RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 NFIAQ12857 509 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 NECTIN1Q15223 517 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 ALX1Q15699 326 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 NBPF9Q3BBW0 867 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 RNF20Q5VTR2 975 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 RASEFQ8IZ41 740 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 MTMR14Q8NCE2 650 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 TRPM4Q8TD43 1214 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 DDX4Q9NQI0 724 aaKnown RBP9.69□□□□□ -0.86
GPN3-207ENST00000550228 ATP8A2Q9NTI2 1148 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 MCM9Q9NXL9 1143 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 ZNF70Q9UC06 446 aaPredicted RBP9.69□□□□□ -0.86
GPN3-207ENST00000550228 SNX14Q9Y5W7 946 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 TAF6LQ9Y6J9 622 aa9.69□□□□□ -0.86
GPN3-207ENST00000550228 ASTN2O75129 1339 aaPredicted RBP9.68□□□□□ -0.86
GPN3-207ENST00000550228 GLTPD2A6NH11 291 aa9.68□□□□□ -0.86
GPN3-207ENST00000550228 SMIM22K7EJ46 135 aa9.68□□□□□ -0.86
GPN3-207ENST00000550228 WNT10BO00744 389 aa9.68□□□□□ -0.86
GPN3-207ENST00000550228 ZNF213O14771 459 aa9.68□□□□□ -0.86
GPN3-207ENST00000550228 POLR3DP05423 398 aaPredicted RBP9.68□□□□□ -0.86
GPN3-207ENST00000550228 ZKSCAN1P17029 563 aaPredicted RBP9.68□□□□□ -0.86
GPN3-207ENST00000550228 EVX2Q03828 476 aa9.68□□□□□ -0.86
GPN3-207ENST00000550228 PPARAQ07869 468 aa9.68□□□□□ -0.86
GPN3-207ENST00000550228 SPDYE2Q495Y8 402 aa9.68□□□□□ -0.86
GPN3-207ENST00000550228 GIMAP6Q6P9H5 292 aa9.68□□□□□ -0.86
GPN3-207ENST00000550228 CTR9Q6PD62 1173 aa9.68□□□□□ -0.86
GPN3-207ENST00000550228 TBC1D10CQ8IV04 446 aa9.68□□□□□ -0.86
GPN3-207ENST00000550228 AMOTL1Q8IY63 956 aa9.68□□□□□ -0.86
GPN3-207ENST00000550228 ZBED3Q96IU2 234 aaPredicted RBP9.68□□□□□ -0.86
GPN3-207ENST00000550228 JAKMIP1Q96N16 626 aaKnown RBP9.68□□□□□ -0.86
GPN3-207ENST00000550228 OSBPL5Q9H0X9 879 aaPredicted RBP9.68□□□□□ -0.86
GPN3-207ENST00000550228 ARPP21Q9UBL0 812 aaPredicted RBP9.68□□□□□ -0.86
GPN3-207ENST00000550228 MYH8P13535 1937 aa9.67□□□□□ -0.86
GPN3-207ENST00000550228 MMP14P50281 582 aa9.67□□□□□ -0.86
GPN3-207ENST00000550228 ADCK5Q3MIX3 580 aa9.67□□□□□ -0.86
GPN3-207ENST00000550228 STOX1Q6ZVD7 989 aa9.67□□□□□ -0.86
GPN3-207ENST00000550228 ZFPM1Q8IX07 1006 aa9.67□□□□□ -0.86
GPN3-207ENST00000550228 KCNB2Q92953 911 aa9.67□□□□□ -0.86
GPN3-207ENST00000550228 IDI2Q9BXS1 227 aa9.67□□□□□ -0.86
GPN3-207ENST00000550228 NBPF3Q9H094 633 aa9.67□□□□□ -0.86
GPN3-207ENST00000550228 ADARB2Q9NS39 739 aaKnown RBP9.67□□□□□ -0.86
GPN3-207ENST00000550228 TOMM22Q9NS69 142 aa9.67□□□□□ -0.86
GPN3-207ENST00000550228 FAM198AQ9UFP1 575 aa9.67□□□□□ -0.86
GPN3-207ENST00000550228 MKRN1Q9UHC7 482 aaKnown RBP9.67□□□□□ -0.86
GPN3-207ENST00000550228 HACL1Q9UJ83 578 aa9.67□□□□□ -0.86
GPN3-207ENST00000550228 SCAF8Q9UPN6 1271 aaKnown RBP9.67□□□□□ -0.86
GPN3-207ENST00000550228 SCN4AP35499 1836 aa9.67□□□□□ -0.86
GPN3-207ENST00000550228 WDR90Q96KV7 1748 aa9.67□□□□□ -0.86
GPN3-207ENST00000550228 SIPA1L1O43166 1804 aa9.66□□□□□ -0.86
GPN3-207ENST00000550228 NEDD4P46934 1319 aa9.66□□□□□ -0.86
GPN3-207ENST00000550228 E7EWF7 191 aa9.66□□□□□ -0.86
GPN3-207ENST00000550228 HLA-DOAP06340 250 aa9.66□□□□□ -0.86
GPN3-207ENST00000550228 CPA1P15085 419 aa9.66□□□□□ -0.86
GPN3-207ENST00000550228 CASTP20810 708 aaKnown RBP9.66□□□□□ -0.86
GPN3-207ENST00000550228 ANAPC15P60006 121 aa9.66□□□□□ -0.86
GPN3-207ENST00000550228 SBK1Q52WX2 424 aa9.66□□□□□ -0.86
GPN3-207ENST00000550228 RRP12Q5JTH9 1297 aaKnown RBP9.66□□□□□ -0.86
GPN3-207ENST00000550228 ANGEL2Q5VTE6 544 aaKnown RBP9.66□□□□□ -0.86
GPN3-207ENST00000550228 ZSCAN29Q8IWY8 852 aaPredicted RBP9.66□□□□□ -0.86
GPN3-207ENST00000550228 DYNLL2Q96FJ2 89 aa9.66□□□□□ -0.86
GPN3-207ENST00000550228 L3MBTL3Q96JM7 780 aaPredicted RBP9.66□□□□□ -0.86
GPN3-207ENST00000550228 KIF2CQ99661 725 aa9.66□□□□□ -0.86
GPN3-207ENST00000550228 UPF3BQ9BZI7 483 aaKnown RBP9.66□□□□□ -0.86
GPN3-207ENST00000550228 INCENPQ9NQS7 918 aa9.66□□□□□ -0.86
GPN3-207ENST00000550228 GGA3Q9NZ52 723 aa9.66□□□□□ -0.86
GPN3-207ENST00000550228 RBM19Q9Y4C8 960 aaKnown RBP9.66□□□□□ -0.86
GPN3-207ENST00000550228 TACC3Q9Y6A5 838 aa9.66□□□□□ -0.86
GPN3-207ENST00000550228 CNTNAP1P78357 1384 aa9.65□□□□□ -0.86
GPN3-207ENST00000550228 POLR2AP24928 1970 aaKnown RBP9.65□□□□□ -0.86
GPN3-207ENST00000550228 DDTLA6NHG4 134 aaPredicted RBP9.65□□□□□ -0.86
GPN3-207ENST00000550228 ENTPD3O75355 529 aa9.65□□□□□ -0.86
GPN3-207ENST00000550228 PRDM1O75626 825 aa9.65□□□□□ -0.86
GPN3-207ENST00000550228 SLC3A2P08195 630 aaKnown RBP9.65□□□□□ -0.86
GPN3-207ENST00000550228 PSMA5P28066 241 aa9.65□□□□□ -0.86
GPN3-207ENST00000550228 EPHX2P34913 555 aa9.65□□□□□ -0.86
GPN3-207ENST00000550228 TNNI2P48788 182 aa9.65□□□□□ -0.86
GPN3-207ENST00000550228 PLCD1P51178 756 aa9.65□□□□□ -0.86
GPN3-207ENST00000550228 HIRAP54198 1017 aaPredicted RBP9.65□□□□□ -0.86
GPN3-207ENST00000550228 KRT32Q14532 448 aa9.65□□□□□ -0.86
GPN3-207ENST00000550228 RABEP1Q15276 862 aa9.65□□□□□ -0.86
GPN3-207ENST00000550228 EAPPQ56P03 285 aaPredicted RBP9.65□□□□□ -0.86
GPN3-207ENST00000550228 AKNAD1Q5T1N1 836 aa9.65□□□□□ -0.86
GPN3-207ENST00000550228 C12orf60Q5U649 245 aa9.65□□□□□ -0.86
GPN3-207ENST00000550228 MFSD6Q6ZSS7 791 aa9.65□□□□□ -0.86
GPN3-207ENST00000550228 SH3BP5LQ7L8J4 393 aa9.65□□□□□ -0.86
GPN3-207ENST00000550228 RALYLQ86SE5 291 aaKnown RBP9.65□□□□□ -0.86
GPN3-207ENST00000550228 SLC44A5Q8NCS7 719 aa9.65□□□□□ -0.86
GPN3-207ENST00000550228 ZNF526Q8TF50 670 aaPredicted RBP9.65□□□□□ -0.86
GPN3-207ENST00000550228 TMEM39BQ9GZU3 492 aa9.65□□□□□ -0.86
GPN3-207ENST00000550228 IQCA1LA6NCM1 817 aa9.64□□□□□ -0.87
GPN3-207ENST00000550228 FAM196BA6NMK8 535 aa9.64□□□□□ -0.87
GPN3-207ENST00000550228 B4E1Z4 1266 aa9.64□□□□□ -0.87
GPN3-207ENST00000550228 NPM3O75607 178 aaKnown RBP9.64□□□□□ -0.87
GPN3-207ENST00000550228 TRDNQ13061 729 aa9.64□□□□□ -0.87
GPN3-207ENST00000550228 TNFAIP1Q13829 316 aa9.64□□□□□ -0.87
GPN3-207ENST00000550228 COL9A3Q14050 684 aaPredicted RBP9.64□□□□□ -0.87
GPN3-207ENST00000550228 TSGA10IPQ3SY00 556 aa9.64□□□□□ -0.87
GPN3-207ENST00000550228 BLOC1S2Q6QNY1 142 aa9.64□□□□□ -0.87
GPN3-207ENST00000550228 TTC6Q86TZ1 520 aa9.64□□□□□ -0.87
GPN3-207ENST00000550228 CDAN1Q8IWY9 1227 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms