ4 430 aa9.21□□□□□ -0.94
LETMD1-233ENST00000552433 PAX4O43316 350 aa9.2□□□□□ -0.94
LETMD1-233ENST00000552433 FBXO24O75426 580 aa9.2□□□□□ -0.94
LETMD1-233ENST00000552433 PRNPP04156 253 aa9.2□□□□□ -0.94
LETMD1-233ENST00000552433 FAM87AP0C7U9 286 aa9.2□□□□□ -0.94
LETMD1-233ENST00000552433 ZSCAN29Q8IWY8 852 aaPredicted RBP9.2□□□□□ -0.94
LETMD1-233ENST00000552433 GRIN3AQ8TCU5 1115 aa9.2□□□□□ -0.94
LETMD1-233ENST00000552433 NME2P22392 152 aa9.19□□□□□ -0.94
LETMD1-233ENST00000552433 VSIG10LQ86VR7 867 aa9.19□□□□□ -0.94
LETMD1-233ENST00000552433 GPBAR1Q8TDU6 330 aa9.19□□□□□ -0.94
LETMD1-233ENST00000552433 NECAB3Q96P71 396 aaPredicted RBP9.19□□□□□ -0.94
LETMD1-233ENST00000552433 CSADQ9Y600 493 aa9.19□□□□□ -0.94
LETMD1-233ENST00000552433 PAGE1O75459 146 aa9.18□□□□□ -0.94
LETMD1-233ENST00000552433 FMR1Q06787 632 aaKnown RBP eCLIP9.18□□□□□ -0.94
LETMD1-233ENST00000552433 FLCNQ8NFG4 579 aa9.18□□□□□ -0.94
LETMD1-233ENST00000552433 KRTAP4-12Q9BQ66 201 aa9.18□□□□□ -0.94
LETMD1-233ENST00000552433 SSU72Q9NP77 194 aaKnown RBP9.18□□□□□ -0.94
LETMD1-233ENST00000552433 LEFTY1O75610 366 aa9.17□□□□□ -0.94
LETMD1-233ENST00000552433 NEFMP07197 916 aa9.17□□□□□ -0.94
LETMD1-233ENST00000552433 BMP6P22004 513 aa9.17□□□□□ -0.94
LETMD1-233ENST00000552433 COL19A1Q14993 1142 aa9.17□□□□□ -0.94
LETMD1-233ENST00000552433 CYP27C1Q4G0S4 372 aa9.17□□□□□ -0.94
LETMD1-233ENST00000552433 ZC3H12AQ5D1E8 599 aaKnown RBP9.17□□□□□ -0.94
LETMD1-233ENST00000552433 FAM181AQ8N9Y4 354 aa9.17□□□□□ -0.94
LETMD1-233ENST00000552433 ACSBG1Q96GR2 724 aa9.17□□□□□ -0.94
LETMD1-233ENST00000552433 FBXL18Q96ME1 805 aa9.17□□□□□ -0.94
LETMD1-233ENST00000552433 ASB16Q96NS5 453 aa9.17□□□□□ -0.94
LETMD1-233ENST00000552433 EMILIN2Q9BXX0 1053 aa9.17□□□□□ -0.94
LETMD1-233ENST00000552433 PCOLCE2Q9UKZ9 415 aa9.17□□□□□ -0.94
LETMD1-233ENST00000552433 ENC1O14682 589 aa9.16□□□□□ -0.94
LETMD1-233ENST00000552433 GSTT1P30711 240 aa9.16□□□□□ -0.94
LETMD1-233ENST00000552433 KCNA1Q09470 495 aa9.16□□□□□ -0.94
LETMD1-233ENST00000552433 ZNF252P-AS1Q0IIN9 211 aa9.16□□□□□ -0.94
LETMD1-233ENST00000552433 BNIP3Q12983 259 aa9.16□□□□□ -0.94
LETMD1-233ENST00000552433 ISL2Q96A47 359 aa9.16□□□□□ -0.94
LETMD1-233ENST00000552433 BCCIPQ9P287 314 aaKnown RBP eCLIP9.16□□□□□ -0.94
LETMD1-233ENST00000552433 HNRNPUQ00839 825 aaKnown RBP eCLIP9.15□□□□□ -0.94
LETMD1-233ENST00000552433 ALG1LQ6GMV1 187 aa9.15□□□□□ -0.94
LETMD1-233ENST00000552433 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.15□□□□□ -0.94
LETMD1-233ENST00000552433 FAM9AQ8IZU1 332 aaPredicted RBP9.15□□□□□ -0.94
LETMD1-233ENST00000552433 FBF1Q8TES7 1133 aa9.15□□□□□ -0.94
LETMD1-233ENST00000552433 PAK6Q9NQU5 681 aaPredicted RBP9.15□□□□□ -0.94
LETMD1-233ENST00000552433 RNF114Q9Y508 228 aa9.15□□□□□ -0.94
LETMD1-233ENST00000552433 U3KQE9 123 aa9.15□□□□□ -0.94
LETMD1-233ENST00000552433 DCDC2CA8MYV0 355 aa9.14□□□□□ -0.95
LETMD1-233ENST00000552433 PPM1JQ5JR12 505 aa9.14□□□□□ -0.95
LETMD1-233ENST00000552433 RASIP1Q5U651 963 aa9.14□□□□□ -0.95
LETMD1-233ENST00000552433 ZNF574Q6ZN55 896 aaPredicted RBP9.14□□□□□ -0.95
LETMD1-233ENST00000552433 C12orf40Q86WS4 652 aa9.14□□□□□ -0.95
LETMD1-233ENST00000552433 PLD6Q8N2A8 252 aaKnown RBP9.14□□□□□ -0.95
LETMD1-233ENST00000552433 ERVK-24P63145 666 aa9.13□□□□□ -0.95
LETMD1-233ENST00000552433 SPRED2Q7Z698 418 aa9.13□□□□□ -0.95
LETMD1-233ENST00000552433 RNF214Q8ND24 703 aa9.13□□□□□ -0.95
LETMD1-233ENST00000552433 BCL7CQ8WUZ0 217 aaPredicted RBP9.13□□□□□ -0.95
LETMD1-233ENST00000552433 CEP44Q9C0F1 390 aa9.13□□□□□ -0.95
LETMD1-233ENST00000552433 P4HBP07237 508 aaKnown RBP9.12□□□□□ -0.95
LETMD1-233ENST00000552433 ATP2B2Q01814 1243 aa9.12□□□□□ -0.95
LETMD1-233ENST00000552433 DHX37Q8IY37 1157 aaKnown RBP9.12□□□□□ -0.95
LETMD1-233ENST00000552433 FMNL2Q96PY5 1086 aa9.12□□□□□ -0.95
LETMD1-233ENST00000552433 DUSP23Q9BVJ7 150 aa9.12□□□□□ -0.95
LETMD1-233ENST00000552433 SRCIN1Q9C0H9 1055 aa9.12□□□□□ -0.95
LETMD1-233ENST00000552433 SLC5A6Q9Y289 635 aa9.12□□□□□ -0.95
LETMD1-233ENST00000552433 UBE3DQ7Z6J8 389 aa9.11□□□□□ -0.95
LETMD1-233ENST00000552433 KRTAP1-3Q8IUG1 177 aa9.11□□□□□ -0.95
LETMD1-233ENST00000552433 TOP6BLQ8N6T0 577 aa9.11□□□□□ -0.95
LETMD1-233ENST00000552433 PICK1Q9NRD5 415 aa9.11□□□□□ -0.95
LETMD1-233ENST00000552433 CACNA2D2Q9NY47 1150 aa9.11□□□□□ -0.95
LETMD1-233ENST00000552433 SPG7Q9UQ90 795 aa9.11□□□□□ -0.95
LETMD1-233ENST00000552433 SAMM50Q9Y512 469 aa9.11□□□□□ -0.95
LETMD1-233ENST00000552433 GIPC1O14908 333 aa9.1□□□□□ -0.95
LETMD1-233ENST00000552433 LDHBP07195 334 aaKnown RBP9.1□□□□□ -0.95
LETMD1-233ENST00000552433 CELA3AP09093 270 aa9.1□□□□□ -0.95
LETMD1-233ENST00000552433 USP17L7P0C7H9 530 aa9.1□□□□□ -0.95
LETMD1-233ENST00000552433 TXKP42681 527 aa9.1□□□□□ -0.95
LETMD1-233ENST00000552433 LLGL2Q6P1M3 1020 aa9.1□□□□□ -0.95
LETMD1-233ENST00000552433 CBLL1Q75N03 491 aa9.1□□□□□ -0.95
LETMD1-233ENST00000552433 KRTAP19-1Q8IUB9 90 aa9.1□□□□□ -0.95
LETMD1-233ENST00000552433 NETO1Q8TDF5 533 aa9.1□□□□□ -0.95
LETMD1-233ENST00000552433 C12orf49Q9H741 205 aa9.1□□□□□ -0.95
LETMD1-233ENST00000552433 GOLGA2P5Q9HBQ8 144 aa9.1□□□□□ -0.95
LETMD1-233ENST00000552433 PCDHA4Q9UN74 947 aa9.1□□□□□ -0.95
LETMD1-233ENST00000552433 CD96P40200 585 aa9.09□□□□□ -0.95
LETMD1-233ENST00000552433 ARHGAP27Q6ZUM4 889 aa9.09□□□□□ -0.95
LETMD1-233ENST00000552433 WFDC3Q8IUB2 231 aa9.09□□□□□ -0.95
LETMD1-233ENST00000552433 AGBL5Q8NDL9 886 aa9.09□□□□□ -0.95
LETMD1-233ENST00000552433 TRAIPQ9BWF2 469 aa9.09□□□□□ -0.95
LETMD1-233ENST00000552433 RNF19AQ9NV58 838 aa9.09□□□□□ -0.95
LETMD1-233ENST00000552433 PPM1HQ9ULR3 514 aa9.09□□□□□ -0.95
LETMD1-233ENST00000552433 TRIM37O94972 964 aa9.08□□□□□ -0.96
LETMD1-233ENST00000552433 ZNF326Q5BKZ1 582 aaKnown RBP9.08□□□□□ -0.96
LETMD1-233ENST00000552433 LCE3BQ5TA77 95 aa9.08□□□□□ -0.96
LETMD1-233ENST00000552433 PCNX4Q63HM2 1172 aa9.08□□□□□ -0.96
LETMD1-233ENST00000552433 OXCT1P55809 520 aa9.07□□□□□ -0.96
LETMD1-233ENST00000552433 PTPN11Q06124 597 aaPredicted RBP9.07□□□□□ -0.96
LETMD1-233ENST00000552433 LRRC14Q15048 493 aa9.07□□□□□ -0.96
LETMD1-233ENST00000552433 PLCL1Q15111 1095 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms