RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 ELP1O95163 1332 aa22.39■■□□□ 1.17
BRF1-215ENST00000549655 ADD1P35611 737 aaKnown RBP22.39■■□□□ 1.17
BRF1-215ENST00000549655 ZKSCAN3Q9BRR0 538 aa22.39■■□□□ 1.17
BRF1-215ENST00000549655 MTA3Q9BTC8 594 aa22.39■■□□□ 1.17
BRF1-215ENST00000549655 PANK2Q9BZ23 570 aa22.39■■□□□ 1.17
BRF1-215ENST00000549655 TNS1Q9HBL0 1735 aaKnown RBP22.39■■□□□ 1.17
BRF1-215ENST00000549655 SLC12A7Q9Y666 1083 aa22.39■■□□□ 1.17
BRF1-215ENST00000549655 CCDC69A6NI79 296 aa22.38■■□□□ 1.17
BRF1-215ENST00000549655 GUCY1B3Q02153 619 aa22.38■■□□□ 1.17
BRF1-215ENST00000549655 SP8Q8IXZ3 490 aa22.38■■□□□ 1.17
BRF1-215ENST00000549655 ATP8A2Q9NTI2 1148 aa22.38■■□□□ 1.17
BRF1-215ENST00000549655 RGS17Q9UGC6 210 aaPredicted RBP22.38■■□□□ 1.17
BRF1-215ENST00000549655 USP17L12C9JPN9 530 aa22.38■■□□□ 1.17
BRF1-215ENST00000549655 USP17L21D6R901 530 aa22.38■■□□□ 1.17
BRF1-215ENST00000549655 SRGNP10124 158 aa22.38■■□□□ 1.17
BRF1-215ENST00000549655 IL1R1P14778 569 aa22.38■■□□□ 1.17
BRF1-215ENST00000549655 CDC27P30260 824 aa22.38■■□□□ 1.17
BRF1-215ENST00000549655 WTAPQ15007 396 aa22.38■■□□□ 1.17
BRF1-215ENST00000549655 ESR2Q92731 530 aa22.38■■□□□ 1.17
BRF1-215ENST00000549655 SPATA32Q96LK8 384 aa22.38■■□□□ 1.17
BRF1-215ENST00000549655 MYL10Q9BUA6 226 aa22.38■■□□□ 1.17
BRF1-215ENST00000549655 DCP1AQ9NPI6 582 aaPredicted RBP22.38■■□□□ 1.17
BRF1-215ENST00000549655 PARP3Q9Y6F1 533 aa22.38■■□□□ 1.17
BRF1-215ENST00000549655 ERICH2A1L162 156 aa22.37■■□□□ 1.17
BRF1-215ENST00000549655 C6orf229H3BNL8 230 aa22.37■■□□□ 1.17
BRF1-215ENST00000549655 GRIK5Q16478 980 aa22.37■■□□□ 1.17
BRF1-215ENST00000549655 LRSAM1Q6UWE0 723 aa22.37■■□□□ 1.17
BRF1-215ENST00000549655 CCDC144CPQ8IYA2 1237 aa22.37■■□□□ 1.17
BRF1-215ENST00000549655 C8orf76Q96K31 380 aa22.37■■□□□ 1.17
BRF1-215ENST00000549655 LRRC37AA6NMS7 1700 aa22.36■■□□□ 1.17
BRF1-215ENST00000549655 GOLGA8AA7E2F4 631 aa22.36■■□□□ 1.17
BRF1-215ENST00000549655 CDKL5O76039 1030 aa22.36■■□□□ 1.17
BRF1-215ENST00000549655 NPR1P16066 1061 aa22.36■■□□□ 1.17
BRF1-215ENST00000549655 GSTO1P78417 241 aa22.36■■□□□ 1.17
BRF1-215ENST00000549655 MSL1Q68DK7 614 aa22.36■■□□□ 1.17
BRF1-215ENST00000549655 CPLX2Q6PUV4 134 aaKnown RBP22.36■■□□□ 1.17
BRF1-215ENST00000549655 SYNE3Q6ZMZ3 975 aa22.36■■□□□ 1.17
BRF1-215ENST00000549655 LEO1Q8WVC0 666 aaPredicted RBP22.36■■□□□ 1.17
BRF1-215ENST00000549655 ATP6V0A2Q9Y487 856 aa22.36■■□□□ 1.17
BRF1-215ENST00000549655 KIAA1551Q9HCM1 1747 aa22.36■■□□□ 1.17
BRF1-215ENST00000549655 TMTC2Q8N394 836 aa22.36■■□□□ 1.17
BRF1-215ENST00000549655 UBAC1Q9BSL1 405 aa22.36■■□□□ 1.17
BRF1-215ENST00000549655 FAM217BQ9NTX9 383 aaPredicted RBP22.36■■□□□ 1.17
BRF1-215ENST00000549655 PDE6BP35913 854 aa22.35■■□□□ 1.17
BRF1-215ENST00000549655 CCDC183Q5T5S1 534 aa22.35■■□□□ 1.17
BRF1-215ENST00000549655 POTEAQ6S8J7 498 aa22.35■■□□□ 1.17
BRF1-215ENST00000549655 CFAP45Q9UL16 551 aa22.35■■□□□ 1.17
BRF1-215ENST00000549655 LTBP1Q14766 1721 aa22.35■■□□□ 1.17
BRF1-215ENST00000549655 FGRP09769 529 aa22.34■■□□□ 1.17
BRF1-215ENST00000549655 PCP11498 1178 aaKnown RBP22.34■■□□□ 1.17
BRF1-215ENST00000549655 DIXDC1Q155Q3 683 aa22.34■■□□□ 1.17
BRF1-215ENST00000549655 OTUD7BQ6GQQ9 843 aa22.34■■□□□ 1.17
BRF1-215ENST00000549655 FBXO18Q8NFZ0 1043 aa22.34■■□□□ 1.17
BRF1-215ENST00000549655 DUOX1Q9NRD9 1551 aa22.34■■□□□ 1.17
BRF1-215ENST00000549655 RGPD3A6NKT7 1758 aaPredicted RBP22.34■■□□□ 1.17
BRF1-215ENST00000549655 RGPD4Q7Z3J3 1758 aa22.34■■□□□ 1.17
BRF1-215ENST00000549655 MYH2Q9UKX2 1941 aa22.33■■□□□ 1.17
BRF1-215ENST00000549655 MYH15Q9Y2K3 1946 aa22.33■■□□□ 1.17
BRF1-215ENST00000549655 NTRK3Q16288 839 aa22.33■■□□□ 1.17
BRF1-215ENST00000549655 ARPP21Q9UBL0 812 aaPredicted RBP22.33■■□□□ 1.17
BRF1-215ENST00000549655 RANBP6O60518 1105 aaKnown RBP22.32■■□□□ 1.16
BRF1-215ENST00000549655 PRDM1O75626 825 aa22.32■■□□□ 1.16
BRF1-215ENST00000549655 LDHCP07864 332 aa22.32■■□□□ 1.16
BRF1-215ENST00000549655 ALDH1B1P30837 517 aa22.32■■□□□ 1.16
BRF1-215ENST00000549655 EVX2Q03828 476 aa22.32■■□□□ 1.16
BRF1-215ENST00000549655 SBK1Q52WX2 424 aa22.32■■□□□ 1.16
BRF1-215ENST00000549655 ILDR1Q86SU0 546 aaPredicted RBP22.32■■□□□ 1.16
BRF1-215ENST00000549655 PHKBQ93100 1093 aa22.32■■□□□ 1.16
BRF1-215ENST00000549655 NID2Q14112 1375 aa22.32■■□□□ 1.16
BRF1-215ENST00000549655 TNKSO95271 1327 aa22.32■■□□□ 1.16
BRF1-215ENST00000549655 BAG3O95817 575 aa22.32■■□□□ 1.16
BRF1-215ENST00000549655 SEC23AQ15436 765 aa22.32■■□□□ 1.16
BRF1-215ENST00000549655 SH3RF3Q8TEJ3 882 aaPredicted RBP22.32■■□□□ 1.16
BRF1-215ENST00000549655 GOLGA6L4A6NEF3 574 aa22.31■■□□□ 1.16
BRF1-215ENST00000549655 CYP2D6P10635 497 aa22.31■■□□□ 1.16
BRF1-215ENST00000549655 IARSP41252 1262 aaKnown RBP22.31■■□□□ 1.16
BRF1-215ENST00000549655 ZSCAN10Q96SZ4 725 aaPredicted RBP22.31■■□□□ 1.16
BRF1-215ENST00000549655 NOL10Q9BSC4 688 aaKnown RBP22.31■■□□□ 1.16
BRF1-215ENST00000549655 ALG1Q9BT22 464 aa22.31■■□□□ 1.16
BRF1-215ENST00000549655 RBSNQ9H1K0 784 aa22.31■■□□□ 1.16
BRF1-215ENST00000549655 GJB4Q9NTQ9 266 aa22.31■■□□□ 1.16
BRF1-215ENST00000549655 MCM9Q9NXL9 1143 aa22.31■■□□□ 1.16
BRF1-215ENST00000549655 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.31■■□□□ 1.16
BRF1-215ENST00000549655 LAMB1P07942 1786 aa22.31■■□□□ 1.16
BRF1-215ENST00000549655 MROH7-TTC4A0A0A0MT08 1334 aa22.31■■□□□ 1.16
BRF1-215ENST00000549655 SLC3A2P08195 630 aaKnown RBP22.3■■□□□ 1.16
BRF1-215ENST00000549655 USP5P45974 858 aa22.3■■□□□ 1.16
BRF1-215ENST00000549655 NASPP49321 788 aaPredicted RBP22.3■■□□□ 1.16
BRF1-215ENST00000549655 PPP4CP60510 307 aa22.3■■□□□ 1.16
BRF1-215ENST00000549655 MFSD14BQ5SR56 506 aa22.3■■□□□ 1.16
BRF1-215ENST00000549655 ATL3Q6DD88 541 aa22.3■■□□□ 1.16
BRF1-215ENST00000549655 RGS22Q8NE09 1264 aa22.3■■□□□ 1.16
BRF1-215ENST00000549655 MASTLQ96GX5 879 aa22.3■■□□□ 1.16
BRF1-215ENST00000549655 ZNF396Q96N95 335 aaPredicted RBP22.3■■□□□ 1.16
BRF1-215ENST00000549655 ORC4O43929 436 aa22.3■■□□□ 1.16
BRF1-215ENST00000549655 RCAN1P53805 252 aa22.3■■□□□ 1.16
BRF1-215ENST00000549655 CEBPZQ03701 1054 aaKnown RBP22.3■■□□□ 1.16
BRF1-215ENST00000549655 RTN1Q16799 776 aa22.3■■□□□ 1.16
BRF1-215ENST00000549655 OLFM4Q6UX06 510 aa22.3■■□□□ 1.16
BRF1-215ENST00000549655 ZNF654Q8IZM8 581 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms