RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 LRRC56Q8IYG6 542 aaPredicted RBP7.37□□□□□ -1.23
USP44-207ENST00000552237 DISC1Q9NRI5 854 aa7.37□□□□□ -1.23
USP44-207ENST00000552237 SERPINA10Q9UK55 444 aa7.37□□□□□ -1.23
USP44-207ENST00000552237 BRPF3Q9ULD4 1205 aa7.37□□□□□ -1.23
USP44-207ENST00000552237 PLAGL2Q9UPG8 496 aa7.37□□□□□ -1.23
USP44-207ENST00000552237 SNX11Q9Y5W9 270 aa7.37□□□□□ -1.23
USP44-207ENST00000552237 ZNF503-AS2A6NEH8 195 aa7.36□□□□□ -1.23
USP44-207ENST00000552237 ZNF862O60290 1169 aa7.36□□□□□ -1.23
USP44-207ENST00000552237 GSTP1P09211 210 aaKnown RBP7.36□□□□□ -1.23
USP44-207ENST00000552237 CFPP27918 469 aa7.36□□□□□ -1.23
USP44-207ENST00000552237 KIF4BQ2VIQ3 1234 aa7.36□□□□□ -1.23
USP44-207ENST00000552237 LILRA6Q6PI73 481 aa7.36□□□□□ -1.23
USP44-207ENST00000552237 ANKLE2Q86XL3 938 aa7.36□□□□□ -1.23
USP44-207ENST00000552237 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.36□□□□□ -1.23
USP44-207ENST00000552237 CCER1Q8TC90 406 aaPredicted RBP7.36□□□□□ -1.23
USP44-207ENST00000552237 LIN37Q96GY3 246 aaPredicted RBP7.36□□□□□ -1.23
USP44-207ENST00000552237 CPNE3O75131 537 aaKnown RBP7.35□□□□□ -1.23
USP44-207ENST00000552237 GADD45BO75293 160 aaPredicted RBP7.35□□□□□ -1.23
USP44-207ENST00000552237 RPS26P11Q5JNZ5 115 aaPredicted RBP7.35□□□□□ -1.23
USP44-207ENST00000552237 SYDE1Q6ZW31 735 aaPredicted RBP7.35□□□□□ -1.23
USP44-207ENST00000552237 KRT82Q9NSB4 513 aa7.35□□□□□ -1.23
USP44-207ENST00000552237 GTF2IRD1Q9UHL9 959 aa7.35□□□□□ -1.23
USP44-207ENST00000552237 KRTAP9-7A8MTY7 169 aa7.34□□□□□ -1.23
USP44-207ENST00000552237 AFMP43652 599 aa7.34□□□□□ -1.23
USP44-207ENST00000552237 KCNB2Q92953 911 aa7.34□□□□□ -1.23
USP44-207ENST00000552237 ABCB6Q9NP58 842 aa7.34□□□□□ -1.23
USP44-207ENST00000552237 PPP2R3AQ06190 1150 aa7.33□□□□□ -1.24
USP44-207ENST00000552237 TNKS2Q9H2K2 1166 aa7.33□□□□□ -1.24
USP44-207ENST00000552237 GPN3Q9UHW5 284 aaPredicted RBP7.33□□□□□ -1.24
USP44-207ENST00000552237 TRAK1Q9UPV9 953 aa7.33□□□□□ -1.24
USP44-207ENST00000552237 CTNND2Q9UQB3 1225 aa7.33□□□□□ -1.24
USP44-207ENST00000552237 TMEM238LA0A1B0GVL6 79 aa7.32□□□□□ -1.24
USP44-207ENST00000552237 ZSCAN22P10073 491 aaPredicted RBP7.32□□□□□ -1.24
USP44-207ENST00000552237 PRPF40BQ6NWY9 871 aaKnown RBP7.32□□□□□ -1.24
USP44-207ENST00000552237 ISL2Q96A47 359 aa7.32□□□□□ -1.24
USP44-207ENST00000552237 PCDHGC5Q9Y5F6 944 aa7.32□□□□□ -1.24
USP44-207ENST00000552237 TMEM88BA6NKF7 163 aa7.31□□□□□ -1.24
USP44-207ENST00000552237 GNAT3A8MTJ3 354 aa7.31□□□□□ -1.24
USP44-207ENST00000552237 NFIBO00712 420 aa7.31□□□□□ -1.24
USP44-207ENST00000552237 NDUFB5O43674 189 aa7.31□□□□□ -1.24
USP44-207ENST00000552237 NEFMP07197 916 aa7.31□□□□□ -1.24
USP44-207ENST00000552237 GLI1P08151 1106 aa7.31□□□□□ -1.24
USP44-207ENST00000552237 FAAP100Q0VG06 881 aa7.31□□□□□ -1.24
USP44-207ENST00000552237 PDE3BQ13370 1112 aa7.31□□□□□ -1.24
USP44-207ENST00000552237 ORC1Q13415 861 aa7.31□□□□□ -1.24
USP44-207ENST00000552237 LCNL1Q6ZST4 164 aa7.31□□□□□ -1.24
USP44-207ENST00000552237 CILP2Q8IUL8 1156 aa7.31□□□□□ -1.24
USP44-207ENST00000552237 KIRREL1Q96J84 757 aa7.31□□□□□ -1.24
USP44-207ENST00000552237 LMCD1Q9NZU5 365 aa7.31□□□□□ -1.24
USP44-207ENST00000552237 TMEM67Q5HYA8 995 aa7.3□□□□□ -1.24
USP44-207ENST00000552237 DTHD1Q6ZMT9 781 aa7.3□□□□□ -1.24
USP44-207ENST00000552237 PRR23BQ6ZRT6 265 aa7.3□□□□□ -1.24
USP44-207ENST00000552237 C14orf37Q86TY3 774 aa7.3□□□□□ -1.24
USP44-207ENST00000552237 SIAH1Q8IUQ4 282 aa7.3□□□□□ -1.24
USP44-207ENST00000552237 HEXIM2Q96MH2 286 aaKnown RBP7.3□□□□□ -1.24
USP44-207ENST00000552237 PICK1Q9NRD5 415 aa7.3□□□□□ -1.24
USP44-207ENST00000552237 NCANO14594 1321 aa7.29□□□□□ -1.24
USP44-207ENST00000552237 B8ZZF3 427 aa7.29□□□□□ -1.24
USP44-207ENST00000552237 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.29□□□□□ -1.24
USP44-207ENST00000552237 PRRG2O14669 202 aa7.29□□□□□ -1.24
USP44-207ENST00000552237 FYB2Q5VWT5 728 aa7.29□□□□□ -1.24
USP44-207ENST00000552237 CYFIP1Q7L576 1253 aa7.29□□□□□ -1.24
USP44-207ENST00000552237 C1QL4Q86Z23 238 aa7.29□□□□□ -1.24
USP44-207ENST00000552237 GLYCTKQ8IVS8 523 aa7.29□□□□□ -1.24
USP44-207ENST00000552237 SPACA3Q8IXA5 215 aa7.29□□□□□ -1.24
USP44-207ENST00000552237 RNF214Q8ND24 703 aa7.29□□□□□ -1.24
USP44-207ENST00000552237 CCDC74AQ96AQ1 378 aa7.29□□□□□ -1.24
USP44-207ENST00000552237 ACSBG1Q96GR2 724 aa7.29□□□□□ -1.24
USP44-207ENST00000552237 KRTAP4-5Q9BYR2 181 aa7.29□□□□□ -1.24
USP44-207ENST00000552237 TMEM39AQ9NV64 488 aa7.29□□□□□ -1.24
USP44-207ENST00000552237 H3BRB1 525 aa7.28□□□□□ -1.24
USP44-207ENST00000552237 CLCN7P51798 805 aa7.28□□□□□ -1.24
USP44-207ENST00000552237 TUT1Q9H6E5 874 aaKnown RBP7.28□□□□□ -1.24
USP44-207ENST00000552237 PRDM10Q9NQV6 1147 aa7.28□□□□□ -1.24
USP44-207ENST00000552237 IGF2BP3O00425 579 aaKnown RBP eCLIP7.27□□□□□ -1.25
USP44-207ENST00000552237 C1QTNF9P0C862 333 aa7.27□□□□□ -1.25
USP44-207ENST00000552237 ERVK-24P63145 666 aa7.27□□□□□ -1.25
USP44-207ENST00000552237 ECM1Q16610 540 aa7.27□□□□□ -1.25
USP44-207ENST00000552237 MAP1SQ66K74 1059 aaPredicted RBP7.27□□□□□ -1.25
USP44-207ENST00000552237 SULF2Q8IWU5 870 aa7.27□□□□□ -1.25
USP44-207ENST00000552237 FBXO15Q8NCQ5 510 aaPredicted RBP7.27□□□□□ -1.25
USP44-207ENST00000552237 TMC1Q8TDI8 760 aa7.27□□□□□ -1.25
USP44-207ENST00000552237 DIRC2Q96SL1 478 aa7.27□□□□□ -1.25
USP44-207ENST00000552237 PPP4R2Q9NY27 417 aa7.27□□□□□ -1.25
USP44-207ENST00000552237 FCGRTP55899 365 aa7.26□□□□□ -1.25
USP44-207ENST00000552237 GRM2Q14416 872 aa7.26□□□□□ -1.25
USP44-207ENST00000552237 ZC3H12AQ5D1E8 599 aaKnown RBP7.26□□□□□ -1.25
USP44-207ENST00000552237 DNAJC25Q9H1X3 360 aa7.26□□□□□ -1.25
USP44-207ENST00000552237 NSUN3Q9H649 340 aaKnown RBP7.26□□□□□ -1.25
USP44-207ENST00000552237 CARS2Q9HA77 564 aaKnown RBP7.26□□□□□ -1.25
USP44-207ENST00000552237 EGFL7Q9UHF1 273 aa7.26□□□□□ -1.25
USP44-207ENST00000552237 PITPNM2Q9BZ72 1349 aa7.26□□□□□ -1.25
USP44-207ENST00000552237 EIF1AYO14602 144 aaKnown RBP7.25□□□□□ -1.25
USP44-207ENST00000552237 ICMTO60725 284 aa7.25□□□□□ -1.25
USP44-207ENST00000552237 TMEM253P0C7T8 217 aa7.25□□□□□ -1.25
USP44-207ENST00000552237 PDZD3Q86UT5 571 aa7.25□□□□□ -1.25
USP44-207ENST00000552237 EMILIN2Q9BXX0 1053 aa7.25□□□□□ -1.25
USP44-207ENST00000552237 FOXQ1Q9C009 403 aa7.25□□□□□ -1.25
USP44-207ENST00000552237 CBX8Q9HC52 389 aa7.25□□□□□ -1.25
USP44-207ENST00000552237 PRDM5Q9NQX1 630 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms