RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260		A0A1B0GUL6	1792 aa		7.86	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PTPRF	P10586	1907 aa		7.86	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PLXNB2	O15031	1838 aa		7.85	□□□□□ -1.15
RACGAP1-223	ENST00000551260	CLRN2	A0PK11	232 aa		7.85	□□□□□ -1.15
RACGAP1-223	ENST00000551260	BTBD19	C9JJ37	291 aa		7.85	□□□□□ -1.15
RACGAP1-223	ENST00000551260	RNF40	O75150	1001 aa		7.85	□□□□□ -1.15
RACGAP1-223	ENST00000551260	INHA	P05111	366 aa		7.85	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PRKAR2B	P31323	418 aa		7.85	□□□□□ -1.15
RACGAP1-223	ENST00000551260	MAP2K5	Q13163	448 aa		7.85	□□□□□ -1.15
RACGAP1-223	ENST00000551260	SF3B3	Q15393	1217 aa	Known RBP	7.85	□□□□□ -1.15
RACGAP1-223	ENST00000551260	C17orf99	Q6UX52	265 aa		7.85	□□□□□ -1.15
RACGAP1-223	ENST00000551260	NECAB2	Q7Z6G3	386 aa		7.85	□□□□□ -1.15
RACGAP1-223	ENST00000551260	ALYREF	Q86V81	257 aa	Known RBP	7.85	□□□□□ -1.15
RACGAP1-223	ENST00000551260	SLF2	Q8IX21	1173 aa		7.85	□□□□□ -1.15
RACGAP1-223	ENST00000551260	SEMA6B	Q9H3T3	888 aa		7.85	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PLXNA1	Q9UIW2	1896 aa		7.84	□□□□□ -1.15
RACGAP1-223	ENST00000551260	UNCX	A6NJT0	531 aa		7.84	□□□□□ -1.15
RACGAP1-223	ENST00000551260	IRF6	O14896	467 aa		7.84	□□□□□ -1.15
RACGAP1-223	ENST00000551260	GTF2A2	P52657	109 aa		7.84	□□□□□ -1.15
RACGAP1-223	ENST00000551260	EIF4A1	P60842	406 aa	Known RBP	7.84	□□□□□ -1.15
RACGAP1-223	ENST00000551260	AIMP1	Q12904	312 aa	Known RBP	7.84	□□□□□ -1.15
RACGAP1-223	ENST00000551260	TAF7	Q15545	349 aa	Predicted RBP	7.84	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	7.84	□□□□□ -1.15
RACGAP1-223	ENST00000551260	NLRP7	Q8WX94	980 aa		7.84	□□□□□ -1.15
RACGAP1-223	ENST00000551260	RTF1	Q92541	710 aa	Known RBP	7.84	□□□□□ -1.15
RACGAP1-223	ENST00000551260	FAM89A	Q96GI7	184 aa		7.84	□□□□□ -1.15
RACGAP1-223	ENST00000551260	TTYH1	Q9H313	450 aa	Predicted RBP	7.84	□□□□□ -1.15
RACGAP1-223	ENST00000551260	GBF1	Q92538	1859 aa		7.83	□□□□□ -1.16
RACGAP1-223	ENST00000551260	ADCY3	O60266	1144 aa		7.83	□□□□□ -1.16
RACGAP1-223	ENST00000551260	FOSL2	P15408	326 aa		7.83	□□□□□ -1.16
RACGAP1-223	ENST00000551260	HOXD10	P28358	340 aa		7.83	□□□□□ -1.16
RACGAP1-223	ENST00000551260	VGLL4	Q14135	290 aa		7.83	□□□□□ -1.16
RACGAP1-223	ENST00000551260	SUPT20HL1	Q3ZLR7	823 aa		7.83	□□□□□ -1.16
RACGAP1-223	ENST00000551260	RSPH6A	Q9H0K4	717 aa		7.83	□□□□□ -1.16
RACGAP1-223	ENST00000551260	VEZT	Q9HBM0	779 aa		7.83	□□□□□ -1.16
RACGAP1-223	ENST00000551260	PAK6	Q9NQU5	681 aa	Predicted RBP	7.83	□□□□□ -1.16
RACGAP1-223	ENST00000551260	ZNF804B	A4D1E1	1349 aa		7.82	□□□□□ -1.16
RACGAP1-223	ENST00000551260	ADGRA2	Q96PE1	1338 aa		7.82	□□□□□ -1.16
RACGAP1-223	ENST00000551260	ZMYND10	O75800	440 aa		7.82	□□□□□ -1.16
RACGAP1-223	ENST00000551260	DLGAP5	Q15398	846 aa		7.82	□□□□□ -1.16
RACGAP1-223	ENST00000551260	COPS6	Q7L5N1	327 aa		7.82	□□□□□ -1.16
RACGAP1-223	ENST00000551260	TXNRD3	Q86VQ6	643 aa		7.82	□□□□□ -1.16
RACGAP1-223	ENST00000551260	ADAMTS19	Q8TE59	1207 aa		7.82	□□□□□ -1.16
RACGAP1-223	ENST00000551260	XAGE3	Q8WTP9	111 aa		7.82	□□□□□ -1.16
RACGAP1-223	ENST00000551260	CCDC85A	Q96PX6	553 aa	Predicted RBP	7.82	□□□□□ -1.16
RACGAP1-223	ENST00000551260	FAM205A	Q6ZU69	1335 aa		7.81	□□□□□ -1.16
RACGAP1-223	ENST00000551260	MYO3B	Q8WXR4	1341 aa		7.81	□□□□□ -1.16
RACGAP1-223	ENST00000551260	ATP5J2-PTCD1	G3V325	749 aa		7.81	□□□□□ -1.16
RACGAP1-223	ENST00000551260	EIF2S2	P20042	333 aa	Known RBP	7.81	□□□□□ -1.16
RACGAP1-223	ENST00000551260	RASA3	Q14644	834 aa		7.81	□□□□□ -1.16
RACGAP1-223	ENST00000551260	STRIP1	Q5VSL9	837 aa		7.81	□□□□□ -1.16
RACGAP1-223	ENST00000551260	TTLL5	Q6EMB2	1281 aa		7.81	□□□□□ -1.16
RACGAP1-223	ENST00000551260	PRMT6	Q96LA8	375 aa	Predicted RBP	7.81	□□□□□ -1.16
RACGAP1-223	ENST00000551260	C11orf49	Q9H6J7	331 aa		7.81	□□□□□ -1.16
RACGAP1-223	ENST00000551260	KNSTRN	Q9Y448	316 aa		7.81	□□□□□ -1.16
RACGAP1-223	ENST00000551260	PPP2R3B	Q9Y5P8	575 aa		7.81	□□□□□ -1.16
RACGAP1-223	ENST00000551260	PFAS	O15067	1338 aa		7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	XDH	P47989	1333 aa		7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	RLF	Q13129	1914 aa		7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260		F8W031	263 aa	Predicted RBP	7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	IRS4	O14654	1257 aa	Predicted RBP	7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	WDHD1	O75717	1129 aa	Predicted RBP	7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	CETP	P11597	493 aa		7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	ATP2B4	P23634	1241 aa		7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	KLRK1	P26718	216 aa		7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	FLT3LG	P49771	235 aa		7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	GTF2I	P78347	998 aa		7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	HSP90AB3P	Q58FF7	597 aa		7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	CERS5	Q8N5B7	392 aa		7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	NECAB3	Q96P71	396 aa	Predicted RBP	7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	MED23	Q9ULK4	1368 aa		7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	PHIP	Q8WWQ0	1821 aa		7.8	□□□□□ -1.16
RACGAP1-223	ENST00000551260	PDHX	O00330	501 aa		7.79	□□□□□ -1.16
RACGAP1-223	ENST00000551260	FCGRT	P55899	365 aa		7.79	□□□□□ -1.16
RACGAP1-223	ENST00000551260	CNGB1	Q14028	1251 aa	Predicted RBP	7.79	□□□□□ -1.16
RACGAP1-223	ENST00000551260	CFAP100	Q494V2	611 aa		7.79	□□□□□ -1.16
RACGAP1-223	ENST00000551260	CC2D1B	Q5T0F9	858 aa	Known RBP	7.79	□□□□□ -1.16
RACGAP1-223	ENST00000551260	HELB	Q8NG08	1087 aa	Predicted RBP	7.79	□□□□□ -1.16
RACGAP1-223	ENST00000551260	PPM1E	Q8WY54	764 aa		7.79	□□□□□ -1.16
RACGAP1-223	ENST00000551260	TEPSIN	Q96N21	525 aa		7.79	□□□□□ -1.16
RACGAP1-223	ENST00000551260	UHRF1	Q96T88	793 aa	Predicted RBP	7.79	□□□□□ -1.16
RACGAP1-223	ENST00000551260	LRFN3	Q9BTN0	628 aa		7.79	□□□□□ -1.16
RACGAP1-223	ENST00000551260	ZCCHC17	Q9NP64	241 aa	Known RBP	7.79	□□□□□ -1.16
RACGAP1-223	ENST00000551260	DAXX	Q9UER7	740 aa	Predicted RBP	7.79	□□□□□ -1.16
RACGAP1-223	ENST00000551260	HCN4	Q9Y3Q4	1203 aa		7.79	□□□□□ -1.16
RACGAP1-223	ENST00000551260	SNCAIP	Q9Y6H5	919 aa		7.79	□□□□□ -1.16
RACGAP1-223	ENST00000551260	SPDYE5	A6NIY4	337 aa		7.78	□□□□□ -1.16
RACGAP1-223	ENST00000551260	SLC4A3	P48751	1232 aa		7.78	□□□□□ -1.16
RACGAP1-223	ENST00000551260	TRIM32	Q13049	653 aa		7.78	□□□□□ -1.16
RACGAP1-223	ENST00000551260	SHH	Q15465	462 aa		7.78	□□□□□ -1.16
RACGAP1-223	ENST00000551260	LRRC26	Q2I0M4	334 aa		7.78	□□□□□ -1.16
RACGAP1-223	ENST00000551260	ANKLE1	Q8NAG6	615 aa		7.78	□□□□□ -1.16
RACGAP1-223	ENST00000551260	JARID2	Q92833	1246 aa	Predicted RBP	7.78	□□□□□ -1.16
RACGAP1-223	ENST00000551260	ZKSCAN4	Q969J2	545 aa	Predicted RBP	7.78	□□□□□ -1.16
RACGAP1-223	ENST00000551260	CSAD	Q9Y600	493 aa		7.78	□□□□□ -1.16
RACGAP1-223	ENST00000551260	CYP2C8	P10632	490 aa		7.77	□□□□□ -1.17
RACGAP1-223	ENST00000551260	BCR	P11274	1271 aa		7.77	□□□□□ -1.17
RACGAP1-223	ENST00000551260	SNAPC2	Q13487	334 aa		7.77	□□□□□ -1.17

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